RNA–Protein interactions for RNA: ENST00000369144.7

EIF3A-201, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3A, Length 6,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-201ENST00000369144 CHMP4BQ9H444 224 aaKnown RBP16.04■□□□□ 0.16
EIF3A-201ENST00000369144 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
EIF3A-201ENST00000369144 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
EIF3A-201ENST00000369144 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
EIF3A-201ENST00000369144 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
EIF3A-201ENST00000369144 SRPK2P78362 688 aaKnown RBP16.02■□□□□ 0.15
EIF3A-201ENST00000369144 MS4A1P11836 297 aa16.01■□□□□ 0.15
EIF3A-201ENST00000369144 PES1O00541 588 aaKnown RBP16■□□□□ 0.15
EIF3A-201ENST00000369144 TPM4P67936 248 aa16■□□□□ 0.15
EIF3A-201ENST00000369144 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
EIF3A-201ENST00000369144 G3V3G9 751 aa15.99■□□□□ 0.15
EIF3A-201ENST00000369144 GORABQ5T7V8 394 aa15.99■□□□□ 0.15
EIF3A-201ENST00000369144 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
EIF3A-201ENST00000369144 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
EIF3A-201ENST00000369144 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
EIF3A-201ENST00000369144 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
EIF3A-201ENST00000369144 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
EIF3A-201ENST00000369144 STK26Q9P289 416 aa15.97■□□□□ 0.15
EIF3A-201ENST00000369144 ITPRIPQ8IWB1 547 aa15.97■□□□□ 0.15
EIF3A-201ENST00000369144 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
EIF3A-201ENST00000369144 TRIM6-TRIM34B2RNG4 842 aa15.96■□□□□ 0.15
EIF3A-201ENST00000369144 MFAP1P55081 439 aaKnown RBP15.96■□□□□ 0.15
EIF3A-201ENST00000369144 GBP4Q96PP9 640 aa15.96■□□□□ 0.15
EIF3A-201ENST00000369144 SIN3AQ96ST3 1273 aa15.96■□□□□ 0.15
EIF3A-201ENST00000369144 TOMM22Q9NS69 142 aa15.95■□□□□ 0.14
EIF3A-201ENST00000369144 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
EIF3A-201ENST00000369144 CCAR2Q8N163 923 aaKnown RBP15.95■□□□□ 0.14
EIF3A-201ENST00000369144 MARCH6O60337 910 aa15.94■□□□□ 0.14
EIF3A-201ENST00000369144 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
EIF3A-201ENST00000369144 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
EIF3A-201ENST00000369144 FOXD4L6Q3SYB3 417 aaPredicted RBP15.91■□□□□ 0.14
EIF3A-201ENST00000369144 FOXD4L3Q6VB84 417 aaPredicted RBP15.91■□□□□ 0.14
EIF3A-201ENST00000369144 CFDP1Q9UEE9 299 aaPredicted RBP15.91■□□□□ 0.14
EIF3A-201ENST00000369144 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
EIF3A-201ENST00000369144 TPM3P06753 285 aa15.9■□□□□ 0.14
EIF3A-201ENST00000369144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.14
EIF3A-201ENST00000369144 SETQ01105 290 aaPredicted RBP15.89■□□□□ 0.13
EIF3A-201ENST00000369144 PTMSP20962 102 aa15.89■□□□□ 0.13
EIF3A-201ENST00000369144 SYAP1Q96A49 352 aaPredicted RBP15.89■□□□□ 0.13
EIF3A-201ENST00000369144 DCAF11Q8TEB1 546 aa15.88■□□□□ 0.13
EIF3A-201ENST00000369144 RAD21O60216 631 aa15.88■□□□□ 0.13
EIF3A-201ENST00000369144 GOLGA6L3A6NEY3 463 aa15.88■□□□□ 0.13
EIF3A-201ENST00000369144 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
EIF3A-201ENST00000369144 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
EIF3A-201ENST00000369144 SLC4A10Q6U841 1118 aa15.87■□□□□ 0.13
EIF3A-201ENST00000369144 TMF1P82094 1093 aa15.86■□□□□ 0.13
EIF3A-201ENST00000369144 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
EIF3A-201ENST00000369144 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
EIF3A-201ENST00000369144 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
EIF3A-201ENST00000369144 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
EIF3A-201ENST00000369144 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
EIF3A-201ENST00000369144 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
EIF3A-201ENST00000369144 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.12
EIF3A-201ENST00000369144 ZNF592Q92610 1267 aa15.81■□□□□ 0.12
EIF3A-201ENST00000369144 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
EIF3A-201ENST00000369144 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
EIF3A-201ENST00000369144 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
EIF3A-201ENST00000369144 IPO8O15397 1037 aaKnown RBP15.8■□□□□ 0.12
EIF3A-201ENST00000369144 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
EIF3A-201ENST00000369144 CLIP1P30622 1438 aa15.79■□□□□ 0.12
EIF3A-201ENST00000369144 CFAP44Q96MT7 982 aa15.79■□□□□ 0.12
EIF3A-201ENST00000369144 CLUAP1Q96AJ1 413 aa15.78■□□□□ 0.12
EIF3A-201ENST00000369144 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
EIF3A-201ENST00000369144 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
EIF3A-201ENST00000369144 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
EIF3A-201ENST00000369144 RWDD1Q9H446 243 aaPredicted RBP15.77■□□□□ 0.12
EIF3A-201ENST00000369144 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.12
EIF3A-201ENST00000369144 H3BQV1 296 aa15.77■□□□□ 0.11
EIF3A-201ENST00000369144 IFFO2Q5TF58 517 aa15.77■□□□□ 0.11
EIF3A-201ENST00000369144 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
EIF3A-201ENST00000369144 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
EIF3A-201ENST00000369144 TSR1Q2NL82 804 aaKnown RBP15.76■□□□□ 0.11
EIF3A-201ENST00000369144 CCDC146Q8IYE0 955 aa15.76■□□□□ 0.11
EIF3A-201ENST00000369144 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
EIF3A-201ENST00000369144 HDGFL2Q7Z4V5 671 aaPredicted RBP15.75■□□□□ 0.11
EIF3A-201ENST00000369144 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 TCEAL9Q9UHQ7 104 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 MSH5O43196 834 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 KIF16BQ96L93 1317 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 STK31Q9BXU1 1019 aa15.75■□□□□ 0.11
EIF3A-201ENST00000369144 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
EIF3A-201ENST00000369144 HSP90AA2PQ14568 343 aaPredicted RBP15.74■□□□□ 0.11
EIF3A-201ENST00000369144 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
EIF3A-201ENST00000369144 RILPL2Q969X0 211 aa15.73■□□□□ 0.11
EIF3A-201ENST00000369144 MCTP1Q6DN14 999 aa15.73■□□□□ 0.11
EIF3A-201ENST00000369144 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
EIF3A-201ENST00000369144 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
EIF3A-201ENST00000369144 RCAN3Q9UKA8 241 aa15.72■□□□□ 0.11
EIF3A-201ENST00000369144 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
EIF3A-201ENST00000369144 GGT6Q6P531 493 aa15.72■□□□□ 0.11
EIF3A-201ENST00000369144 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
EIF3A-201ENST00000369144 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
EIF3A-201ENST00000369144 FOXD1Q16676 465 aa15.7■□□□□ 0.1
EIF3A-201ENST00000369144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.7■□□□□ 0.13e-6■■■■□ 25.2
EIF3A-201ENST00000369144 TPM2P07951 284 aa15.7■□□□□ 0.1
EIF3A-201ENST00000369144 SLC4A3P48751 1232 aa15.7■□□□□ 0.1
EIF3A-201ENST00000369144 GOLGA6L19H0YKK7 550 aa15.7■□□□□ 0.1
EIF3A-201ENST00000369144 FAM184AQ8NB25 1140 aa15.7■□□□□ 0.1
EIF3A-201ENST00000369144 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms