RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
SNX21-203ENST00000372541 ADAMTSL3P82987 1691 aa23.72■■□□□ 1.39
SNX21-203ENST00000372541 AKNAQ7Z591 1439 aa23.67■■□□□ 1.38
SNX21-203ENST00000372541 ARHGAP5Q13017 1502 aa23.67■■□□□ 1.38
SNX21-203ENST00000372541 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
SNX21-203ENST00000372541 MAP3K1Q13233 1512 aa23.64■■□□□ 1.38
SNX21-203ENST00000372541 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
SNX21-203ENST00000372541 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
SNX21-203ENST00000372541 DENND4BO75064 1496 aaPredicted RBP23.61■■□□□ 1.37
SNX21-203ENST00000372541 FRMPD1Q5SYB0 1578 aa23.61■■□□□ 1.37
SNX21-203ENST00000372541 CDC42BPBQ9Y5S2 1711 aa23.6■■□□□ 1.37
SNX21-203ENST00000372541 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
SNX21-203ENST00000372541 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
SNX21-203ENST00000372541 BCORL1Q5H9F3 1711 aa23.59■■□□□ 1.37
SNX21-203ENST00000372541 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
SNX21-203ENST00000372541 APLP2Q06481 763 aa23.59■■□□□ 1.37
SNX21-203ENST00000372541 SUPT6HQ7KZ85 1726 aaKnown RBP23.59■■□□□ 1.37
SNX21-203ENST00000372541 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.36
SNX21-203ENST00000372541 LMTK3Q96Q04 1460 aa23.57■■□□□ 1.36
SNX21-203ENST00000372541 SCAPERQ9BY12 1400 aa23.57■■□□□ 1.36
SNX21-203ENST00000372541 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
SNX21-203ENST00000372541 MADDQ8WXG6 1647 aa23.55■■□□□ 1.36
SNX21-203ENST00000372541 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
SNX21-203ENST00000372541 RICTORQ6R327 1708 aa23.55■■□□□ 1.36
SNX21-203ENST00000372541 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
SNX21-203ENST00000372541 ABCC1P33527 1531 aa23.52■■□□□ 1.36
SNX21-203ENST00000372541 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
SNX21-203ENST00000372541 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
SNX21-203ENST00000372541 ZMYM4Q5VZL5 1548 aa23.5■■□□□ 1.35
SNX21-203ENST00000372541 ZNF518AQ6AHZ1 1483 aa23.49■■□□□ 1.35
SNX21-203ENST00000372541 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
SNX21-203ENST00000372541 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
SNX21-203ENST00000372541 SAMD9LQ8IVG5 1584 aa23.48■■□□□ 1.35
SNX21-203ENST00000372541 PLEKHH2Q8IVE3 1493 aa23.45■■□□□ 1.34
SNX21-203ENST00000372541 HSPA2P54652 639 aa23.45■■□□□ 1.34
SNX21-203ENST00000372541 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
SNX21-203ENST00000372541 MAGI2Q86UL8 1455 aa23.44■■□□□ 1.34
SNX21-203ENST00000372541 KDM5CP41229 1560 aa23.44■■□□□ 1.34
SNX21-203ENST00000372541 ZFYVE16Q7Z3T8 1539 aa23.43■■□□□ 1.34
SNX21-203ENST00000372541 SYCP2Q9BX26 1530 aa23.43■■□□□ 1.34
SNX21-203ENST00000372541 RIMS1Q86UR5 1692 aaKnown RBP23.42■■□□□ 1.34
SNX21-203ENST00000372541 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
SNX21-203ENST00000372541 KIAA1107Q9UPP5 1409 aa23.41■■□□□ 1.34
SNX21-203ENST00000372541 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
SNX21-203ENST00000372541 AFAP1Q8N556 730 aa23.39■■□□□ 1.33
SNX21-203ENST00000372541 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
SNX21-203ENST00000372541 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
SNX21-203ENST00000372541 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
SNX21-203ENST00000372541 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
SNX21-203ENST00000372541 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX21-203ENST00000372541 CERKQ8TCT0 537 aa23.35■■□□□ 1.33
SNX21-203ENST00000372541 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
SNX21-203ENST00000372541 MLH3Q9UHC1 1453 aa23.34■■□□□ 1.33
SNX21-203ENST00000372541 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.33
SNX21-203ENST00000372541 MLECQ14165 292 aa23.33■■□□□ 1.33
SNX21-203ENST00000372541 MIA2Q96PC5 1412 aa23.33■■□□□ 1.32
SNX21-203ENST00000372541 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
SNX21-203ENST00000372541 ATP10AO60312 1499 aa23.3■■□□□ 1.32
SNX21-203ENST00000372541 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
SNX21-203ENST00000372541 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
SNX21-203ENST00000372541 CCDC141Q6ZP82 1450 aa23.28■■□□□ 1.32
SNX21-203ENST00000372541 SPAG9O60271 1321 aaKnown RBP23.28■■□□□ 1.32
SNX21-203ENST00000372541 ABCA6Q8N139 1617 aa23.27■■□□□ 1.32
SNX21-203ENST00000372541 INO80Q9ULG1 1556 aaPredicted RBP23.27■■□□□ 1.32
SNX21-203ENST00000372541 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
SNX21-203ENST00000372541 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
SNX21-203ENST00000372541 FGD6Q6ZV73 1430 aa23.25■■□□□ 1.31
SNX21-203ENST00000372541 ARHGEF5Q12774 1597 aa23.24■■□□□ 1.31
SNX21-203ENST00000372541 RSPH4AQ5TD94 716 aa23.23■■□□□ 1.31
SNX21-203ENST00000372541 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
SNX21-203ENST00000372541 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
SNX21-203ENST00000372541 CEBPAP49715 358 aaPredicted RBP23.21■■□□□ 1.31
SNX21-203ENST00000372541 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
SNX21-203ENST00000372541 RTEL1-TNFRSF6BF6WH68 1400 aa23.19■■□□□ 1.3
SNX21-203ENST00000372541 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
SNX21-203ENST00000372541 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
SNX21-203ENST00000372541 TSPY4P0CV99 314 aa23.15■■□□□ 1.3
SNX21-203ENST00000372541 TSPY10P0CW01 314 aa23.15■■□□□ 1.3
SNX21-203ENST00000372541 PPARGC1BQ86YN6 1023 aaKnown RBP23.15■■□□□ 1.3
SNX21-203ENST00000372541 AGLP35573 1532 aa23.13■■□□□ 1.29
SNX21-203ENST00000372541 ADGBQ8N7X0 1667 aa23.13■■□□□ 1.29
SNX21-203ENST00000372541 A2MP01023 1474 aa23.12■■□□□ 1.29
SNX21-203ENST00000372541 PLXNC1O60486 1568 aa23.12■■□□□ 1.29
SNX21-203ENST00000372541 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
SNX21-203ENST00000372541 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
SNX21-203ENST00000372541 DNMT1P26358 1616 aaKnown RBP23.1■■□□□ 1.29
SNX21-203ENST00000372541 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
SNX21-203ENST00000372541 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
SNX21-203ENST00000372541 DAPK1P53355 1430 aa23.08■■□□□ 1.29
SNX21-203ENST00000372541 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.29
SNX21-203ENST00000372541 ABCC5O15440 1437 aa23.08■■□□□ 1.28
SNX21-203ENST00000372541 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
SNX21-203ENST00000372541 STRCQ7RTU9 1775 aa23.06■■□□□ 1.28
SNX21-203ENST00000372541 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
SNX21-203ENST00000372541 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
SNX21-203ENST00000372541 PTPRTO14522 1441 aa23.03■■□□□ 1.28
SNX21-203ENST00000372541 DISP3Q9P2K9 1392 aa23.02■■□□□ 1.28
SNX21-203ENST00000372541 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
SNX21-203ENST00000372541 SOCS7O14512 581 aa22.98■■□□□ 1.27
SNX21-203ENST00000372541 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms