RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 ZNF644Q9H582 1327 aaPredicted RBP26.05■■□□□ 1.76
UBE3D-203ENST00000369747 PTPN23Q9H3S7 1636 aa26.05■■□□□ 1.76
UBE3D-203ENST00000369747 DIP2BQ9P265 1576 aa26.03■■□□□ 1.76
UBE3D-203ENST00000369747 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
UBE3D-203ENST00000369747 PLCH2O75038 1416 aa26.03■■□□□ 1.76
UBE3D-203ENST00000369747 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
UBE3D-203ENST00000369747 ARHGAP5Q13017 1502 aa26■■□□□ 1.75
UBE3D-203ENST00000369747 CD109Q6YHK3 1445 aa25.99■■□□□ 1.75
UBE3D-203ENST00000369747 TCOF1Q13428 1488 aaKnown RBP25.99■■□□□ 1.75
UBE3D-203ENST00000369747 GLI2P10070 1586 aa25.98■■□□□ 1.75
UBE3D-203ENST00000369747 CAMSAP2Q08AD1 1489 aa25.96■■□□□ 1.75
UBE3D-203ENST00000369747 ITGAEP38570 1179 aa25.96■■□□□ 1.75
UBE3D-203ENST00000369747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.75
UBE3D-203ENST00000369747 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.74
UBE3D-203ENST00000369747 MAP3K4Q9Y6R4 1608 aa25.94■■□□□ 1.74
UBE3D-203ENST00000369747 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
UBE3D-203ENST00000369747 ARAP3Q8WWN8 1544 aa25.93■■□□□ 1.74
UBE3D-203ENST00000369747 EFCAB2Q5VUJ9 269 aa25.93■■□□□ 1.74
UBE3D-203ENST00000369747 FANCAO15360 1455 aa25.91■■□□□ 1.74
UBE3D-203ENST00000369747 HNRNPMP52272 730 aaKnown RBP eCLIP25.87■■□□□ 1.73
UBE3D-203ENST00000369747 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
UBE3D-203ENST00000369747 PTPRKQ15262 1439 aa25.85■■□□□ 1.73
UBE3D-203ENST00000369747 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
UBE3D-203ENST00000369747 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
UBE3D-203ENST00000369747 MBD5Q9P267 1494 aa25.83■■□□□ 1.73
UBE3D-203ENST00000369747 DNMT1P26358 1616 aaKnown RBP25.82■■□□□ 1.72
UBE3D-203ENST00000369747 ABCC5O15440 1437 aa25.82■■□□□ 1.72
UBE3D-203ENST00000369747 ABCC1P33527 1531 aa25.82■■□□□ 1.72
UBE3D-203ENST00000369747 DAPK1P53355 1430 aa25.81■■□□□ 1.72
UBE3D-203ENST00000369747 PPRC1Q5VV67 1664 aaKnown RBP25.81■■□□□ 1.72
UBE3D-203ENST00000369747 TRHP20396 242 aaPredicted RBP25.81■■□□□ 1.72
UBE3D-203ENST00000369747 AKNAQ7Z591 1439 aa25.81■■□□□ 1.72
UBE3D-203ENST00000369747 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
UBE3D-203ENST00000369747 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
UBE3D-203ENST00000369747 ADGRL1O94910 1474 aa25.79■■□□□ 1.72
UBE3D-203ENST00000369747 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
UBE3D-203ENST00000369747 CFAP74Q9C0B2 1584 aa25.77■■□□□ 1.72
UBE3D-203ENST00000369747 ARHGEF5Q12774 1597 aa25.76■■□□□ 1.71
UBE3D-203ENST00000369747 NEO1Q92859 1461 aa25.76■■□□□ 1.71
UBE3D-203ENST00000369747 SCAPERQ9BY12 1400 aa25.76■■□□□ 1.71
UBE3D-203ENST00000369747 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
UBE3D-203ENST00000369747 CCDC141Q6ZP82 1450 aa25.74■■□□□ 1.71
UBE3D-203ENST00000369747 CROCC2H7BZ55 1655 aa25.73■■□□□ 1.71
UBE3D-203ENST00000369747 AFAP1Q8N556 730 aa25.73■■□□□ 1.71
UBE3D-203ENST00000369747 TEX14Q8IWB6 1497 aa25.71■■□□□ 1.71
UBE3D-203ENST00000369747 RSPH4AQ5TD94 716 aa25.71■■□□□ 1.71
UBE3D-203ENST00000369747 TSPY4P0CV99 314 aa25.69■■□□□ 1.7
UBE3D-203ENST00000369747 TSPY10P0CW01 314 aa25.69■■□□□ 1.7
UBE3D-203ENST00000369747 C9orf84Q5VXU9 1444 aa25.68■■□□□ 1.7
UBE3D-203ENST00000369747 RRP7BPQ9NSQ0 103 aa25.67■■□□□ 1.7
UBE3D-203ENST00000369747 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
UBE3D-203ENST00000369747 RAPGEF3O95398 923 aa25.65■■□□□ 1.7
UBE3D-203ENST00000369747 POGZQ7Z3K3 1410 aa25.64■■□□□ 1.69
UBE3D-203ENST00000369747 NCOA1Q15788 1441 aa25.62■■□□□ 1.69
UBE3D-203ENST00000369747 DENND4BO75064 1496 aaPredicted RBP25.62■■□□□ 1.69
UBE3D-203ENST00000369747 ZNF518AQ6AHZ1 1483 aa25.62■■□□□ 1.69
UBE3D-203ENST00000369747 ROCK1Q13464 1354 aa25.62■■□□□ 1.69
UBE3D-203ENST00000369747 ADGBQ8N7X0 1667 aa25.61■■□□□ 1.69
UBE3D-203ENST00000369747 HFM1A2PYH4 1435 aa25.61■■□□□ 1.69
UBE3D-203ENST00000369747 ADGRL2O95490 1459 aa25.6■■□□□ 1.69
UBE3D-203ENST00000369747 SPAG9O60271 1321 aaKnown RBP25.6■■□□□ 1.69
UBE3D-203ENST00000369747 NAIPQ13075 1403 aa25.6■■□□□ 1.69
UBE3D-203ENST00000369747 MAST1Q9Y2H9 1570 aa25.59■■□□□ 1.69
UBE3D-203ENST00000369747 COL17A1Q9UMD9 1497 aaPredicted RBP25.58■■□□□ 1.69
UBE3D-203ENST00000369747 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
UBE3D-203ENST00000369747 RICTORQ6R327 1708 aa25.58■■□□□ 1.69
UBE3D-203ENST00000369747 SETD5Q9C0A6 1442 aa25.58■■□□□ 1.69
UBE3D-203ENST00000369747 KDM5CP41229 1560 aa25.57■■□□□ 1.68
UBE3D-203ENST00000369747 ZFYVE16Q7Z3T8 1539 aa25.56■■□□□ 1.68
UBE3D-203ENST00000369747 FRMPD1Q5SYB0 1578 aa25.55■■□□□ 1.68
UBE3D-203ENST00000369747 RAB3GAP2Q9H2M9 1393 aa25.55■■□□□ 1.68
UBE3D-203ENST00000369747 INO80Q9ULG1 1556 aaPredicted RBP25.54■■□□□ 1.68
UBE3D-203ENST00000369747 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
UBE3D-203ENST00000369747 MYT1LQ9UL68 1186 aa25.53■■□□□ 1.68
UBE3D-203ENST00000369747 GCC2Q8IWJ2 1684 aa25.53■■□□□ 1.68
UBE3D-203ENST00000369747 DHX57Q6P158 1386 aaKnown RBP25.53■■□□□ 1.68
UBE3D-203ENST00000369747 RTEL1-TNFRSF6BF6WH68 1400 aa25.53■■□□□ 1.68
UBE3D-203ENST00000369747 KIF15Q9NS87 1388 aa25.52■■□□□ 1.68
UBE3D-203ENST00000369747 KIDINS220Q9ULH0 1771 aa25.52■■□□□ 1.68
UBE3D-203ENST00000369747 KDM6BO15054 1643 aa25.51■■□□□ 1.67
UBE3D-203ENST00000369747 PLXNC1O60486 1568 aa25.51■■□□□ 1.67
UBE3D-203ENST00000369747 HECW2Q9P2P5 1572 aa25.49■■□□□ 1.67
UBE3D-203ENST00000369747 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
UBE3D-203ENST00000369747 CLSPNQ9HAW4 1339 aa25.46■■□□□ 1.67
UBE3D-203ENST00000369747 ANKRD50Q9ULJ7 1429 aa25.45■■□□□ 1.67
UBE3D-203ENST00000369747 ZMYM4Q5VZL5 1548 aa25.44■■□□□ 1.66
UBE3D-203ENST00000369747 YEATS2Q9ULM3 1422 aa25.42■■□□□ 1.66
UBE3D-203ENST00000369747 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
UBE3D-203ENST00000369747 DUOX2Q9NRD8 1548 aa25.41■■□□□ 1.66
UBE3D-203ENST00000369747 DIP2CQ9Y2E4 1556 aa25.37■■□□□ 1.65
UBE3D-203ENST00000369747 MAGI2Q86UL8 1455 aa25.36■■□□□ 1.65
UBE3D-203ENST00000369747 DHX29Q7Z478 1369 aaKnown RBP25.35■■□□□ 1.65
UBE3D-203ENST00000369747 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
UBE3D-203ENST00000369747 A2MP01023 1474 aa25.34■■□□□ 1.65
UBE3D-203ENST00000369747 TRIM52Q96A61 297 aa25.32■■□□□ 1.64
UBE3D-203ENST00000369747 KIF3BO15066 747 aa25.27■■□□□ 1.64
UBE3D-203ENST00000369747 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
UBE3D-203ENST00000369747 ATP10AO60312 1499 aa25.27■■□□□ 1.64
UBE3D-203ENST00000369747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.25■■□□□ 1.63
UBE3D-203ENST00000369747 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms