RNA–Protein interactions for RNA: ENST00000369484.7

CMC4-202, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC4, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-202ENST00000369484 POGZQ7Z3K3 1410 aa43.99■■■■■ 4.63
CMC4-202ENST00000369484 PCF11O94913 1555 aaKnown RBP43.98■■■■■ 4.63
CMC4-202ENST00000369484 KIF14Q15058 1648 aa43.98■■■■■ 4.63
CMC4-202ENST00000369484 SCAPERQ9BY12 1400 aa43.97■■■■■ 4.63
CMC4-202ENST00000369484 ATP1B4Q9UN42 357 aaPredicted RBP43.96■■■■■ 4.63
CMC4-202ENST00000369484 LMTK3Q96Q04 1460 aa43.92■■■■■ 4.62
CMC4-202ENST00000369484 CDK11AQ9UQ88 783 aaPredicted RBP43.91■■■■■ 4.62
CMC4-202ENST00000369484 TROQ12816 1431 aaPredicted RBP43.89■■■■■ 4.62
CMC4-202ENST00000369484 FER1L4A9Z1Z3 1794 aa43.85■■■■■ 4.61
CMC4-202ENST00000369484 EFCAB2Q5VUJ9 269 aa43.85■■■■■ 4.61
CMC4-202ENST00000369484 CLIP1P30622 1438 aa43.79■■■■■ 4.6
CMC4-202ENST00000369484 ARHGAP5Q13017 1502 aa43.77■■■■■ 4.6
CMC4-202ENST00000369484 ATP10AO60312 1499 aa43.76■■■■■ 4.6
CMC4-202ENST00000369484 CDC42BPBQ9Y5S2 1711 aa43.75■■■■■ 4.59
CMC4-202ENST00000369484 C9orf84Q5VXU9 1444 aa43.73■■■■■ 4.59
CMC4-202ENST00000369484 KDM5CP41229 1560 aa43.73■■■■■ 4.59
CMC4-202ENST00000369484 ZNF518AQ6AHZ1 1483 aa43.73■■■■■ 4.59
CMC4-202ENST00000369484 ARHGEF12Q9NZN5 1544 aa43.7■■■■■ 4.59
CMC4-202ENST00000369484 CASKIN1Q8WXD9 1431 aa43.68■■■■■ 4.58
CMC4-202ENST00000369484 MLECQ14165 292 aa43.68■■■■■ 4.58
CMC4-202ENST00000369484 CCDC18Q5T9S5 1454 aa43.67■■■■■ 4.58
CMC4-202ENST00000369484 PREX2Q70Z35 1606 aa43.66■■■■■ 4.58
CMC4-202ENST00000369484 PLPPR3Q6T4P5 718 aa43.61■■■■■ 4.57
CMC4-202ENST00000369484 FBXO41Q8TF61 875 aa43.6■■■■■ 4.57
CMC4-202ENST00000369484 DIP2CQ9Y2E4 1556 aa43.58■■■■■ 4.57
CMC4-202ENST00000369484 AFAP1Q8N556 730 aa43.57■■■■■ 4.57
CMC4-202ENST00000369484 HSPA2P54652 639 aa43.56■■■■■ 4.56
CMC4-202ENST00000369484 REREQ9P2R6 1566 aa43.55■■■■■ 4.56
CMC4-202ENST00000369484 CDC42BPAQ5VT25 1732 aa43.55■■■■■ 4.56
CMC4-202ENST00000369484 ABCC1P33527 1531 aa43.54■■■■■ 4.56
CMC4-202ENST00000369484 ITSN2Q9NZM3 1697 aa43.54■■■■■ 4.56
CMC4-202ENST00000369484 FYCO1Q9BQS8 1478 aa43.52■■■■■ 4.56
CMC4-202ENST00000369484 ABCA6Q8N139 1617 aa43.52■■■■■ 4.56
CMC4-202ENST00000369484 PREX1Q8TCU6 1659 aa43.52■■■■■ 4.56
CMC4-202ENST00000369484 MLH3Q9UHC1 1453 aa43.51■■■■■ 4.56
CMC4-202ENST00000369484 TRAPPC8Q9Y2L5 1435 aa43.44■■■■■ 4.54
CMC4-202ENST00000369484 SETD1BQ9UPS6 1966 aaKnown RBP43.43■■■■■ 4.54
CMC4-202ENST00000369484 KIDINS220Q9ULH0 1771 aa43.39■■■■■ 4.54
CMC4-202ENST00000369484 MYT1LQ9UL68 1186 aa43.39■■■■■ 4.54
CMC4-202ENST00000369484 AGLP35573 1532 aa43.37■■■■■ 4.53
CMC4-202ENST00000369484 CEBPAP49715 358 aaPredicted RBP43.35■■■■■ 4.53
CMC4-202ENST00000369484 C3P01024 1663 aa43.31■■■■■ 4.52
CMC4-202ENST00000369484 SAMD9LQ8IVG5 1584 aa43.3■■■■■ 4.52
CMC4-202ENST00000369484 GPATCH8Q9UKJ3 1502 aaKnown RBP43.25■■■■■ 4.51
CMC4-202ENST00000369484 STRCQ7RTU9 1775 aa43.24■■■■■ 4.51
CMC4-202ENST00000369484 SYCP2Q9BX26 1530 aa43.22■■■■■ 4.51
CMC4-202ENST00000369484 UHRF1BP1Q6BDS2 1440 aa43.22■■■■■ 4.51
CMC4-202ENST00000369484 ZNF777Q9ULD5 760 aaPredicted RBP43.15■■■■■ 4.5
CMC4-202ENST00000369484 CERKQ8TCT0 537 aa43.1■■■■■ 4.49
CMC4-202ENST00000369484 CNTLNQ9NXG0 1405 aa43.09■■■■■ 4.49
CMC4-202ENST00000369484 KIAA1107Q9UPP5 1409 aa43.09■■■■■ 4.49
CMC4-202ENST00000369484 MROH2AA6NES4 1674 aa43.08■■■■■ 4.49
CMC4-202ENST00000369484 INO80Q9ULG1 1556 aaPredicted RBP43.08■■■■■ 4.49
CMC4-202ENST00000369484 PLEKHH2Q8IVE3 1493 aa43.08■■■■■ 4.49
CMC4-202ENST00000369484 ESF1Q9H501 851 aaKnown RBP43.08■■■■■ 4.49
CMC4-202ENST00000369484 SUPT6HQ7KZ85 1726 aaKnown RBP43.08■■■■■ 4.49
CMC4-202ENST00000369484 ATP7AQ04656 1500 aa43.07■■■■■ 4.48
CMC4-202ENST00000369484 SPAG9O60271 1321 aaKnown RBP43.05■■■■■ 4.48
CMC4-202ENST00000369484 HNRNPMP52272 730 aaKnown RBP eCLIP43.04■■■■■ 4.48
CMC4-202ENST00000369484 CCNB3Q8WWL7 1395 aa43.03■■■■■ 4.48
CMC4-202ENST00000369484 MTUS2Q5JR59 1369 aa43.03■■■■■ 4.48
CMC4-202ENST00000369484 CFDP1Q9UEE9 299 aaPredicted RBP43.02■■■■■ 4.48
CMC4-202ENST00000369484 PLXNC1O60486 1568 aa43.02■■■■■ 4.48
CMC4-202ENST00000369484 DMRT2Q9Y5R5 561 aa43.01■■■■■ 4.48
CMC4-202ENST00000369484 TIAM1Q13009 1591 aa42.98■■■■■ 4.47
CMC4-202ENST00000369484 EHBP1L1Q8N3D4 1523 aa42.97■■■■■ 4.47
CMC4-202ENST00000369484 A2MP01023 1474 aa42.92■■■■■ 4.46
CMC4-202ENST00000369484 NPATQ14207 1427 aa42.91■■■■■ 4.46
CMC4-202ENST00000369484 CLTCQ00610 1675 aaKnown RBP42.91■■■■■ 4.46
CMC4-202ENST00000369484 ADGBQ8N7X0 1667 aa42.91■■■■■ 4.46
CMC4-202ENST00000369484 PTPRTO14522 1441 aa42.9■■■■■ 4.46
CMC4-202ENST00000369484 ZMYM3Q14202 1370 aa42.86■■■■■ 4.45
CMC4-202ENST00000369484 CEP162Q5TB80 1403 aa42.85■■■■■ 4.45
CMC4-202ENST00000369484 NCOA1Q15788 1441 aa42.83■■■■■ 4.45
CMC4-202ENST00000369484 MBD5Q9P267 1494 aa42.81■■■■■ 4.44
CMC4-202ENST00000369484 ZNF644Q9H582 1327 aaPredicted RBP42.8■■■■■ 4.44
CMC4-202ENST00000369484 ZNF142P52746 1687 aaPredicted RBP42.77■■■■■ 4.44
CMC4-202ENST00000369484 CAMSAP1Q5T5Y3 1602 aa42.76■■■■■ 4.44
CMC4-202ENST00000369484 MYO3AQ8NEV4 1616 aa42.75■■■■■ 4.43
CMC4-202ENST00000369484 RTEL1-TNFRSF6BF6WH68 1400 aa42.71■■■■■ 4.43
CMC4-202ENST00000369484 LTBP4Q8N2S1 1624 aa42.71■■■■■ 4.43
CMC4-202ENST00000369484 PTPRKQ15262 1439 aa42.69■■■■■ 4.42
CMC4-202ENST00000369484 GGT6Q6P531 493 aa42.68■■■■■ 4.42
CMC4-202ENST00000369484 PPP6R1Q9UPN7 881 aa42.66■■■■■ 4.42
CMC4-202ENST00000369484 NCOA2Q15596 1464 aa42.66■■■■■ 4.42
CMC4-202ENST00000369484 CEP170BQ9Y4F5 1589 aaPredicted RBP42.65■■■■■ 4.42
CMC4-202ENST00000369484 CCDC141Q6ZP82 1450 aa42.62■■■■■ 4.41
CMC4-202ENST00000369484 CAMSAP2Q08AD1 1489 aa42.61■■■■■ 4.41
CMC4-202ENST00000369484 DHX29Q7Z478 1369 aaKnown RBP42.59■■■■■ 4.41
CMC4-202ENST00000369484 PLA2R1Q13018 1463 aa42.59■■■■■ 4.41
CMC4-202ENST00000369484 IQSEC2Q5JU85 1478 aa42.56■■■■■ 4.4
CMC4-202ENST00000369484 TCOF1Q13428 1488 aaKnown RBP42.51■■■■■ 4.4
CMC4-202ENST00000369484 ARHGEF5Q12774 1597 aa42.51■■■■■ 4.4
CMC4-202ENST00000369484 NCKAP5LQ9HCH0 1330 aa42.5■■■■■ 4.39
CMC4-202ENST00000369484 FAM135AQ9P2D6 1515 aa42.5■■■■■ 4.39
CMC4-202ENST00000369484 RSPH4AQ5TD94 716 aa42.48■■■■■ 4.39
CMC4-202ENST00000369484 PKD2Q13563 968 aa42.45■■■■■ 4.39
CMC4-202ENST00000369484 KDM5DQ9BY66 1539 aa42.45■■■■■ 4.39
CMC4-202ENST00000369484 A2ML1A8K2U0 1454 aa42.44■■■■■ 4.38
CMC4-202ENST00000369484 DNMT1P26358 1616 aaKnown RBP42.44■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms