RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 MAMSTRQ6ZN01 415 aa10.31□□□□□ -0.76
ECHDC1-204ENST00000368292 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
ECHDC1-204ENST00000368292 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
ECHDC1-204ENST00000368292 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-204ENST00000368292 KIF3CO14782 793 aa10.26□□□□□ -0.77
ECHDC1-204ENST00000368292 NCKAP5LQ9HCH0 1330 aa10.26□□□□□ -0.77
ECHDC1-204ENST00000368292 CRISPLD2Q9H0B8 497 aa10.25□□□□□ -0.77
ECHDC1-204ENST00000368292 C2orf72A6NCS6 295 aa10.23□□□□□ -0.77
ECHDC1-204ENST00000368292 HAP1P54257 671 aaPredicted RBP10.23□□□□□ -0.77
ECHDC1-204ENST00000368292 SLAIN1Q8ND83 568 aa10.23□□□□□ -0.77
ECHDC1-204ENST00000368292 GPHNQ9NQX3 736 aaPredicted RBP10.22□□□□□ -0.77
ECHDC1-204ENST00000368292 CCDC180Q9P1Z9 1646 aa10.2□□□□□ -0.78
ECHDC1-204ENST00000368292 PDE4AP27815 886 aa10.19□□□□□ -0.78
ECHDC1-204ENST00000368292 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
ECHDC1-204ENST00000368292 LARP6Q9BRS8 491 aaKnown RBP10.18□□□□□ -0.78
ECHDC1-204ENST00000368292 DSG2Q14126 1118 aa10.17□□□□□ -0.78
ECHDC1-204ENST00000368292 FOXK1P85037 733 aa10.16□□□□□ -0.78
ECHDC1-204ENST00000368292 MFSD10Q14728 455 aa10.16□□□□□ -0.78
ECHDC1-204ENST00000368292 KDM2AQ9Y2K7 1162 aa10.15□□□□□ -0.78
ECHDC1-204ENST00000368292 DDX27Q96GQ7 796 aaKnown RBP10.13□□□□□ -0.79
ECHDC1-204ENST00000368292 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
ECHDC1-204ENST00000368292 PLPP6Q8IY26 295 aa10.12□□□□□ -0.79
ECHDC1-204ENST00000368292 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-204ENST00000368292 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
ECHDC1-204ENST00000368292 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
ECHDC1-204ENST00000368292 SLC34A2O95436 690 aa10.05□□□□□ -0.8
ECHDC1-204ENST00000368292 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
ECHDC1-204ENST00000368292 SNPHO15079 494 aa10.04□□□□□ -0.8
ECHDC1-204ENST00000368292 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
ECHDC1-204ENST00000368292 RB1CC1Q8TDY2 1594 aa10.02□□□□□ -0.81
ECHDC1-204ENST00000368292 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
ECHDC1-204ENST00000368292 E2F4Q16254 413 aa10.01□□□□□ -0.81
ECHDC1-204ENST00000368292 PTCD2Q8WV60 388 aaKnown RBP10.01□□□□□ -0.81
ECHDC1-204ENST00000368292 LCE2DQ5TA82 110 aaPredicted RBP10□□□□□ -0.81
ECHDC1-204ENST00000368292 OXER1Q8TDS5 423 aa10□□□□□ -0.81
ECHDC1-204ENST00000368292 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
ECHDC1-204ENST00000368292 ST18O60284 1047 aa9.98□□□□□ -0.81
ECHDC1-204ENST00000368292 FAM163AQ96GL9 167 aaPredicted RBP9.98□□□□□ -0.81
ECHDC1-204ENST00000368292 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
ECHDC1-204ENST00000368292 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
ECHDC1-204ENST00000368292 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
ECHDC1-204ENST00000368292 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
ECHDC1-204ENST00000368292 ARSIQ5FYB1 569 aa9.96□□□□□ -0.82
ECHDC1-204ENST00000368292 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
ECHDC1-204ENST00000368292 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.822e-12■■■□□ 17
ECHDC1-204ENST00000368292 KDM4FA0A1W2PPD8 638 aa9.95□□□□□ -0.82
ECHDC1-204ENST00000368292 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
ECHDC1-204ENST00000368292 RIMBP2O15034 1052 aa9.94□□□□□ -0.82
ECHDC1-204ENST00000368292 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-204ENST00000368292 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
ECHDC1-204ENST00000368292 DPYSL4O14531 572 aa9.92□□□□□ -0.82
ECHDC1-204ENST00000368292 TBC1D12O60347 775 aa9.91□□□□□ -0.82
ECHDC1-204ENST00000368292 MAP3K9P80192 1104 aa9.91□□□□□ -0.82
ECHDC1-204ENST00000368292 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.82
ECHDC1-204ENST00000368292 NUDT7P0C024 238 aa9.89□□□□□ -0.83
ECHDC1-204ENST00000368292 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
ECHDC1-204ENST00000368292 CECR2Q9BXF3 1484 aa9.88□□□□□ -0.83
ECHDC1-204ENST00000368292 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-204ENST00000368292 BICRAQ9NZM4 1560 aa9.88□□□□□ -0.83
ECHDC1-204ENST00000368292 EVI5O60447 810 aa9.87□□□□□ -0.83
ECHDC1-204ENST00000368292 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
ECHDC1-204ENST00000368292 BCANQ96GW7 911 aa9.86□□□□□ -0.83
ECHDC1-204ENST00000368292 PDIA6Q15084 440 aa9.85□□□□□ -0.83
ECHDC1-204ENST00000368292 CC2D2AQ9P2K1 1620 aa9.84□□□□□ -0.83
ECHDC1-204ENST00000368292 SPDYE16A6NNV3 312 aaPredicted RBP9.83□□□□□ -0.84
ECHDC1-204ENST00000368292 LHX6Q9UPM6 363 aa9.83□□□□□ -0.84
ECHDC1-204ENST00000368292 ZNF316A6NFI3 1004 aaPredicted RBP9.82□□□□□ -0.84
ECHDC1-204ENST00000368292 EMP3P54852 163 aa9.82□□□□□ -0.84
ECHDC1-204ENST00000368292 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
ECHDC1-204ENST00000368292 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
ECHDC1-204ENST00000368292 PTGER2P43116 358 aa9.8□□□□□ -0.84
ECHDC1-204ENST00000368292 NACADO15069 1562 aa9.78□□□□□ -0.84
ECHDC1-204ENST00000368292 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
ECHDC1-204ENST00000368292 SEMA3EO15041 775 aa9.77□□□□□ -0.85
ECHDC1-204ENST00000368292 ERBB3P21860 1342 aa9.77□□□□□ -0.85
ECHDC1-204ENST00000368292 FOSBP53539 338 aa9.76□□□□□ -0.85
ECHDC1-204ENST00000368292 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
ECHDC1-204ENST00000368292 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
ECHDC1-204ENST00000368292 POTEMA6NI47 508 aa9.75□□□□□ -0.85
ECHDC1-204ENST00000368292 MLLT3P42568 568 aaPredicted RBP9.75□□□□□ -0.85
ECHDC1-204ENST00000368292 DDX12PQ92771 950 aa9.75□□□□□ -0.85
ECHDC1-204ENST00000368292 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
ECHDC1-204ENST00000368292 PCDHGA10Q9Y5H3 936 aa9.75□□□□□ -0.85
ECHDC1-204ENST00000368292 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
ECHDC1-204ENST00000368292 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
ECHDC1-204ENST00000368292 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-204ENST00000368292 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-204ENST00000368292 PHF14O94880 888 aa9.72□□□□□ -0.85
ECHDC1-204ENST00000368292 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-204ENST00000368292 GRXCR2A6NFK2 248 aa9.71□□□□□ -0.86
ECHDC1-204ENST00000368292 PRIM1P49642 420 aaKnown RBP9.71□□□□□ -0.86
ECHDC1-204ENST00000368292 PPP4R3BQ5MIZ7 849 aa9.7□□□□□ -0.86
ECHDC1-204ENST00000368292 OSBPP22059 807 aa9.69□□□□□ -0.86
ECHDC1-204ENST00000368292 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
ECHDC1-204ENST00000368292 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
ECHDC1-204ENST00000368292 ZDHHC16Q969W1 377 aa9.69□□□□□ -0.86
ECHDC1-204ENST00000368292 TYW1BQ6NUM6 668 aa9.68□□□□□ -0.86
ECHDC1-204ENST00000368292 EPAS1Q99814 870 aa9.68□□□□□ -0.86
ECHDC1-204ENST00000368292 NBR1Q14596 966 aa9.67□□□□□ -0.86
ECHDC1-204ENST00000368292 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms