RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 EFCAB2Q5VUJ9 269 aa32.99■■■□□ 2.87
SMNDC1-201ENST00000369592 ZMYM4Q5VZL5 1548 aa32.98■■■□□ 2.87
SMNDC1-201ENST00000369592 PREX2Q70Z35 1606 aa32.96■■■□□ 2.87
SMNDC1-201ENST00000369592 SCAPERQ9BY12 1400 aa32.95■■■□□ 2.87
SMNDC1-201ENST00000369592 CDC42BPAQ5VT25 1732 aa32.94■■■□□ 2.86
SMNDC1-201ENST00000369592 POGZQ7Z3K3 1410 aa32.94■■■□□ 2.86
SMNDC1-201ENST00000369592 ARHGAP5Q13017 1502 aa32.92■■■□□ 2.86
SMNDC1-201ENST00000369592 ARHGEF40Q8TER5 1519 aa32.91■■■□□ 2.86
SMNDC1-201ENST00000369592 MAGI2Q86UL8 1455 aa32.87■■■□□ 2.85
SMNDC1-201ENST00000369592 VPS8Q8N3P4 1428 aa32.87■■■□□ 2.85
SMNDC1-201ENST00000369592 GPATCH8Q9UKJ3 1502 aaKnown RBP32.86■■■□□ 2.85
SMNDC1-201ENST00000369592 FBXO41Q8TF61 875 aa32.85■■■□□ 2.85
SMNDC1-201ENST00000369592 MTUS2Q5JR59 1369 aa32.83■■■□□ 2.85
SMNDC1-201ENST00000369592 KDM5CP41229 1560 aa32.82■■■□□ 2.84
SMNDC1-201ENST00000369592 ABCC1P33527 1531 aa32.82■■■□□ 2.84
SMNDC1-201ENST00000369592 EHBP1L1Q8N3D4 1523 aa32.82■■■□□ 2.84
SMNDC1-201ENST00000369592 YEATS2Q9ULM3 1422 aa32.81■■■□□ 2.84
SMNDC1-201ENST00000369592 ZFYVE16Q7Z3T8 1539 aa32.81■■■□□ 2.84
SMNDC1-201ENST00000369592 ARHGEF12Q9NZN5 1544 aa32.81■■■□□ 2.84
SMNDC1-201ENST00000369592 ZNF518AQ6AHZ1 1483 aa32.79■■■□□ 2.84
SMNDC1-201ENST00000369592 TIAM1Q13009 1591 aa32.77■■■□□ 2.84
SMNDC1-201ENST00000369592 ADAMTSL3P82987 1691 aa32.77■■■□□ 2.84
SMNDC1-201ENST00000369592 SIGLEC1Q9BZZ2 1709 aa32.76■■■□□ 2.83
SMNDC1-201ENST00000369592 ITSN2Q9NZM3 1697 aa32.75■■■□□ 2.83
SMNDC1-201ENST00000369592 SAMD9LQ8IVG5 1584 aa32.75■■■□□ 2.83
SMNDC1-201ENST00000369592 BCORL1Q5H9F3 1711 aa32.74■■■□□ 2.83
SMNDC1-201ENST00000369592 AFAP1Q8N556 730 aa32.73■■■□□ 2.83
SMNDC1-201ENST00000369592 TRAPPC8Q9Y2L5 1435 aa32.72■■■□□ 2.83
SMNDC1-201ENST00000369592 MAP3K1Q13233 1512 aa32.71■■■□□ 2.83
SMNDC1-201ENST00000369592 CCNB3Q8WWL7 1395 aa32.7■■■□□ 2.83
SMNDC1-201ENST00000369592 MLH3Q9UHC1 1453 aa32.68■■■□□ 2.82
SMNDC1-201ENST00000369592 ATP10AO60312 1499 aa32.67■■■□□ 2.82
SMNDC1-201ENST00000369592 KIAA1107Q9UPP5 1409 aa32.65■■■□□ 2.82
SMNDC1-201ENST00000369592 SUPT6HQ7KZ85 1726 aaKnown RBP32.63■■■□□ 2.81
SMNDC1-201ENST00000369592 LRRC9Q6ZRR7 1453 aa32.63■■■□□ 2.81
SMNDC1-201ENST00000369592 CFDP1Q9UEE9 299 aaPredicted RBP32.63■■■□□ 2.81
SMNDC1-201ENST00000369592 NCOA2Q15596 1464 aa32.62■■■□□ 2.81
SMNDC1-201ENST00000369592 DIP2CQ9Y2E4 1556 aa32.62■■■□□ 2.81
SMNDC1-201ENST00000369592 SYCP2Q9BX26 1530 aa32.61■■■□□ 2.81
SMNDC1-201ENST00000369592 C9orf84Q5VXU9 1444 aa32.61■■■□□ 2.81
SMNDC1-201ENST00000369592 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
SMNDC1-201ENST00000369592 REREQ9P2R6 1566 aa32.59■■■□□ 2.81
SMNDC1-201ENST00000369592 KIDINS220Q9ULH0 1771 aa32.59■■■□□ 2.81
SMNDC1-201ENST00000369592 PTPRMP28827 1452 aa32.59■■■□□ 2.81
SMNDC1-201ENST00000369592 ABCA6Q8N139 1617 aa32.59■■■□□ 2.81
SMNDC1-201ENST00000369592 ARID4BQ4LE39 1312 aaPredicted RBP32.58■■■□□ 2.81
SMNDC1-201ENST00000369592 ZNF777Q9ULD5 760 aaPredicted RBP32.58■■■□□ 2.81
SMNDC1-201ENST00000369592 MADDQ8WXG6 1647 aa32.58■■■□□ 2.81
SMNDC1-201ENST00000369592 HNRNPMP52272 730 aaKnown RBP eCLIP32.54■■■□□ 2.8
SMNDC1-201ENST00000369592 KANK4Q5T7N3 995 aaPredicted RBP32.54■■■□□ 2.8
SMNDC1-201ENST00000369592 MBD5Q9P267 1494 aa32.53■■■□□ 2.8
SMNDC1-201ENST00000369592 ZNF644Q9H582 1327 aaPredicted RBP32.52■■■□□ 2.8
SMNDC1-201ENST00000369592 INO80Q9ULG1 1556 aaPredicted RBP32.47■■■□□ 2.79
SMNDC1-201ENST00000369592 AGLP35573 1532 aa32.46■■■□□ 2.79
SMNDC1-201ENST00000369592 RIMS1Q86UR5 1692 aaKnown RBP32.46■■■□□ 2.79
SMNDC1-201ENST00000369592 SPAG9O60271 1321 aaKnown RBP32.43■■■□□ 2.78
SMNDC1-201ENST00000369592 ATP7AQ04656 1500 aa32.42■■■□□ 2.78
SMNDC1-201ENST00000369592 CAMSAP2Q08AD1 1489 aa32.41■■■□□ 2.78
SMNDC1-201ENST00000369592 LMTK3Q96Q04 1460 aa32.41■■■□□ 2.78
SMNDC1-201ENST00000369592 FER1L4A9Z1Z3 1794 aa32.4■■■□□ 2.78
SMNDC1-201ENST00000369592 MYT1LQ9UL68 1186 aa32.39■■■□□ 2.78
SMNDC1-201ENST00000369592 MLECQ14165 292 aa32.36■■■□□ 2.77
SMNDC1-201ENST00000369592 RTEL1-TNFRSF6BF6WH68 1400 aa32.34■■■□□ 2.77
SMNDC1-201ENST00000369592 PLXNC1O60486 1568 aa32.34■■■□□ 2.77
SMNDC1-201ENST00000369592 MYOM3Q5VTT5 1437 aa32.34■■■□□ 2.77
SMNDC1-201ENST00000369592 ARHGEF5Q12774 1597 aa32.33■■■□□ 2.77
SMNDC1-201ENST00000369592 MIA2Q96PC5 1412 aa32.33■■■□□ 2.77
SMNDC1-201ENST00000369592 CCDC141Q6ZP82 1450 aa32.32■■■□□ 2.76
SMNDC1-201ENST00000369592 RSPH4AQ5TD94 716 aa32.31■■■□□ 2.76
SMNDC1-201ENST00000369592 APLP2Q06481 763 aa32.28■■■□□ 2.76
SMNDC1-201ENST00000369592 A2MP01023 1474 aa32.28■■■□□ 2.76
SMNDC1-201ENST00000369592 ADGBQ8N7X0 1667 aa32.27■■■□□ 2.76
SMNDC1-201ENST00000369592 HSPA2P54652 639 aa32.2■■■□□ 2.75
SMNDC1-201ENST00000369592 MAST1Q9Y2H9 1570 aa32.18■■■□□ 2.74
SMNDC1-201ENST00000369592 DHX29Q7Z478 1369 aaKnown RBP32.17■■■□□ 2.74
SMNDC1-201ENST00000369592 C3P01024 1663 aa32.13■■■□□ 2.73
SMNDC1-201ENST00000369592 PLPPR3Q6T4P5 718 aa32.13■■■□□ 2.73
SMNDC1-201ENST00000369592 PTPN23Q9H3S7 1636 aa32.13■■■□□ 2.73
SMNDC1-201ENST00000369592 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
SMNDC1-201ENST00000369592 FGD6Q6ZV73 1430 aa32.12■■■□□ 2.73
SMNDC1-201ENST00000369592 CNTLNQ9NXG0 1405 aa32.12■■■□□ 2.73
SMNDC1-201ENST00000369592 CEBPAP49715 358 aaPredicted RBP32.12■■■□□ 2.73
SMNDC1-201ENST00000369592 SETD1BQ9UPS6 1966 aaKnown RBP32.12■■■□□ 2.73
SMNDC1-201ENST00000369592 MROH2AA6NES4 1674 aa32.1■■■□□ 2.73
SMNDC1-201ENST00000369592 TSPY4P0CV99 314 aa32.09■■■□□ 2.73
SMNDC1-201ENST00000369592 TSPY10P0CW01 314 aa32.09■■■□□ 2.73
SMNDC1-201ENST00000369592 CERKQ8TCT0 537 aa32.09■■■□□ 2.73
SMNDC1-201ENST00000369592 PPP6R1Q9UPN7 881 aa32.05■■■□□ 2.72
SMNDC1-201ENST00000369592 ABCC5O15440 1437 aa32.05■■■□□ 2.72
SMNDC1-201ENST00000369592 PREX1Q8TCU6 1659 aa32.04■■■□□ 2.72
SMNDC1-201ENST00000369592 CROCC2H7BZ55 1655 aa32.03■■■□□ 2.72
SMNDC1-201ENST00000369592 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
SMNDC1-201ENST00000369592 DNMT1P26358 1616 aaKnown RBP32.01■■■□□ 2.72
SMNDC1-201ENST00000369592 CLTCQ00610 1675 aaKnown RBP32.01■■■□□ 2.71
SMNDC1-201ENST00000369592 ZMYM3Q14202 1370 aa31.99■■■□□ 2.71
SMNDC1-201ENST00000369592 GGT6Q6P531 493 aa31.99■■■□□ 2.71
SMNDC1-201ENST00000369592 ESF1Q9H501 851 aaKnown RBP31.99■■■□□ 2.71
SMNDC1-201ENST00000369592 DAPK1P53355 1430 aa31.97■■■□□ 2.71
SMNDC1-201ENST00000369592 DISP3Q9P2K9 1392 aa31.96■■■□□ 2.71
SMNDC1-201ENST00000369592 KIF3BO15066 747 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms