RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.64
TMEM53-203ENST00000372242 EFCAB2Q5VUJ9 269 aa25.32■■□□□ 1.64
TMEM53-203ENST00000372242 CFDP1Q9UEE9 299 aaPredicted RBP25.32■■□□□ 1.64
TMEM53-203ENST00000372242 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
TMEM53-203ENST00000372242 ZNF777Q9ULD5 760 aaPredicted RBP25.3■■□□□ 1.64
TMEM53-203ENST00000372242 ITSN2Q9NZM3 1697 aa25.3■■□□□ 1.64
TMEM53-203ENST00000372242 NEO1Q92859 1461 aa25.3■■□□□ 1.64
TMEM53-203ENST00000372242 AKNAQ7Z591 1439 aa25.28■■□□□ 1.64
TMEM53-203ENST00000372242 MYOM3Q5VTT5 1437 aa25.27■■□□□ 1.64
TMEM53-203ENST00000372242 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
TMEM53-203ENST00000372242 COL17A1Q9UMD9 1497 aaPredicted RBP25.25■■□□□ 1.63
TMEM53-203ENST00000372242 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
TMEM53-203ENST00000372242 ADGRL1O94910 1474 aa25.23■■□□□ 1.63
TMEM53-203ENST00000372242 SAMD9LQ8IVG5 1584 aa25.23■■□□□ 1.63
TMEM53-203ENST00000372242 KDM6BO15054 1643 aa25.22■■□□□ 1.63
TMEM53-203ENST00000372242 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.62
TMEM53-203ENST00000372242 RAPGEF3O95398 923 aa25.19■■□□□ 1.62
TMEM53-203ENST00000372242 MIA2Q96PC5 1412 aa25.18■■□□□ 1.62
TMEM53-203ENST00000372242 ABCC1P33527 1531 aa25.17■■□□□ 1.62
TMEM53-203ENST00000372242 FGD6Q6ZV73 1430 aa25.17■■□□□ 1.62
TMEM53-203ENST00000372242 ARHGEF12Q9NZN5 1544 aa25.17■■□□□ 1.62
TMEM53-203ENST00000372242 CAMSAP2Q08AD1 1489 aa25.16■■□□□ 1.62
TMEM53-203ENST00000372242 HNRNPMP52272 730 aaKnown RBP eCLIP25.16■■□□□ 1.62
TMEM53-203ENST00000372242 SYCP2Q9BX26 1530 aa25.15■■□□□ 1.62
TMEM53-203ENST00000372242 DENND4BO75064 1496 aaPredicted RBP25.15■■□□□ 1.62
TMEM53-203ENST00000372242 PTPN23Q9H3S7 1636 aa25.13■■□□□ 1.61
TMEM53-203ENST00000372242 PLEKHH2Q8IVE3 1493 aa25.12■■□□□ 1.61
TMEM53-203ENST00000372242 KIAA1107Q9UPP5 1409 aa25.11■■□□□ 1.61
TMEM53-203ENST00000372242 TRAPPC8Q9Y2L5 1435 aa25.11■■□□□ 1.61
TMEM53-203ENST00000372242 AFAP1Q8N556 730 aa25.11■■□□□ 1.61
TMEM53-203ENST00000372242 FRMPD1Q5SYB0 1578 aa25.11■■□□□ 1.61
TMEM53-203ENST00000372242 POGZQ7Z3K3 1410 aa25.1■■□□□ 1.61
TMEM53-203ENST00000372242 RICTORQ6R327 1708 aa25.1■■□□□ 1.61
TMEM53-203ENST00000372242 MBD5Q9P267 1494 aa25.08■■□□□ 1.61
TMEM53-203ENST00000372242 FAM50AQ14320 339 aaKnown RBP25.07■■□□□ 1.6
TMEM53-203ENST00000372242 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
TMEM53-203ENST00000372242 ZNF518AQ6AHZ1 1483 aa25.06■■□□□ 1.6
TMEM53-203ENST00000372242 KDM5CP41229 1560 aa25.01■■□□□ 1.59
TMEM53-203ENST00000372242 ARHGEF5Q12774 1597 aa25■■□□□ 1.59
TMEM53-203ENST00000372242 RRBP1Q9P2E9 1410 aaKnown RBP25■■□□□ 1.59
TMEM53-203ENST00000372242 CCDC141Q6ZP82 1450 aa25■■□□□ 1.59
TMEM53-203ENST00000372242 MYT1LQ9UL68 1186 aa24.99■■□□□ 1.59
TMEM53-203ENST00000372242 ZMYM4Q5VZL5 1548 aa24.99■■□□□ 1.59
TMEM53-203ENST00000372242 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
TMEM53-203ENST00000372242 SPAG9O60271 1321 aaKnown RBP24.96■■□□□ 1.59
TMEM53-203ENST00000372242 ABCC5O15440 1437 aa24.95■■□□□ 1.58
TMEM53-203ENST00000372242 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
TMEM53-203ENST00000372242 HECW2Q9P2P5 1572 aa24.95■■□□□ 1.58
TMEM53-203ENST00000372242 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
TMEM53-203ENST00000372242 DAPK1P53355 1430 aa24.93■■□□□ 1.58
TMEM53-203ENST00000372242 TSPY4P0CV99 314 aa24.93■■□□□ 1.58
TMEM53-203ENST00000372242 TSPY10P0CW01 314 aa24.93■■□□□ 1.58
TMEM53-203ENST00000372242 MLH3Q9UHC1 1453 aa24.93■■□□□ 1.58
TMEM53-203ENST00000372242 ITGAEP38570 1179 aa24.92■■□□□ 1.58
TMEM53-203ENST00000372242 MAGI2Q86UL8 1455 aa24.92■■□□□ 1.58
TMEM53-203ENST00000372242 KIDINS220Q9ULH0 1771 aa24.92■■□□□ 1.58
TMEM53-203ENST00000372242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.92■■□□□ 1.58
TMEM53-203ENST00000372242 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
TMEM53-203ENST00000372242 INO80Q9ULG1 1556 aaPredicted RBP24.9■■□□□ 1.58
TMEM53-203ENST00000372242 ATP7AQ04656 1500 aa24.9■■□□□ 1.58
TMEM53-203ENST00000372242 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
TMEM53-203ENST00000372242 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.57
TMEM53-203ENST00000372242 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
TMEM53-203ENST00000372242 ARHGEF40Q8TER5 1519 aa24.88■■□□□ 1.57
TMEM53-203ENST00000372242 ABCA6Q8N139 1617 aa24.87■■□□□ 1.57
TMEM53-203ENST00000372242 RTEL1-TNFRSF6BF6WH68 1400 aa24.86■■□□□ 1.57
TMEM53-203ENST00000372242 PTPRKQ15262 1439 aa24.86■■□□□ 1.57
TMEM53-203ENST00000372242 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
TMEM53-203ENST00000372242 MAST1Q9Y2H9 1570 aa24.85■■□□□ 1.57
TMEM53-203ENST00000372242 SHANK2Q9UPX8 1470 aa24.84■■□□□ 1.57
TMEM53-203ENST00000372242 ATP10AO60312 1499 aa24.82■■□□□ 1.56
TMEM53-203ENST00000372242 RRP7BPQ9NSQ0 103 aa24.78■■□□□ 1.56
TMEM53-203ENST00000372242 ADGBQ8N7X0 1667 aa24.78■■□□□ 1.56
TMEM53-203ENST00000372242 SIGLEC1Q9BZZ2 1709 aa24.77■■□□□ 1.56
TMEM53-203ENST00000372242 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
TMEM53-203ENST00000372242 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
TMEM53-203ENST00000372242 ANKRD30AQ9BXX3 1397 aa24.75■■□□□ 1.55
TMEM53-203ENST00000372242 ADGRL2O95490 1459 aa24.74■■□□□ 1.55
TMEM53-203ENST00000372242 A2MP01023 1474 aa24.74■■□□□ 1.55
TMEM53-203ENST00000372242 KIF15Q9NS87 1388 aa24.73■■□□□ 1.55
TMEM53-203ENST00000372242 ARID4BQ4LE39 1312 aaPredicted RBP24.73■■□□□ 1.55
TMEM53-203ENST00000372242 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
TMEM53-203ENST00000372242 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
TMEM53-203ENST00000372242 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
TMEM53-203ENST00000372242 DUOX2Q9NRD8 1548 aa24.68■■□□□ 1.54
TMEM53-203ENST00000372242 MLECQ14165 292 aa24.65■■□□□ 1.54
TMEM53-203ENST00000372242 AGLP35573 1532 aa24.64■■□□□ 1.54
TMEM53-203ENST00000372242 KIF3BO15066 747 aa24.63■■□□□ 1.53
TMEM53-203ENST00000372242 ANKRD50Q9ULJ7 1429 aa24.6■■□□□ 1.53
TMEM53-203ENST00000372242 TRIM26Q12899 539 aaPredicted RBP24.6■■□□□ 1.53
TMEM53-203ENST00000372242 ERBINQ96RT1 1412 aa24.6■■□□□ 1.53
TMEM53-203ENST00000372242 GGT6Q6P531 493 aa24.59■■□□□ 1.53
TMEM53-203ENST00000372242 NAIPQ13075 1403 aa24.58■■□□□ 1.53
TMEM53-203ENST00000372242 BCORL1Q5H9F3 1711 aa24.58■■□□□ 1.53
TMEM53-203ENST00000372242 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
TMEM53-203ENST00000372242 HFM1A2PYH4 1435 aa24.57■■□□□ 1.52
TMEM53-203ENST00000372242 GCC2Q8IWJ2 1684 aa24.55■■□□□ 1.52
TMEM53-203ENST00000372242 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
TMEM53-203ENST00000372242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.51■■□□□ 1.51
TMEM53-203ENST00000372242 ADAMTSL3P82987 1691 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms