RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ZFYVE16Q7Z3T8 1539 aa26.26■■□□□ 1.79
VMA21-202ENST00000370361 FYCO1Q9BQS8 1478 aa26.25■■□□□ 1.79
VMA21-202ENST00000370361 SCAPERQ9BY12 1400 aa26.25■■□□□ 1.79
VMA21-202ENST00000370361 ARID4BQ4LE39 1312 aaPredicted RBP26.25■■□□□ 1.79
VMA21-202ENST00000370361 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
VMA21-202ENST00000370361 PTPRMP28827 1452 aa26.23■■□□□ 1.79
VMA21-202ENST00000370361 LRRIQ1Q96JM4 1722 aa26.23■■□□□ 1.79
VMA21-202ENST00000370361 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
VMA21-202ENST00000370361 ZNF518AQ6AHZ1 1483 aa26.19■■□□□ 1.78
VMA21-202ENST00000370361 MADDQ8WXG6 1647 aa26.17■■□□□ 1.78
VMA21-202ENST00000370361 YEATS2Q9ULM3 1422 aa26.15■■□□□ 1.78
VMA21-202ENST00000370361 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
VMA21-202ENST00000370361 ATP10AO60312 1499 aa26.13■■□□□ 1.77
VMA21-202ENST00000370361 KDM5CP41229 1560 aa26.12■■□□□ 1.77
VMA21-202ENST00000370361 C9orf84Q5VXU9 1444 aa26.12■■□□□ 1.77
VMA21-202ENST00000370361 CDC42BPBQ9Y5S2 1711 aa26.1■■□□□ 1.77
VMA21-202ENST00000370361 RIMS1Q86UR5 1692 aaKnown RBP26.07■■□□□ 1.76
VMA21-202ENST00000370361 ABCC1P33527 1531 aa26.04■■□□□ 1.76
VMA21-202ENST00000370361 MLH3Q9UHC1 1453 aa26.04■■□□□ 1.76
VMA21-202ENST00000370361 REREQ9P2R6 1566 aa26.03■■□□□ 1.76
VMA21-202ENST00000370361 CDC42BPAQ5VT25 1732 aa26.02■■□□□ 1.76
VMA21-202ENST00000370361 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
VMA21-202ENST00000370361 FER1L4A9Z1Z3 1794 aa26.01■■□□□ 1.75
VMA21-202ENST00000370361 ARHGEF12Q9NZN5 1544 aa26.01■■□□□ 1.75
VMA21-202ENST00000370361 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
VMA21-202ENST00000370361 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
VMA21-202ENST00000370361 DIP2CQ9Y2E4 1556 aa25.96■■□□□ 1.75
VMA21-202ENST00000370361 LMTK3Q96Q04 1460 aa25.96■■□□□ 1.75
VMA21-202ENST00000370361 MYT1LQ9UL68 1186 aa25.95■■□□□ 1.74
VMA21-202ENST00000370361 PLEKHH2Q8IVE3 1493 aa25.95■■□□□ 1.74
VMA21-202ENST00000370361 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
VMA21-202ENST00000370361 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
VMA21-202ENST00000370361 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
VMA21-202ENST00000370361 TRAPPC8Q9Y2L5 1435 aa25.93■■□□□ 1.74
VMA21-202ENST00000370361 AGLP35573 1532 aa25.93■■□□□ 1.74
VMA21-202ENST00000370361 MLECQ14165 292 aa25.92■■□□□ 1.74
VMA21-202ENST00000370361 KIAA1107Q9UPP5 1409 aa25.91■■□□□ 1.74
VMA21-202ENST00000370361 ABCA6Q8N139 1617 aa25.91■■□□□ 1.74
VMA21-202ENST00000370361 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
VMA21-202ENST00000370361 CCNB3Q8WWL7 1395 aa25.89■■□□□ 1.74
VMA21-202ENST00000370361 SAMD9LQ8IVG5 1584 aa25.89■■□□□ 1.73
VMA21-202ENST00000370361 CFDP1Q9UEE9 299 aaPredicted RBP25.86■■□□□ 1.73
VMA21-202ENST00000370361 KIDINS220Q9ULH0 1771 aa25.86■■□□□ 1.73
VMA21-202ENST00000370361 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
VMA21-202ENST00000370361 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
VMA21-202ENST00000370361 ZNF777Q9ULD5 760 aaPredicted RBP25.83■■□□□ 1.73
VMA21-202ENST00000370361 PREX1Q8TCU6 1659 aa25.8■■□□□ 1.72
VMA21-202ENST00000370361 CNTLNQ9NXG0 1405 aa25.8■■□□□ 1.72
VMA21-202ENST00000370361 SPAG9O60271 1321 aaKnown RBP25.8■■□□□ 1.72
VMA21-202ENST00000370361 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
VMA21-202ENST00000370361 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
VMA21-202ENST00000370361 TIAM1Q13009 1591 aa25.78■■□□□ 1.72
VMA21-202ENST00000370361 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
VMA21-202ENST00000370361 PLPPR3Q6T4P5 718 aa25.76■■□□□ 1.71
VMA21-202ENST00000370361 INO80Q9ULG1 1556 aaPredicted RBP25.76■■□□□ 1.71
VMA21-202ENST00000370361 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.71
VMA21-202ENST00000370361 SUPT6HQ7KZ85 1726 aaKnown RBP25.73■■□□□ 1.71
VMA21-202ENST00000370361 UHRF1BP1Q6BDS2 1440 aa25.72■■□□□ 1.71
VMA21-202ENST00000370361 PLXNC1O60486 1568 aa25.7■■□□□ 1.71
VMA21-202ENST00000370361 C3P01024 1663 aa25.7■■□□□ 1.7
VMA21-202ENST00000370361 VPS8Q8N3P4 1428 aa25.7■■□□□ 1.7
VMA21-202ENST00000370361 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
VMA21-202ENST00000370361 HSPA2P54652 639 aa25.69■■□□□ 1.7
VMA21-202ENST00000370361 RTEL1-TNFRSF6BF6WH68 1400 aa25.69■■□□□ 1.7
VMA21-202ENST00000370361 A2MP01023 1474 aa25.68■■□□□ 1.7
VMA21-202ENST00000370361 ADGBQ8N7X0 1667 aa25.68■■□□□ 1.7
VMA21-202ENST00000370361 CEBPAP49715 358 aaPredicted RBP25.67■■□□□ 1.7
VMA21-202ENST00000370361 RSPH4AQ5TD94 716 aa25.67■■□□□ 1.7
VMA21-202ENST00000370361 NCOA2Q15596 1464 aa25.66■■□□□ 1.7
VMA21-202ENST00000370361 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
VMA21-202ENST00000370361 FBXO41Q8TF61 875 aa25.66■■□□□ 1.7
VMA21-202ENST00000370361 PPP6R1Q9UPN7 881 aa25.65■■□□□ 1.7
VMA21-202ENST00000370361 NPATQ14207 1427 aa25.64■■□□□ 1.7
VMA21-202ENST00000370361 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
VMA21-202ENST00000370361 DMRT2Q9Y5R5 561 aa25.63■■□□□ 1.69
VMA21-202ENST00000370361 CCDC141Q6ZP82 1450 aa25.6■■□□□ 1.69
VMA21-202ENST00000370361 ZNF644Q9H582 1327 aaPredicted RBP25.59■■□□□ 1.69
VMA21-202ENST00000370361 LRRC9Q6ZRR7 1453 aa25.59■■□□□ 1.69
VMA21-202ENST00000370361 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
VMA21-202ENST00000370361 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
VMA21-202ENST00000370361 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
VMA21-202ENST00000370361 FAM135AQ9P2D6 1515 aa25.55■■□□□ 1.68
VMA21-202ENST00000370361 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
VMA21-202ENST00000370361 DHX29Q7Z478 1369 aaKnown RBP25.54■■□□□ 1.68
VMA21-202ENST00000370361 CLTCQ00610 1675 aaKnown RBP25.52■■□□□ 1.68
VMA21-202ENST00000370361 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
VMA21-202ENST00000370361 PTPRTO14522 1441 aa25.49■■□□□ 1.67
VMA21-202ENST00000370361 MIA2Q96PC5 1412 aa25.48■■□□□ 1.67
VMA21-202ENST00000370361 TSPY4P0CV99 314 aa25.48■■□□□ 1.67
VMA21-202ENST00000370361 TSPY10P0CW01 314 aa25.48■■□□□ 1.67
VMA21-202ENST00000370361 GGT6Q6P531 493 aa25.48■■□□□ 1.67
VMA21-202ENST00000370361 CERKQ8TCT0 537 aa25.44■■□□□ 1.66
VMA21-202ENST00000370361 ZNF142P52746 1687 aaPredicted RBP25.44■■□□□ 1.66
VMA21-202ENST00000370361 PTPRKQ15262 1439 aa25.44■■□□□ 1.66
VMA21-202ENST00000370361 NCOA1Q15788 1441 aa25.44■■□□□ 1.66
VMA21-202ENST00000370361 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
VMA21-202ENST00000370361 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
VMA21-202ENST00000370361 APLP2Q06481 763 aa25.41■■□□□ 1.66
VMA21-202ENST00000370361 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
VMA21-202ENST00000370361 MYO3AQ8NEV4 1616 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms