RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 PTPRMP28827 1452 aa28.7■■■□□ 2.18
C1orf43-204ENST00000368518 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
C1orf43-204ENST00000368518 ZFYVE16Q7Z3T8 1539 aa28.69■■■□□ 2.18
C1orf43-204ENST00000368518 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
C1orf43-204ENST00000368518 POGZQ7Z3K3 1410 aa28.68■■■□□ 2.18
C1orf43-204ENST00000368518 MADDQ8WXG6 1647 aa28.67■■■□□ 2.18
C1orf43-204ENST00000368518 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
C1orf43-204ENST00000368518 CCDC18Q5T9S5 1454 aa28.65■■■□□ 2.18
C1orf43-204ENST00000368518 MAGI2Q86UL8 1455 aa28.63■■■□□ 2.17
C1orf43-204ENST00000368518 SIGLEC1Q9BZZ2 1709 aa28.61■■■□□ 2.17
C1orf43-204ENST00000368518 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
C1orf43-204ENST00000368518 RIMS1Q86UR5 1692 aaKnown RBP28.58■■■□□ 2.17
C1orf43-204ENST00000368518 MLECQ14165 292 aa28.58■■■□□ 2.17
C1orf43-204ENST00000368518 PLPPR3Q6T4P5 718 aa28.57■■■□□ 2.16
C1orf43-204ENST00000368518 CDC42BPBQ9Y5S2 1711 aa28.56■■■□□ 2.16
C1orf43-204ENST00000368518 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
C1orf43-204ENST00000368518 MYT1LQ9UL68 1186 aa28.54■■■□□ 2.16
C1orf43-204ENST00000368518 ZNF518AQ6AHZ1 1483 aa28.53■■■□□ 2.16
C1orf43-204ENST00000368518 ATP10AO60312 1499 aa28.52■■■□□ 2.16
C1orf43-204ENST00000368518 PREX2Q70Z35 1606 aa28.51■■■□□ 2.15
C1orf43-204ENST00000368518 C9orf84Q5VXU9 1444 aa28.48■■■□□ 2.15
C1orf43-204ENST00000368518 CDC42BPAQ5VT25 1732 aa28.46■■■□□ 2.15
C1orf43-204ENST00000368518 KDM5CP41229 1560 aa28.45■■■□□ 2.15
C1orf43-204ENST00000368518 ILDR1Q86SU0 546 aaPredicted RBP28.44■■■□□ 2.14
C1orf43-204ENST00000368518 FER1L4A9Z1Z3 1794 aa28.44■■■□□ 2.14
C1orf43-204ENST00000368518 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
C1orf43-204ENST00000368518 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
C1orf43-204ENST00000368518 ABCC1P33527 1531 aa28.43■■■□□ 2.14
C1orf43-204ENST00000368518 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
C1orf43-204ENST00000368518 ITSN2Q9NZM3 1697 aa28.4■■■□□ 2.14
C1orf43-204ENST00000368518 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
C1orf43-204ENST00000368518 DIP2CQ9Y2E4 1556 aa28.38■■■□□ 2.13
C1orf43-204ENST00000368518 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
C1orf43-204ENST00000368518 GPATCH8Q9UKJ3 1502 aaKnown RBP28.36■■■□□ 2.13
C1orf43-204ENST00000368518 ABCA6Q8N139 1617 aa28.36■■■□□ 2.13
C1orf43-204ENST00000368518 MLH3Q9UHC1 1453 aa28.35■■■□□ 2.13
C1orf43-204ENST00000368518 MTUS2Q5JR59 1369 aa28.35■■■□□ 2.13
C1orf43-204ENST00000368518 HSPA2P54652 639 aa28.33■■■□□ 2.13
C1orf43-204ENST00000368518 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.12
C1orf43-204ENST00000368518 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
C1orf43-204ENST00000368518 CEBPAP49715 358 aaPredicted RBP28.3■■■□□ 2.12
C1orf43-204ENST00000368518 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.12
C1orf43-204ENST00000368518 CFDP1Q9UEE9 299 aaPredicted RBP28.3■■■□□ 2.12
C1orf43-204ENST00000368518 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
C1orf43-204ENST00000368518 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
C1orf43-204ENST00000368518 REREQ9P2R6 1566 aa28.28■■■□□ 2.12
C1orf43-204ENST00000368518 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
C1orf43-204ENST00000368518 SPAG9O60271 1321 aaKnown RBP28.22■■■□□ 2.11
C1orf43-204ENST00000368518 EHBP1L1Q8N3D4 1523 aa28.21■■■□□ 2.11
C1orf43-204ENST00000368518 AGLP35573 1532 aa28.2■■■□□ 2.1
C1orf43-204ENST00000368518 ESF1Q9H501 851 aaKnown RBP28.2■■■□□ 2.1
C1orf43-204ENST00000368518 PLEKHH2Q8IVE3 1493 aa28.19■■■□□ 2.1
C1orf43-204ENST00000368518 TIAM1Q13009 1591 aa28.19■■■□□ 2.1
C1orf43-204ENST00000368518 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
C1orf43-204ENST00000368518 ZNF644Q9H582 1327 aaPredicted RBP28.18■■■□□ 2.1
C1orf43-204ENST00000368518 PREX1Q8TCU6 1659 aa28.16■■■□□ 2.1
C1orf43-204ENST00000368518 ATP7AQ04656 1500 aa28.14■■■□□ 2.1
C1orf43-204ENST00000368518 C3P01024 1663 aa28.12■■■□□ 2.09
C1orf43-204ENST00000368518 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
C1orf43-204ENST00000368518 INO80Q9ULG1 1556 aaPredicted RBP28.1■■■□□ 2.09
C1orf43-204ENST00000368518 UHRF1BP1Q6BDS2 1440 aa28.07■■■□□ 2.08
C1orf43-204ENST00000368518 NCOA2Q15596 1464 aa28.06■■■□□ 2.08
C1orf43-204ENST00000368518 A2MP01023 1474 aa28.05■■■□□ 2.08
C1orf43-204ENST00000368518 MBD5Q9P267 1494 aa28.04■■■□□ 2.08
C1orf43-204ENST00000368518 VPS8Q8N3P4 1428 aa28.04■■■□□ 2.08
C1orf43-204ENST00000368518 FBXO41Q8TF61 875 aa28.04■■■□□ 2.08
C1orf43-204ENST00000368518 CNTLNQ9NXG0 1405 aa28.03■■■□□ 2.08
C1orf43-204ENST00000368518 SETD1BQ9UPS6 1966 aaKnown RBP28.02■■■□□ 2.08
C1orf43-204ENST00000368518 PLXNC1O60486 1568 aa28.01■■■□□ 2.07
C1orf43-204ENST00000368518 GGT6Q6P531 493 aa28■■■□□ 2.07
C1orf43-204ENST00000368518 ADGBQ8N7X0 1667 aa27.98■■■□□ 2.07
C1orf43-204ENST00000368518 CAMSAP2Q08AD1 1489 aa27.97■■■□□ 2.07
C1orf43-204ENST00000368518 ZMYM3Q14202 1370 aa27.97■■■□□ 2.07
C1orf43-204ENST00000368518 CLTCQ00610 1675 aaKnown RBP27.96■■■□□ 2.07
C1orf43-204ENST00000368518 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
C1orf43-204ENST00000368518 MROH2AA6NES4 1674 aa27.95■■■□□ 2.07
C1orf43-204ENST00000368518 STRCQ7RTU9 1775 aa27.94■■■□□ 2.06
C1orf43-204ENST00000368518 RTEL1-TNFRSF6BF6WH68 1400 aa27.93■■■□□ 2.06
C1orf43-204ENST00000368518 CCDC141Q6ZP82 1450 aa27.93■■■□□ 2.06
C1orf43-204ENST00000368518 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
C1orf43-204ENST00000368518 DMRT2Q9Y5R5 561 aa27.89■■■□□ 2.06
C1orf43-204ENST00000368518 DHX29Q7Z478 1369 aaKnown RBP27.88■■■□□ 2.05
C1orf43-204ENST00000368518 NPATQ14207 1427 aa27.88■■■□□ 2.05
C1orf43-204ENST00000368518 CERKQ8TCT0 537 aa27.88■■■□□ 2.05
C1orf43-204ENST00000368518 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
C1orf43-204ENST00000368518 KIF3BO15066 747 aa27.84■■■□□ 2.05
C1orf43-204ENST00000368518 TSPY4P0CV99 314 aa27.83■■■□□ 2.05
C1orf43-204ENST00000368518 TSPY10P0CW01 314 aa27.83■■■□□ 2.05
C1orf43-204ENST00000368518 MAP3K1Q13233 1512 aa27.82■■■□□ 2.04
C1orf43-204ENST00000368518 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
C1orf43-204ENST00000368518 PPP6R1Q9UPN7 881 aa27.82■■■□□ 2.04
C1orf43-204ENST00000368518 PTPRKQ15262 1439 aa27.81■■■□□ 2.04
C1orf43-204ENST00000368518 CAMSAP1Q5T5Y3 1602 aa27.78■■■□□ 2.04
C1orf43-204ENST00000368518 NCOA1Q15788 1441 aa27.78■■■□□ 2.04
C1orf43-204ENST00000368518 MYO3AQ8NEV4 1616 aa27.77■■■□□ 2.04
C1orf43-204ENST00000368518 PTPRTO14522 1441 aa27.76■■■□□ 2.04
C1orf43-204ENST00000368518 APLP2Q06481 763 aa27.76■■■□□ 2.03
C1orf43-204ENST00000368518 MYOM3Q5VTT5 1437 aa27.75■■■□□ 2.03
C1orf43-204ENST00000368518 NCKAP5LQ9HCH0 1330 aa27.73■■■□□ 2.03
C1orf43-204ENST00000368518 WASHC2CQ9Y4E1 1318 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms