RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
EFNA1-201ENST00000368406 PREX2Q70Z35 1606 aa19.71■□□□□ 0.75
EFNA1-201ENST00000368406 ADGRL1O94910 1474 aa19.7■□□□□ 0.74
EFNA1-201ENST00000368406 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
EFNA1-201ENST00000368406 GPATCH8Q9UKJ3 1502 aaKnown RBP19.69■□□□□ 0.74
EFNA1-201ENST00000368406 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
EFNA1-201ENST00000368406 SUPT6HQ7KZ85 1726 aaKnown RBP19.69■□□□□ 0.74
EFNA1-201ENST00000368406 SCAPERQ9BY12 1400 aa19.69■□□□□ 0.74
EFNA1-201ENST00000368406 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
EFNA1-201ENST00000368406 FRMPD1Q5SYB0 1578 aa19.67■□□□□ 0.74
EFNA1-201ENST00000368406 RICTORQ6R327 1708 aa19.66■□□□□ 0.74
EFNA1-201ENST00000368406 POGZQ7Z3K3 1410 aa19.64■□□□□ 0.73
EFNA1-201ENST00000368406 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
EFNA1-201ENST00000368406 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
EFNA1-201ENST00000368406 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
EFNA1-201ENST00000368406 ZMYM4Q5VZL5 1548 aa19.62■□□□□ 0.73
EFNA1-201ENST00000368406 MAGI2Q86UL8 1455 aa19.61■□□□□ 0.73
EFNA1-201ENST00000368406 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
EFNA1-201ENST00000368406 ZNF518AQ6AHZ1 1483 aa19.61■□□□□ 0.73
EFNA1-201ENST00000368406 ABCC1P33527 1531 aa19.6■□□□□ 0.73
EFNA1-201ENST00000368406 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
EFNA1-201ENST00000368406 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.73
EFNA1-201ENST00000368406 KIAA1107Q9UPP5 1409 aa19.58■□□□□ 0.73
EFNA1-201ENST00000368406 ITSN2Q9NZM3 1697 aa19.58■□□□□ 0.73
EFNA1-201ENST00000368406 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
EFNA1-201ENST00000368406 ARHGEF12Q9NZN5 1544 aa19.57■□□□□ 0.72
EFNA1-201ENST00000368406 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
EFNA1-201ENST00000368406 KDM5CP41229 1560 aa19.56■□□□□ 0.72
EFNA1-201ENST00000368406 ARHGEF40Q8TER5 1519 aa19.55■□□□□ 0.72
EFNA1-201ENST00000368406 TRAPPC8Q9Y2L5 1435 aa19.54■□□□□ 0.72
EFNA1-201ENST00000368406 ZFYVE16Q7Z3T8 1539 aa19.54■□□□□ 0.72
EFNA1-201ENST00000368406 KDM4FA0A1W2PPD8 638 aa19.53■□□□□ 0.72
EFNA1-201ENST00000368406 MLH3Q9UHC1 1453 aa19.52■□□□□ 0.72
EFNA1-201ENST00000368406 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.71
EFNA1-201ENST00000368406 YEATS2Q9ULM3 1422 aa19.51■□□□□ 0.71
EFNA1-201ENST00000368406 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
EFNA1-201ENST00000368406 ZNF644Q9H582 1327 aaPredicted RBP19.5■□□□□ 0.71
EFNA1-201ENST00000368406 HECW2Q9P2P5 1572 aa19.48■□□□□ 0.71
EFNA1-201ENST00000368406 ATP10AO60312 1499 aa19.48■□□□□ 0.71
EFNA1-201ENST00000368406 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
EFNA1-201ENST00000368406 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
EFNA1-201ENST00000368406 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
EFNA1-201ENST00000368406 RSPH4AQ5TD94 716 aa19.47■□□□□ 0.71
EFNA1-201ENST00000368406 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
EFNA1-201ENST00000368406 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
EFNA1-201ENST00000368406 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
EFNA1-201ENST00000368406 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
EFNA1-201ENST00000368406 ARID4BQ4LE39 1312 aaPredicted RBP19.44■□□□□ 0.7
EFNA1-201ENST00000368406 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
EFNA1-201ENST00000368406 KIDINS220Q9ULH0 1771 aa19.42■□□□□ 0.7
EFNA1-201ENST00000368406 DIP2CQ9Y2E4 1556 aa19.41■□□□□ 0.7
EFNA1-201ENST00000368406 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
EFNA1-201ENST00000368406 FGD6Q6ZV73 1430 aa19.4■□□□□ 0.7
EFNA1-201ENST00000368406 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
EFNA1-201ENST00000368406 ABCA6Q8N139 1617 aa19.39■□□□□ 0.69
EFNA1-201ENST00000368406 ARHGEF5Q12774 1597 aa19.39■□□□□ 0.69
EFNA1-201ENST00000368406 CCDC141Q6ZP82 1450 aa19.39■□□□□ 0.69
EFNA1-201ENST00000368406 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
EFNA1-201ENST00000368406 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
EFNA1-201ENST00000368406 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
EFNA1-201ENST00000368406 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
EFNA1-201ENST00000368406 SIGLEC1Q9BZZ2 1709 aa19.38■□□□□ 0.69
EFNA1-201ENST00000368406 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
EFNA1-201ENST00000368406 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
EFNA1-201ENST00000368406 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
EFNA1-201ENST00000368406 AGLP35573 1532 aa19.35■□□□□ 0.69
EFNA1-201ENST00000368406 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
EFNA1-201ENST00000368406 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.68
EFNA1-201ENST00000368406 A2MP01023 1474 aa19.3■□□□□ 0.68
EFNA1-201ENST00000368406 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
EFNA1-201ENST00000368406 MLECQ14165 292 aa19.29■□□□□ 0.68
EFNA1-201ENST00000368406 PLXNC1O60486 1568 aa19.28■□□□□ 0.68
EFNA1-201ENST00000368406 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
EFNA1-201ENST00000368406 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
EFNA1-201ENST00000368406 RRBP1Q9P2E9 1410 aaKnown RBP19.27■□□□□ 0.68
EFNA1-201ENST00000368406 PTPRMP28827 1452 aa19.27■□□□□ 0.67
EFNA1-201ENST00000368406 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
EFNA1-201ENST00000368406 ABCC5O15440 1437 aa19.26■□□□□ 0.67
EFNA1-201ENST00000368406 SHANK2Q9UPX8 1470 aa19.25■□□□□ 0.67
EFNA1-201ENST00000368406 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
EFNA1-201ENST00000368406 CROCC2H7BZ55 1655 aa19.25■□□□□ 0.67
EFNA1-201ENST00000368406 DAPK1P53355 1430 aa19.24■□□□□ 0.67
EFNA1-201ENST00000368406 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
EFNA1-201ENST00000368406 ITGAEP38570 1179 aa19.22■□□□□ 0.67
EFNA1-201ENST00000368406 RIMS1Q86UR5 1692 aaKnown RBP19.21■□□□□ 0.67
EFNA1-201ENST00000368406 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
EFNA1-201ENST00000368406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
EFNA1-201ENST00000368406 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
EFNA1-201ENST00000368406 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
EFNA1-201ENST00000368406 KIF3BO15066 747 aa19.16■□□□□ 0.66
EFNA1-201ENST00000368406 GGT6Q6P531 493 aa19.16■□□□□ 0.66
EFNA1-201ENST00000368406 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
EFNA1-201ENST00000368406 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
EFNA1-201ENST00000368406 KIF15Q9NS87 1388 aa19.14■□□□□ 0.65
EFNA1-201ENST00000368406 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
EFNA1-201ENST00000368406 RRP7BPQ9NSQ0 103 aa19.13■□□□□ 0.65
EFNA1-201ENST00000368406 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
EFNA1-201ENST00000368406 CHIC2Q9UKJ5 165 aa19.12■□□□□ 0.65
EFNA1-201ENST00000368406 EIF2AK4Q9P2K8 1649 aaKnown RBP19.12■□□□□ 0.65
EFNA1-201ENST00000368406 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms