RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 LRRIQ1Q96JM4 1722 aa30.42■■■□□ 2.46
TMEM53-201ENST00000372235 POGZQ7Z3K3 1410 aa30.41■■■□□ 2.46
TMEM53-201ENST00000372235 ARHGAP5Q13017 1502 aa30.4■■■□□ 2.46
TMEM53-201ENST00000372235 ZFYVE16Q7Z3T8 1539 aa30.38■■■□□ 2.45
TMEM53-201ENST00000372235 ADAMTSL3P82987 1691 aa30.34■■■□□ 2.45
TMEM53-201ENST00000372235 ZNF518AQ6AHZ1 1483 aa30.34■■■□□ 2.45
TMEM53-201ENST00000372235 BCORL1Q5H9F3 1711 aa30.33■■■□□ 2.45
TMEM53-201ENST00000372235 PTPRMP28827 1452 aa30.28■■■□□ 2.44
TMEM53-201ENST00000372235 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
TMEM53-201ENST00000372235 YEATS2Q9ULM3 1422 aa30.27■■■□□ 2.44
TMEM53-201ENST00000372235 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
TMEM53-201ENST00000372235 ATP10AO60312 1499 aa30.25■■■□□ 2.43
TMEM53-201ENST00000372235 CDC42BPBQ9Y5S2 1711 aa30.25■■■□□ 2.43
TMEM53-201ENST00000372235 HECW2Q9P2P5 1572 aa30.23■■■□□ 2.43
TMEM53-201ENST00000372235 C9orf84Q5VXU9 1444 aa30.22■■■□□ 2.43
TMEM53-201ENST00000372235 KDM5CP41229 1560 aa30.22■■■□□ 2.43
TMEM53-201ENST00000372235 MTUS2Q5JR59 1369 aa30.21■■■□□ 2.43
TMEM53-201ENST00000372235 MYT1LQ9UL68 1186 aa30.21■■■□□ 2.43
TMEM53-201ENST00000372235 AFAP1Q8N556 730 aa30.2■■■□□ 2.43
TMEM53-201ENST00000372235 MADDQ8WXG6 1647 aa30.19■■■□□ 2.42
TMEM53-201ENST00000372235 ABCC1P33527 1531 aa30.17■■■□□ 2.42
TMEM53-201ENST00000372235 MLH3Q9UHC1 1453 aa30.16■■■□□ 2.42
TMEM53-201ENST00000372235 CDC42BPAQ5VT25 1732 aa30.16■■■□□ 2.42
TMEM53-201ENST00000372235 CCNB3Q8WWL7 1395 aa30.14■■■□□ 2.41
TMEM53-201ENST00000372235 GPATCH8Q9UKJ3 1502 aaKnown RBP30.13■■■□□ 2.41
TMEM53-201ENST00000372235 PLEKHH2Q8IVE3 1493 aa30.12■■■□□ 2.41
TMEM53-201ENST00000372235 CFDP1Q9UEE9 299 aaPredicted RBP30.11■■■□□ 2.41
TMEM53-201ENST00000372235 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
TMEM53-201ENST00000372235 ITSN2Q9NZM3 1697 aa30.1■■■□□ 2.41
TMEM53-201ENST00000372235 RIMS1Q86UR5 1692 aaKnown RBP30.09■■■□□ 2.41
TMEM53-201ENST00000372235 EHBP1L1Q8N3D4 1523 aa30.09■■■□□ 2.41
TMEM53-201ENST00000372235 REREQ9P2R6 1566 aa30.08■■■□□ 2.41
TMEM53-201ENST00000372235 KIAA1107Q9UPP5 1409 aa30.07■■■□□ 2.4
TMEM53-201ENST00000372235 TRAPPC8Q9Y2L5 1435 aa30.07■■■□□ 2.4
TMEM53-201ENST00000372235 MLECQ14165 292 aa30.07■■■□□ 2.4
TMEM53-201ENST00000372235 ARHGEF12Q9NZN5 1544 aa30.06■■■□□ 2.4
TMEM53-201ENST00000372235 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
TMEM53-201ENST00000372235 SIGLEC1Q9BZZ2 1709 aa30.03■■■□□ 2.4
TMEM53-201ENST00000372235 FER1L4A9Z1Z3 1794 aa30.02■■■□□ 2.4
TMEM53-201ENST00000372235 SAMD9LQ8IVG5 1584 aa30.02■■■□□ 2.4
TMEM53-201ENST00000372235 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
TMEM53-201ENST00000372235 AGLP35573 1532 aa29.99■■■□□ 2.39
TMEM53-201ENST00000372235 SPAG9O60271 1321 aaKnown RBP29.98■■■□□ 2.39
TMEM53-201ENST00000372235 SYCP2Q9BX26 1530 aa29.98■■■□□ 2.39
TMEM53-201ENST00000372235 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
TMEM53-201ENST00000372235 ABCA6Q8N139 1617 aa29.97■■■□□ 2.39
TMEM53-201ENST00000372235 HNRNPMP52272 730 aaKnown RBP eCLIP29.96■■■□□ 2.39
TMEM53-201ENST00000372235 ESF1Q9H501 851 aaKnown RBP29.95■■■□□ 2.39
TMEM53-201ENST00000372235 KIDINS220Q9ULH0 1771 aa29.94■■■□□ 2.38
TMEM53-201ENST00000372235 TIAM1Q13009 1591 aa29.92■■■□□ 2.38
TMEM53-201ENST00000372235 SUPT6HQ7KZ85 1726 aaKnown RBP29.91■■■□□ 2.38
TMEM53-201ENST00000372235 LMTK3Q96Q04 1460 aa29.91■■■□□ 2.38
TMEM53-201ENST00000372235 PLPPR3Q6T4P5 718 aa29.9■■■□□ 2.38
TMEM53-201ENST00000372235 RSPH4AQ5TD94 716 aa29.88■■■□□ 2.37
TMEM53-201ENST00000372235 ATP7AQ04656 1500 aa29.86■■■□□ 2.37
TMEM53-201ENST00000372235 CNTLNQ9NXG0 1405 aa29.86■■■□□ 2.37
TMEM53-201ENST00000372235 NCOA2Q15596 1464 aa29.86■■■□□ 2.37
TMEM53-201ENST00000372235 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
TMEM53-201ENST00000372235 INO80Q9ULG1 1556 aaPredicted RBP29.82■■■□□ 2.36
TMEM53-201ENST00000372235 RTEL1-TNFRSF6BF6WH68 1400 aa29.81■■■□□ 2.36
TMEM53-201ENST00000372235 LRRC9Q6ZRR7 1453 aa29.8■■■□□ 2.36
TMEM53-201ENST00000372235 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
TMEM53-201ENST00000372235 A2MP01023 1474 aa29.79■■■□□ 2.36
TMEM53-201ENST00000372235 ZNF644Q9H582 1327 aaPredicted RBP29.78■■■□□ 2.36
TMEM53-201ENST00000372235 APLP2Q06481 763 aa29.77■■■□□ 2.36
TMEM53-201ENST00000372235 PREX1Q8TCU6 1659 aa29.76■■■□□ 2.36
TMEM53-201ENST00000372235 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
TMEM53-201ENST00000372235 PPP6R1Q9UPN7 881 aa29.76■■■□□ 2.35
TMEM53-201ENST00000372235 SETD1BQ9UPS6 1966 aaKnown RBP29.74■■■□□ 2.35
TMEM53-201ENST00000372235 ADGBQ8N7X0 1667 aa29.74■■■□□ 2.35
TMEM53-201ENST00000372235 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
TMEM53-201ENST00000372235 CAMSAP2Q08AD1 1489 aa29.73■■■□□ 2.35
TMEM53-201ENST00000372235 PLXNC1O60486 1568 aa29.73■■■□□ 2.35
TMEM53-201ENST00000372235 UHRF1BP1Q6BDS2 1440 aa29.72■■■□□ 2.35
TMEM53-201ENST00000372235 TSPY4P0CV99 314 aa29.7■■■□□ 2.35
TMEM53-201ENST00000372235 TSPY10P0CW01 314 aa29.7■■■□□ 2.35
TMEM53-201ENST00000372235 HSPA2P54652 639 aa29.7■■■□□ 2.35
TMEM53-201ENST00000372235 C3P01024 1663 aa29.68■■■□□ 2.34
TMEM53-201ENST00000372235 MROH2AA6NES4 1674 aa29.67■■■□□ 2.34
TMEM53-201ENST00000372235 DHX29Q7Z478 1369 aaKnown RBP29.66■■■□□ 2.34
TMEM53-201ENST00000372235 ARHGEF5Q12774 1597 aa29.65■■■□□ 2.34
TMEM53-201ENST00000372235 MIA2Q96PC5 1412 aa29.65■■■□□ 2.34
TMEM53-201ENST00000372235 NPATQ14207 1427 aa29.64■■■□□ 2.34
TMEM53-201ENST00000372235 ILDR1Q86SU0 546 aaPredicted RBP29.64■■■□□ 2.34
TMEM53-201ENST00000372235 DMRT2Q9Y5R5 561 aa29.64■■■□□ 2.34
TMEM53-201ENST00000372235 GGT6Q6P531 493 aa29.63■■■□□ 2.33
TMEM53-201ENST00000372235 ZMYM3Q14202 1370 aa29.63■■■□□ 2.33
TMEM53-201ENST00000372235 KANK4Q5T7N3 995 aaPredicted RBP29.62■■■□□ 2.33
TMEM53-201ENST00000372235 MYOM3Q5VTT5 1437 aa29.61■■■□□ 2.33
TMEM53-201ENST00000372235 FAM135AQ9P2D6 1515 aa29.55■■■□□ 2.32
TMEM53-201ENST00000372235 CLTCQ00610 1675 aaKnown RBP29.53■■■□□ 2.32
TMEM53-201ENST00000372235 KIF3BO15066 747 aa29.52■■■□□ 2.32
TMEM53-201ENST00000372235 FBXO41Q8TF61 875 aa29.51■■■□□ 2.31
TMEM53-201ENST00000372235 MAST1Q9Y2H9 1570 aa29.5■■■□□ 2.31
TMEM53-201ENST00000372235 PTPRKQ15262 1439 aa29.45■■■□□ 2.3
TMEM53-201ENST00000372235 WASHC2CQ9Y4E1 1318 aa29.44■■■□□ 2.3
TMEM53-201ENST00000372235 KDM5DQ9BY66 1539 aa29.43■■■□□ 2.3
TMEM53-201ENST00000372235 PTPRTO14522 1441 aa29.42■■■□□ 2.3
TMEM53-201ENST00000372235 STRCQ7RTU9 1775 aa29.4■■■□□ 2.3
TMEM53-201ENST00000372235 NCOA1Q15788 1441 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms