RNA–Protein interactions for RNA: ENST00000372731.8

SPTAN1-202, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-202ENST00000372731 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
SPTAN1-202ENST00000372731 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
SPTAN1-202ENST00000372731 GOLGA3Q08378 1498 aa11.71□□□□□ -0.53
SPTAN1-202ENST00000372731 MSH5O43196 834 aa11.71□□□□□ -0.54
SPTAN1-202ENST00000372731 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.54
SPTAN1-202ENST00000372731 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.54
SPTAN1-202ENST00000372731 VPS53Q5VIR6 699 aa11.7□□□□□ -0.54
SPTAN1-202ENST00000372731 EID1Q9Y6B2 187 aa11.7□□□□□ -0.54
SPTAN1-202ENST00000372731 KIAA1211Q6ZU35 1233 aa11.69□□□□□ -0.54
SPTAN1-202ENST00000372731 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-202ENST00000372731 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
SPTAN1-202ENST00000372731 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
SPTAN1-202ENST00000372731 DRC7Q8IY82 874 aa11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 CHMP3Q9Y3E7 222 aa11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
SPTAN1-202ENST00000372731 CCDC34Q96HJ3 373 aa11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 TCEAL9Q9UHQ7 104 aa11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 FOXD1Q16676 465 aa11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
SPTAN1-202ENST00000372731 MARCH6O60337 910 aa11.64□□□□□ -0.55
SPTAN1-202ENST00000372731 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
SPTAN1-202ENST00000372731 A0A0U1RQG5 324 aaPredicted RBP11.64□□□□□ -0.55
SPTAN1-202ENST00000372731 EVA1CP58658 441 aa11.64□□□□□ -0.55
SPTAN1-202ENST00000372731 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
SPTAN1-202ENST00000372731 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-202ENST00000372731 TMF1P82094 1093 aa11.63□□□□□ -0.55
SPTAN1-202ENST00000372731 HTATSF1O43719 755 aaKnown RBP11.63□□□□□ -0.55
SPTAN1-202ENST00000372731 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
SPTAN1-202ENST00000372731 STK26Q9P289 416 aa11.63□□□□□ -0.55
SPTAN1-202ENST00000372731 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
SPTAN1-202ENST00000372731 TPM4P67936 248 aa11.62□□□□□ -0.55
SPTAN1-202ENST00000372731 PDE4CQ08493 712 aa11.62□□□□□ -0.55
SPTAN1-202ENST00000372731 GGT6Q6P531 493 aa11.61□□□□□ -0.55
SPTAN1-202ENST00000372731 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
SPTAN1-202ENST00000372731 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
SPTAN1-202ENST00000372731 KIF27Q86VH2 1401 aa11.61□□□□□ -0.55
SPTAN1-202ENST00000372731 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
SPTAN1-202ENST00000372731 HSCBQ8IWL3 235 aa11.6□□□□□ -0.55
SPTAN1-202ENST00000372731 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
SPTAN1-202ENST00000372731 RGS3P49796 1198 aa11.6□□□□□ -0.55
SPTAN1-202ENST00000372731 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
SPTAN1-202ENST00000372731 AMOTL1Q8IY63 956 aa11.59□□□□□ -0.55
SPTAN1-202ENST00000372731 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
SPTAN1-202ENST00000372731 SOGA1O94964 1423 aa11.58□□□□□ -0.56
SPTAN1-202ENST00000372731 HSP90B1P14625 803 aaKnown RBP11.57□□□□□ -0.56
SPTAN1-202ENST00000372731 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
SPTAN1-202ENST00000372731 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
SPTAN1-202ENST00000372731 NGDNQ8NEJ9 315 aaKnown RBP11.56□□□□□ -0.56
SPTAN1-202ENST00000372731 CUX2O14529 1486 aa11.55□□□□□ -0.56
SPTAN1-202ENST00000372731 USP35Q9P2H5 1018 aa11.55□□□□□ -0.56
SPTAN1-202ENST00000372731 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
SPTAN1-202ENST00000372731 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
SPTAN1-202ENST00000372731 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
SPTAN1-202ENST00000372731 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
SPTAN1-202ENST00000372731 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
SPTAN1-202ENST00000372731 CARMIL2Q6F5E8 1435 aa11.53□□□□□ -0.56
SPTAN1-202ENST00000372731 APBB1O00213 710 aa11.52□□□□□ -0.57
SPTAN1-202ENST00000372731 B4GALNT3Q6L9W6 998 aa11.52□□□□□ -0.57
SPTAN1-202ENST00000372731 RAD21O60216 631 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 AMPHP49418 695 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 CREBRFQ8IUR6 639 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 TNIKQ9UKE5 1360 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 WASHC2AQ641Q2 1341 aa11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 EIF3AQ14152 1382 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-202ENST00000372731 MSNP26038 577 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 NAP1L5Q96NT1 182 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 CARMIL1Q5VZK9 1371 aa11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 NACADO15069 1562 aa11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-202ENST00000372731 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
SPTAN1-202ENST00000372731 TPM2P07951 284 aa11.49□□□□□ -0.57
SPTAN1-202ENST00000372731 WWC1Q8IX03 1113 aa11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 EEA1Q15075 1411 aa11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 PTMSP20962 102 aa11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
SPTAN1-202ENST00000372731 HSPA5P11021 654 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-202ENST00000372731 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
SPTAN1-202ENST00000372731 VPS37DQ86XT2 251 aa11.47□□□□□ -0.57
SPTAN1-202ENST00000372731 TERF2IPQ9NYB0 399 aa11.47□□□□□ -0.57
SPTAN1-202ENST00000372731 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
SPTAN1-202ENST00000372731 NUTM2FA1L443 756 aa11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 PKD2Q13563 968 aa11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 HMMRO75330 724 aa11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 SYAP1Q96A49 352 aaPredicted RBP11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 KIF3AQ9Y496 699 aa11.46□□□□□ -0.57
SPTAN1-202ENST00000372731 TPM3P06753 285 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms