RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-201ENST00000368287 PHF8Q9UPP1 1060 aa11.63□□□□□ -0.55
ECHDC1-201ENST00000368287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-201ENST00000368287 ARSIQ5FYB1 569 aa11.62□□□□□ -0.55
ECHDC1-201ENST00000368287 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-201ENST00000368287 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
ECHDC1-201ENST00000368287 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
ECHDC1-201ENST00000368287 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-201ENST00000368287 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
ECHDC1-201ENST00000368287 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
ECHDC1-201ENST00000368287 NLRP6P59044 892 aa11.53□□□□□ -0.56
ECHDC1-201ENST00000368287 LSM11P83369 360 aaKnown RBP eCLIP11.53□□□□□ -0.56
ECHDC1-201ENST00000368287 PBX2P40425 430 aa11.46□□□□□ -0.57
ECHDC1-201ENST00000368287 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
ECHDC1-201ENST00000368287 NUDT7P0C024 238 aa11.45□□□□□ -0.58
ECHDC1-201ENST00000368287 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
ECHDC1-201ENST00000368287 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
ECHDC1-201ENST00000368287 C2orf72A6NCS6 295 aa11.42□□□□□ -0.58
ECHDC1-201ENST00000368287 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
ECHDC1-201ENST00000368287 KIF3CO14782 793 aa11.41□□□□□ -0.58
ECHDC1-201ENST00000368287 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
ECHDC1-201ENST00000368287 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
ECHDC1-201ENST00000368287 MFRPQ9BY79 579 aa11.39□□□□□ -0.59
ECHDC1-201ENST00000368287 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
ECHDC1-201ENST00000368287 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
ECHDC1-201ENST00000368287 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
ECHDC1-201ENST00000368287 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
ECHDC1-201ENST00000368287 SLC34A2O95436 690 aa11.35□□□□□ -0.59
ECHDC1-201ENST00000368287 STK25O00506 426 aa11.34□□□□□ -0.59
ECHDC1-201ENST00000368287 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
ECHDC1-201ENST00000368287 ADGRD1Q6QNK2 874 aa11.31□□□□□ -0.6
ECHDC1-201ENST00000368287 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
ECHDC1-201ENST00000368287 PSDA5PKW4 1024 aaPredicted RBP11.28□□□□□ -0.6
ECHDC1-201ENST00000368287 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-201ENST00000368287 TK2O00142 265 aa11.21□□□□□ -0.61
ECHDC1-201ENST00000368287 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
ECHDC1-201ENST00000368287 HRO43593 1189 aa11.18□□□□□ -0.62
ECHDC1-201ENST00000368287 PSEN2P49810 448 aa11.18□□□□□ -0.62
ECHDC1-201ENST00000368287 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
ECHDC1-201ENST00000368287 KCTD12Q96CX2 325 aaKnown RBP11.17□□□□□ -0.62
ECHDC1-201ENST00000368287 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
ECHDC1-201ENST00000368287 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
ECHDC1-201ENST00000368287 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
ECHDC1-201ENST00000368287 PPP1R37O75864 691 aa11.15□□□□□ -0.62
ECHDC1-201ENST00000368287 RGL2O15211 777 aa11.12□□□□□ -0.63
ECHDC1-201ENST00000368287 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
ECHDC1-201ENST00000368287 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
ECHDC1-201ENST00000368287 TBC1D12O60347 775 aa11.1□□□□□ -0.63
ECHDC1-201ENST00000368287 FOXK1P85037 733 aa11.1□□□□□ -0.63
ECHDC1-201ENST00000368287 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
ECHDC1-201ENST00000368287 PTPN5P54829 565 aa11.05□□□□□ -0.64
ECHDC1-201ENST00000368287 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
ECHDC1-201ENST00000368287 PKD2Q13563 968 aa11.03□□□□□ -0.64
ECHDC1-201ENST00000368287 DSG2Q14126 1118 aa11.03□□□□□ -0.64
ECHDC1-201ENST00000368287 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
ECHDC1-201ENST00000368287 RGS20O76081 388 aa10.98□□□□□ -0.65
ECHDC1-201ENST00000368287 ZNF454Q8N9F8 522 aa10.98□□□□□ -0.65
ECHDC1-201ENST00000368287 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
ECHDC1-201ENST00000368287 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
ECHDC1-201ENST00000368287 UPF1Q92900 1129 aaKnown RBP eCLIP10.95□□□□□ -0.66
ECHDC1-201ENST00000368287 IRX2Q9BZI1 471 aaPredicted RBP10.95□□□□□ -0.66
ECHDC1-201ENST00000368287 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
ECHDC1-201ENST00000368287 OXER1Q8TDS5 423 aa10.94□□□□□ -0.66
ECHDC1-201ENST00000368287 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
ECHDC1-201ENST00000368287 BCL2L12Q9HB09 334 aa10.94□□□□□ -0.66
ECHDC1-201ENST00000368287 A0A0G2JS52 829 aa10.91□□□□□ -0.66
ECHDC1-201ENST00000368287 PTPREP23469 700 aa10.91□□□□□ -0.66
ECHDC1-201ENST00000368287 WNT2BQ93097 391 aa10.91□□□□□ -0.66
ECHDC1-201ENST00000368287 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
ECHDC1-201ENST00000368287 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
ECHDC1-201ENST00000368287 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
ECHDC1-201ENST00000368287 FOSBP53539 338 aa10.88□□□□□ -0.67
ECHDC1-201ENST00000368287 ZBED2Q9BTP6 218 aa10.87□□□□□ -0.67
ECHDC1-201ENST00000368287 NBPF3Q9H094 633 aa10.85□□□□□ -0.67
ECHDC1-201ENST00000368287 PPP1R15BQ5SWA1 713 aa10.84□□□□□ -0.67
ECHDC1-201ENST00000368287 JPH4Q96JJ6 628 aa10.83□□□□□ -0.68
ECHDC1-201ENST00000368287 CRISPLD2Q9H0B8 497 aa10.82□□□□□ -0.68
ECHDC1-201ENST00000368287 ZDHHC16Q969W1 377 aa10.81□□□□□ -0.68
ECHDC1-201ENST00000368287 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
ECHDC1-201ENST00000368287 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
ECHDC1-201ENST00000368287 EVI5O60447 810 aa10.78□□□□□ -0.68
ECHDC1-201ENST00000368287 ANO8Q9HCE9 1232 aaPredicted RBP10.78□□□□□ -0.68
ECHDC1-201ENST00000368287 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
ECHDC1-201ENST00000368287 ANKK1Q8NFD2 765 aa10.76□□□□□ -0.69
ECHDC1-201ENST00000368287 PDE4AP27815 886 aa10.75□□□□□ -0.69
ECHDC1-201ENST00000368287 NKX1-1Q15270 411 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-201ENST00000368287 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
ECHDC1-201ENST00000368287 ITGBL1O95965 494 aaPredicted RBP10.72□□□□□ -0.69
ECHDC1-201ENST00000368287 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
ECHDC1-201ENST00000368287 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
ECHDC1-201ENST00000368287 Q6ZNB5 142 aa10.71□□□□□ -0.69
ECHDC1-201ENST00000368287 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
ECHDC1-201ENST00000368287 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
ECHDC1-201ENST00000368287 BCAMP50895 628 aa10.69□□□□□ -0.7
ECHDC1-201ENST00000368287 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
ECHDC1-201ENST00000368287 DDX27Q96GQ7 796 aaKnown RBP10.67□□□□□ -0.7
ECHDC1-201ENST00000368287 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
ECHDC1-201ENST00000368287 PCDHGA10Q9Y5H3 936 aa10.66□□□□□ -0.7
ECHDC1-201ENST00000368287 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
ECHDC1-201ENST00000368287 COL9A1P20849 921 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms