RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 AKNAQ7Z591 1439 aa9.37□□□□□ -0.91
SYCP1-201ENST00000369518 BCL11AQ9H165 835 aa9.37□□□□□ -0.91
SYCP1-201ENST00000369518 AGLP35573 1532 aa9.37□□□□□ -0.91
SYCP1-201ENST00000369518 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
SYCP1-201ENST00000369518 FAM135AQ9P2D6 1515 aa9.36□□□□□ -0.91
SYCP1-201ENST00000369518 KIF14Q15058 1648 aa9.35□□□□□ -0.91
SYCP1-201ENST00000369518 ITSN2Q9NZM3 1697 aa9.34□□□□□ -0.91
SYCP1-201ENST00000369518 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
SYCP1-201ENST00000369518 FMN1Q68DA7 1419 aa9.34□□□□□ -0.91
SYCP1-201ENST00000369518 LMTK3Q96Q04 1460 aa9.33□□□□□ -0.92
SYCP1-201ENST00000369518 PLCH2O75038 1416 aa9.33□□□□□ -0.92
SYCP1-201ENST00000369518 CCDC18Q5T9S5 1454 aa9.32□□□□□ -0.92
SYCP1-201ENST00000369518 C9orf84Q5VXU9 1444 aa9.31□□□□□ -0.92
SYCP1-201ENST00000369518 SETD1BQ9UPS6 1966 aaKnown RBP9.31□□□□□ -0.92
SYCP1-201ENST00000369518 CSRNP3Q8WYN3 585 aa9.3□□□□□ -0.92
SYCP1-201ENST00000369518 SIGLEC1Q9BZZ2 1709 aa9.3□□□□□ -0.92
SYCP1-201ENST00000369518 ZNF142P52746 1687 aaPredicted RBP9.3□□□□□ -0.92
SYCP1-201ENST00000369518 LRRIQ1Q96JM4 1722 aa9.3□□□□□ -0.92
SYCP1-201ENST00000369518 ATP10AO60312 1499 aa9.3□□□□□ -0.92
SYCP1-201ENST00000369518 MLH3Q9UHC1 1453 aa9.3□□□□□ -0.92
SYCP1-201ENST00000369518 CDC42BPBQ9Y5S2 1711 aa9.29□□□□□ -0.92
SYCP1-201ENST00000369518 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
SYCP1-201ENST00000369518 ZNF518AQ6AHZ1 1483 aa9.29□□□□□ -0.92
SYCP1-201ENST00000369518 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
SYCP1-201ENST00000369518 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
SYCP1-201ENST00000369518 ABCC1P33527 1531 aa9.27□□□□□ -0.93
SYCP1-201ENST00000369518 TROQ12816 1431 aaPredicted RBP9.26□□□□□ -0.93
SYCP1-201ENST00000369518 CNTLNQ9NXG0 1405 aa9.26□□□□□ -0.93
SYCP1-201ENST00000369518 NCBP3Q53F19 620 aaKnown RBP9.26□□□□□ -0.93
SYCP1-201ENST00000369518 ILDR1Q86SU0 546 aaPredicted RBP9.26□□□□□ -0.93
SYCP1-201ENST00000369518 CDC42BPAQ5VT25 1732 aa9.26□□□□□ -0.93
SYCP1-201ENST00000369518 PTPRTO14522 1441 aa9.26□□□□□ -0.93
SYCP1-201ENST00000369518 CLIP1P30622 1438 aa9.26□□□□□ -0.93
SYCP1-201ENST00000369518 C3P01024 1663 aa9.25□□□□□ -0.93
SYCP1-201ENST00000369518 ADGBQ8N7X0 1667 aa9.25□□□□□ -0.93
SYCP1-201ENST00000369518 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
SYCP1-201ENST00000369518 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
SYCP1-201ENST00000369518 ABCA6Q8N139 1617 aa9.24□□□□□ -0.93
SYCP1-201ENST00000369518 PLEKHH2Q8IVE3 1493 aa9.24□□□□□ -0.93
SYCP1-201ENST00000369518 FYCO1Q9BQS8 1478 aa9.24□□□□□ -0.93
SYCP1-201ENST00000369518 NPATQ14207 1427 aa9.23□□□□□ -0.93
SYCP1-201ENST00000369518 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
SYCP1-201ENST00000369518 INO80Q9ULG1 1556 aaPredicted RBP9.23□□□□□ -0.93
SYCP1-201ENST00000369518 CASKIN1Q8WXD9 1431 aa9.22□□□□□ -0.93
SYCP1-201ENST00000369518 KIDINS220Q9ULH0 1771 aa9.22□□□□□ -0.93
SYCP1-201ENST00000369518 ARHGAP35Q9NRY4 1499 aa9.22□□□□□ -0.93
SYCP1-201ENST00000369518 CDK11AQ9UQ88 783 aaPredicted RBP9.2□□□□□ -0.94
SYCP1-201ENST00000369518 CDK13Q14004 1512 aaKnown RBP9.2□□□□□ -0.94
SYCP1-201ENST00000369518 KIAA1107Q9UPP5 1409 aa9.19□□□□□ -0.94
SYCP1-201ENST00000369518 SCAPERQ9BY12 1400 aa9.19□□□□□ -0.94
SYCP1-201ENST00000369518 PLA2R1Q13018 1463 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 DMRT2Q9Y5R5 561 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 YEATS2Q9ULM3 1422 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 ARHGAP5Q13017 1502 aa9.18□□□□□ -0.94
SYCP1-201ENST00000369518 SAMD9LQ8IVG5 1584 aa9.17□□□□□ -0.94
SYCP1-201ENST00000369518 PPP6R1Q9UPN7 881 aa9.17□□□□□ -0.94
SYCP1-201ENST00000369518 ZC3H13Q5T200 1668 aaKnown RBP9.16□□□□□ -0.94
SYCP1-201ENST00000369518 UHRF1BP1Q6BDS2 1440 aa9.15□□□□□ -0.94
SYCP1-201ENST00000369518 POLR1AO95602 1720 aaPredicted RBP9.15□□□□□ -0.94
SYCP1-201ENST00000369518 MYO3AQ8NEV4 1616 aa9.15□□□□□ -0.94
SYCP1-201ENST00000369518 LTBP4Q8N2S1 1624 aa9.14□□□□□ -0.95
SYCP1-201ENST00000369518 RTEL1-TNFRSF6BF6WH68 1400 aa9.14□□□□□ -0.95
SYCP1-201ENST00000369518 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
SYCP1-201ENST00000369518 EIF2AK4Q9P2K8 1649 aaKnown RBP9.13□□□□□ -0.95
SYCP1-201ENST00000369518 TRAPPC8Q9Y2L5 1435 aa9.13□□□□□ -0.95
SYCP1-201ENST00000369518 EHBP1L1Q8N3D4 1523 aa9.13□□□□□ -0.95
SYCP1-201ENST00000369518 MAST1Q9Y2H9 1570 aa9.13□□□□□ -0.95
SYCP1-201ENST00000369518 ATP7AQ04656 1500 aa9.13□□□□□ -0.95
SYCP1-201ENST00000369518 RAPGEF3O95398 923 aa9.12□□□□□ -0.95
SYCP1-201ENST00000369518 NCOA1Q15788 1441 aa9.12□□□□□ -0.95
SYCP1-201ENST00000369518 ARHGEF5Q12774 1597 aa9.12□□□□□ -0.95
SYCP1-201ENST00000369518 DEPDC5O75140 1603 aa9.12□□□□□ -0.95
SYCP1-201ENST00000369518 PODXL2Q9NZ53 605 aa9.12□□□□□ -0.95
SYCP1-201ENST00000369518 KDM5AP29375 1690 aaKnown RBP9.12□□□□□ -0.95
SYCP1-201ENST00000369518 KCNA4P22459 653 aa9.11□□□□□ -0.95
SYCP1-201ENST00000369518 RNF17Q9BXT8 1623 aaKnown RBP9.11□□□□□ -0.95
SYCP1-201ENST00000369518 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
SYCP1-201ENST00000369518 CLTCQ00610 1675 aaKnown RBP9.09□□□□□ -0.95
SYCP1-201ENST00000369518 TCOF1Q13428 1488 aaKnown RBP9.09□□□□□ -0.95
SYCP1-201ENST00000369518 CEP170BQ9Y4F5 1589 aaPredicted RBP9.09□□□□□ -0.95
SYCP1-201ENST00000369518 SYNMO15061 1565 aa9.08□□□□□ -0.96
SYCP1-201ENST00000369518 CPS1P31327 1500 aa9.08□□□□□ -0.96
SYCP1-201ENST00000369518 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
SYCP1-201ENST00000369518 GPATCH8Q9UKJ3 1502 aaKnown RBP9.08□□□□□ -0.96
SYCP1-201ENST00000369518 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
SYCP1-201ENST00000369518 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
SYCP1-201ENST00000369518 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
SYCP1-201ENST00000369518 CEP162Q5TB80 1403 aa9.07□□□□□ -0.96
SYCP1-201ENST00000369518 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
SYCP1-201ENST00000369518 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
SYCP1-201ENST00000369518 A2ML1A8K2U0 1454 aa9.05□□□□□ -0.96
SYCP1-201ENST00000369518 A2MP01023 1474 aa9.05□□□□□ -0.96
SYCP1-201ENST00000369518 CAMSAP1Q5T5Y3 1602 aa9.05□□□□□ -0.96
SYCP1-201ENST00000369518 PTPRKQ15262 1439 aa9.04□□□□□ -0.96
SYCP1-201ENST00000369518 CAMSAP2Q08AD1 1489 aa9.04□□□□□ -0.96
SYCP1-201ENST00000369518 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
SYCP1-201ENST00000369518 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
SYCP1-201ENST00000369518 MED14O60244 1454 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms