RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
LINC01561-201ENST00000369071 WDR62O43379 1518 aa17.35■□□□□ 0.37
LINC01561-201ENST00000369071 IQGAP2Q13576 1575 aa17.35■□□□□ 0.37
LINC01561-201ENST00000369071 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
LINC01561-201ENST00000369071 RPRD2Q5VT52 1461 aaKnown RBP17.35■□□□□ 0.37
LINC01561-201ENST00000369071 FOXD1Q16676 465 aa17.33■□□□□ 0.37
LINC01561-201ENST00000369071 ROCK1Q13464 1354 aa17.33■□□□□ 0.36
LINC01561-201ENST00000369071 PBRM1Q86U86 1689 aa17.33■□□□□ 0.36
LINC01561-201ENST00000369071 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
LINC01561-201ENST00000369071 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
LINC01561-201ENST00000369071 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
LINC01561-201ENST00000369071 DAPK1P53355 1430 aa17.31■□□□□ 0.36
LINC01561-201ENST00000369071 SPATA31E1Q6ZUB1 1445 aa17.31■□□□□ 0.36
LINC01561-201ENST00000369071 ZBED9Q6R2W3 1325 aa17.3■□□□□ 0.36
LINC01561-201ENST00000369071 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
LINC01561-201ENST00000369071 POLR1AO95602 1720 aaPredicted RBP17.29■□□□□ 0.36
LINC01561-201ENST00000369071 DNMT1P26358 1616 aaKnown RBP17.28■□□□□ 0.36
LINC01561-201ENST00000369071 ABCC5O15440 1437 aa17.28■□□□□ 0.36
LINC01561-201ENST00000369071 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
LINC01561-201ENST00000369071 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
LINC01561-201ENST00000369071 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
LINC01561-201ENST00000369071 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.35
LINC01561-201ENST00000369071 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
LINC01561-201ENST00000369071 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.34
LINC01561-201ENST00000369071 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
LINC01561-201ENST00000369071 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
LINC01561-201ENST00000369071 PZPP20742 1482 aa17.19■□□□□ 0.34
LINC01561-201ENST00000369071 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
LINC01561-201ENST00000369071 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
LINC01561-201ENST00000369071 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
LINC01561-201ENST00000369071 KIAA0556O60303 1618 aa17.18■□□□□ 0.34
LINC01561-201ENST00000369071 DISP1Q96F81 1524 aa17.18■□□□□ 0.34
LINC01561-201ENST00000369071 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
LINC01561-201ENST00000369071 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
LINC01561-201ENST00000369071 RAPGEF6Q8TEU7 1601 aa17.15■□□□□ 0.34
LINC01561-201ENST00000369071 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
LINC01561-201ENST00000369071 KIAA0586Q9BVV6 1533 aa17.14■□□□□ 0.33
LINC01561-201ENST00000369071 BCORL1Q5H9F3 1711 aa17.14■□□□□ 0.33
LINC01561-201ENST00000369071 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
LINC01561-201ENST00000369071 ADGBQ8N7X0 1667 aa17.12■□□□□ 0.33
LINC01561-201ENST00000369071 KIAA1107Q9UPP5 1409 aa17.11■□□□□ 0.33
LINC01561-201ENST00000369071 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
LINC01561-201ENST00000369071 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
LINC01561-201ENST00000369071 KIF14Q15058 1648 aa17.1■□□□□ 0.33
LINC01561-201ENST00000369071 USP47Q96K76 1375 aa17.1■□□□□ 0.33
LINC01561-201ENST00000369071 ADGRL2O95490 1459 aa17.1■□□□□ 0.33
LINC01561-201ENST00000369071 KDM5CP41229 1560 aa17.09■□□□□ 0.33
LINC01561-201ENST00000369071 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
LINC01561-201ENST00000369071 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
LINC01561-201ENST00000369071 NUDCQ9Y266 331 aa17.08■□□□□ 0.33
LINC01561-201ENST00000369071 PRG4Q92954 1404 aaPredicted RBP17.08■□□□□ 0.32
LINC01561-201ENST00000369071 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
LINC01561-201ENST00000369071 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
LINC01561-201ENST00000369071 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
LINC01561-201ENST00000369071 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
LINC01561-201ENST00000369071 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
LINC01561-201ENST00000369071 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
LINC01561-201ENST00000369071 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
LINC01561-201ENST00000369071 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
LINC01561-201ENST00000369071 PKD2Q13563 968 aa17.04■□□□□ 0.32
LINC01561-201ENST00000369071 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
LINC01561-201ENST00000369071 RALGAPBQ86X10 1494 aa17.03■□□□□ 0.32
LINC01561-201ENST00000369071 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
LINC01561-201ENST00000369071 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
LINC01561-201ENST00000369071 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
LINC01561-201ENST00000369071 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
LINC01561-201ENST00000369071 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
LINC01561-201ENST00000369071 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
LINC01561-201ENST00000369071 ANKRD50Q9ULJ7 1429 aa16.99■□□□□ 0.31
LINC01561-201ENST00000369071 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
LINC01561-201ENST00000369071 ARHGEF12Q9NZN5 1544 aa16.98■□□□□ 0.31
LINC01561-201ENST00000369071 PLB1Q6P1J6 1458 aa16.98■□□□□ 0.31
LINC01561-201ENST00000369071 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
LINC01561-201ENST00000369071 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
LINC01561-201ENST00000369071 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
LINC01561-201ENST00000369071 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
LINC01561-201ENST00000369071 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
LINC01561-201ENST00000369071 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
LINC01561-201ENST00000369071 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
LINC01561-201ENST00000369071 SHANK2Q9UPX8 1470 aa16.94■□□□□ 0.3
LINC01561-201ENST00000369071 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
LINC01561-201ENST00000369071 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
LINC01561-201ENST00000369071 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
LINC01561-201ENST00000369071 BRD4O60885 1362 aaPredicted RBP16.93■□□□□ 0.3
LINC01561-201ENST00000369071 PAK3O75914 559 aaPredicted RBP16.93■□□□□ 0.3
LINC01561-201ENST00000369071 NUP155O75694 1391 aa16.93■□□□□ 0.3
LINC01561-201ENST00000369071 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
LINC01561-201ENST00000369071 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
LINC01561-201ENST00000369071 E9PCH4 1651 aa16.92■□□□□ 0.3
LINC01561-201ENST00000369071 MYBBP1AQ9BQG0 1328 aaKnown RBP16.91■□□□□ 0.3
LINC01561-201ENST00000369071 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
LINC01561-201ENST00000369071 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
LINC01561-201ENST00000369071 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
LINC01561-201ENST00000369071 ST20-MTHFSA0A0A6YYL1 179 aa16.9■□□□□ 0.3
LINC01561-201ENST00000369071 RALBP1Q15311 655 aa16.9■□□□□ 0.3
LINC01561-201ENST00000369071 PTPRGP23470 1445 aa16.89■□□□□ 0.3
LINC01561-201ENST00000369071 DEKP35659 375 aaKnown RBP16.89■□□□□ 0.29
LINC01561-201ENST00000369071 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
LINC01561-201ENST00000369071 IPO9Q96P70 1041 aaKnown RBP16.88■□□□□ 0.29
LINC01561-201ENST00000369071 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms