RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 ADGRL1O94910 1474 aa32.61■■■□□ 2.81
CD58-201ENST00000369487 CDC42BPAQ5VT25 1732 aa32.6■■■□□ 2.81
CD58-201ENST00000369487 APLP2Q06481 763 aa32.59■■■□□ 2.81
CD58-201ENST00000369487 LRRC9Q6ZRR7 1453 aa32.59■■■□□ 2.81
CD58-201ENST00000369487 CCNB3Q8WWL7 1395 aa32.58■■■□□ 2.81
CD58-201ENST00000369487 GPATCH8Q9UKJ3 1502 aaKnown RBP32.57■■■□□ 2.8
CD58-201ENST00000369487 SUPT6HQ7KZ85 1726 aaKnown RBP32.57■■■□□ 2.8
CD58-201ENST00000369487 RAPGEF3O95398 923 aa32.55■■■□□ 2.8
CD58-201ENST00000369487 FRMPD1Q5SYB0 1578 aa32.54■■■□□ 2.8
CD58-201ENST00000369487 SCAPERQ9BY12 1400 aa32.54■■■□□ 2.8
CD58-201ENST00000369487 RICTORQ6R327 1708 aa32.52■■■□□ 2.8
CD58-201ENST00000369487 NCOA2Q15596 1464 aa32.51■■■□□ 2.79
CD58-201ENST00000369487 POGZQ7Z3K3 1410 aa32.49■■■□□ 2.79
CD58-201ENST00000369487 ITSN2Q9NZM3 1697 aa32.49■■■□□ 2.79
CD58-201ENST00000369487 KANK4Q5T7N3 995 aaPredicted RBP32.47■■■□□ 2.79
CD58-201ENST00000369487 CFDP1Q9UEE9 299 aaPredicted RBP32.47■■■□□ 2.79
CD58-201ENST00000369487 ABCC1P33527 1531 aa32.46■■■□□ 2.79
CD58-201ENST00000369487 ZMYM4Q5VZL5 1548 aa32.45■■■□□ 2.78
CD58-201ENST00000369487 ZNF518AQ6AHZ1 1483 aa32.42■■■□□ 2.78
CD58-201ENST00000369487 SAMD9LQ8IVG5 1584 aa32.41■■■□□ 2.78
CD58-201ENST00000369487 ZNF777Q9ULD5 760 aaPredicted RBP32.41■■■□□ 2.78
CD58-201ENST00000369487 PLEKHH2Q8IVE3 1493 aa32.4■■■□□ 2.78
CD58-201ENST00000369487 MAGI2Q86UL8 1455 aa32.39■■■□□ 2.78
CD58-201ENST00000369487 ARHGEF12Q9NZN5 1544 aa32.36■■■□□ 2.77
CD58-201ENST00000369487 KIAA1107Q9UPP5 1409 aa32.35■■■□□ 2.77
CD58-201ENST00000369487 KDM5CP41229 1560 aa32.35■■■□□ 2.77
CD58-201ENST00000369487 ARHGEF40Q8TER5 1519 aa32.35■■■□□ 2.77
CD58-201ENST00000369487 SYCP2Q9BX26 1530 aa32.33■■■□□ 2.77
CD58-201ENST00000369487 ZFYVE16Q7Z3T8 1539 aa32.32■■■□□ 2.76
CD58-201ENST00000369487 AFAP1Q8N556 730 aa32.31■■■□□ 2.76
CD58-201ENST00000369487 TRAPPC8Q9Y2L5 1435 aa32.31■■■□□ 2.76
CD58-201ENST00000369487 MYOM3Q5VTT5 1437 aa32.27■■■□□ 2.76
CD58-201ENST00000369487 HECW2Q9P2P5 1572 aa32.27■■■□□ 2.76
CD58-201ENST00000369487 YEATS2Q9ULM3 1422 aa32.26■■■□□ 2.75
CD58-201ENST00000369487 MLH3Q9UHC1 1453 aa32.25■■■□□ 2.75
CD58-201ENST00000369487 HNRNPMP52272 730 aaKnown RBP eCLIP32.25■■■□□ 2.75
CD58-201ENST00000369487 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
CD58-201ENST00000369487 MIA2Q96PC5 1412 aa32.24■■■□□ 2.75
CD58-201ENST00000369487 ZNF644Q9H582 1327 aaPredicted RBP32.24■■■□□ 2.75
CD58-201ENST00000369487 MYT1LQ9UL68 1186 aa32.21■■■□□ 2.75
CD58-201ENST00000369487 MBD5Q9P267 1494 aa32.19■■■□□ 2.74
CD58-201ENST00000369487 ATP10AO60312 1499 aa32.17■■■□□ 2.74
CD58-201ENST00000369487 KDM4FA0A1W2PPD8 638 aa32.15■■■□□ 2.74
CD58-201ENST00000369487 SPAG9O60271 1321 aaKnown RBP32.15■■■□□ 2.74
CD58-201ENST00000369487 C9orf84Q5VXU9 1444 aa32.15■■■□□ 2.74
CD58-201ENST00000369487 RSPH4AQ5TD94 716 aa32.14■■■□□ 2.74
CD58-201ENST00000369487 KIDINS220Q9ULH0 1771 aa32.13■■■□□ 2.73
CD58-201ENST00000369487 DIP2CQ9Y2E4 1556 aa32.13■■■□□ 2.73
CD58-201ENST00000369487 CCDC141Q6ZP82 1450 aa32.12■■■□□ 2.73
CD58-201ENST00000369487 ARID4BQ4LE39 1312 aaPredicted RBP32.12■■■□□ 2.73
CD58-201ENST00000369487 ABCA6Q8N139 1617 aa32.11■■■□□ 2.73
CD58-201ENST00000369487 ARHGEF5Q12774 1597 aa32.11■■■□□ 2.73
CD58-201ENST00000369487 ATP7AQ04656 1500 aa32.1■■■□□ 2.73
CD58-201ENST00000369487 INO80Q9ULG1 1556 aaPredicted RBP32.1■■■□□ 2.73
CD58-201ENST00000369487 FGD6Q6ZV73 1430 aa32.09■■■□□ 2.73
CD58-201ENST00000369487 REREQ9P2R6 1566 aa32.08■■■□□ 2.73
CD58-201ENST00000369487 AEBP2Q6ZN18 517 aaPredicted RBP32.06■■■□□ 2.72
CD58-201ENST00000369487 PTPN23Q9H3S7 1636 aa32.06■■■□□ 2.72
CD58-201ENST00000369487 RTEL1-TNFRSF6BF6WH68 1400 aa32.05■■■□□ 2.72
CD58-201ENST00000369487 BCORL1Q5H9F3 1711 aa32.04■■■□□ 2.72
CD58-201ENST00000369487 SIGLEC1Q9BZZ2 1709 aa32.03■■■□□ 2.72
CD58-201ENST00000369487 TCOF1Q13428 1488 aaKnown RBP32.02■■■□□ 2.72
CD58-201ENST00000369487 TSPY4P0CV99 314 aa31.99■■■□□ 2.71
CD58-201ENST00000369487 TSPY10P0CW01 314 aa31.99■■■□□ 2.71
CD58-201ENST00000369487 ADAMTSL3P82987 1691 aa31.99■■■□□ 2.71
CD58-201ENST00000369487 AGLP35573 1532 aa31.97■■■□□ 2.71
CD58-201ENST00000369487 ADGBQ8N7X0 1667 aa31.94■■■□□ 2.7
CD58-201ENST00000369487 MAST1Q9Y2H9 1570 aa31.94■■■□□ 2.7
CD58-201ENST00000369487 A2MP01023 1474 aa31.92■■■□□ 2.7
CD58-201ENST00000369487 PPARGC1BQ86YN6 1023 aaKnown RBP31.92■■■□□ 2.7
CD58-201ENST00000369487 PLXNC1O60486 1568 aa31.9■■■□□ 2.7
CD58-201ENST00000369487 MADDQ8WXG6 1647 aa31.9■■■□□ 2.7
CD58-201ENST00000369487 MLECQ14165 292 aa31.89■■■□□ 2.7
CD58-201ENST00000369487 SHANK2Q9UPX8 1470 aa31.89■■■□□ 2.7
CD58-201ENST00000369487 DNMT1P26358 1616 aaKnown RBP31.89■■■□□ 2.7
CD58-201ENST00000369487 CROCC2H7BZ55 1655 aa31.87■■■□□ 2.69
CD58-201ENST00000369487 ABCC5O15440 1437 aa31.87■■■□□ 2.69
CD58-201ENST00000369487 DAPK1P53355 1430 aa31.86■■■□□ 2.69
CD58-201ENST00000369487 FAM50AQ14320 339 aaKnown RBP31.84■■■□□ 2.69
CD58-201ENST00000369487 DHX29Q7Z478 1369 aaKnown RBP31.83■■■□□ 2.69
CD58-201ENST00000369487 FER1L4A9Z1Z3 1794 aa31.81■■■□□ 2.68
CD58-201ENST00000369487 PTPRMP28827 1452 aa31.81■■■□□ 2.68
CD58-201ENST00000369487 RIMS1Q86UR5 1692 aaKnown RBP31.8■■■□□ 2.68
CD58-201ENST00000369487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.74■■■□□ 2.67
CD58-201ENST00000369487 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
CD58-201ENST00000369487 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.67
CD58-201ENST00000369487 ANKRD30AQ9BXX3 1397 aa31.7■■■□□ 2.67
CD58-201ENST00000369487 KIF15Q9NS87 1388 aa31.69■■■□□ 2.66
CD58-201ENST00000369487 CNTLNQ9NXG0 1405 aa31.69■■■□□ 2.66
CD58-201ENST00000369487 RRBP1Q9P2E9 1410 aaKnown RBP31.69■■■□□ 2.66
CD58-201ENST00000369487 ADGRL2O95490 1459 aa31.67■■■□□ 2.66
CD58-201ENST00000369487 KIF3BO15066 747 aa31.67■■■□□ 2.66
CD58-201ENST00000369487 GGT6Q6P531 493 aa31.66■■■□□ 2.66
CD58-201ENST00000369487 CHIC2Q9UKJ5 165 aa31.66■■■□□ 2.66
CD58-201ENST00000369487 PPP6R1Q9UPN7 881 aa31.66■■■□□ 2.66
CD58-201ENST00000369487 EIF2AK4Q9P2K8 1649 aaKnown RBP31.66■■■□□ 2.66
CD58-201ENST00000369487 RRP7BPQ9NSQ0 103 aa31.64■■■□□ 2.66
CD58-201ENST00000369487 NCOA1Q15788 1441 aa31.64■■■□□ 2.66
CD58-201ENST00000369487 ERBINQ96RT1 1412 aa31.63■■■□□ 2.65
CD58-201ENST00000369487 FAM135AQ9P2D6 1515 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms