RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
CD48-202ENST00000368046 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
CD48-202ENST00000368046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
CD48-202ENST00000368046 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
CD48-202ENST00000368046 NEO1Q92859 1461 aa15.71■□□□□ 0.1
CD48-202ENST00000368046 FYCO1Q9BQS8 1478 aa15.71■□□□□ 0.1
CD48-202ENST00000368046 PLCH2O75038 1416 aa15.69■□□□□ 0.1
CD48-202ENST00000368046 CAPN15O75808 1086 aa15.69■□□□□ 0.1
CD48-202ENST00000368046 RAPGEF3O95398 923 aa15.69■□□□□ 0.1
CD48-202ENST00000368046 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
CD48-202ENST00000368046 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
CD48-202ENST00000368046 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
CD48-202ENST00000368046 AKNAQ7Z591 1439 aa15.67■□□□□ 0.1
CD48-202ENST00000368046 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
CD48-202ENST00000368046 FANCAO15360 1455 aa15.65■□□□□ 0.1
CD48-202ENST00000368046 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
CD48-202ENST00000368046 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
CD48-202ENST00000368046 DENND4BO75064 1496 aaPredicted RBP15.61■□□□□ 0.09
CD48-202ENST00000368046 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
CD48-202ENST00000368046 KIF14Q15058 1648 aa15.61■□□□□ 0.09
CD48-202ENST00000368046 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
CD48-202ENST00000368046 MTUS2Q5JR59 1369 aa15.6■□□□□ 0.09
CD48-202ENST00000368046 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
CD48-202ENST00000368046 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
CD48-202ENST00000368046 CFAP74Q9C0B2 1584 aa15.57■□□□□ 0.08
CD48-202ENST00000368046 ADGRL1O94910 1474 aa15.56■□□□□ 0.08
CD48-202ENST00000368046 ARHGAP5Q13017 1502 aa15.54■□□□□ 0.08
CD48-202ENST00000368046 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
CD48-202ENST00000368046 ZNF777Q9ULD5 760 aaPredicted RBP15.54■□□□□ 0.08
CD48-202ENST00000368046 CCNB3Q8WWL7 1395 aa15.53■□□□□ 0.08
CD48-202ENST00000368046 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
CD48-202ENST00000368046 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
CD48-202ENST00000368046 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
CD48-202ENST00000368046 APLP2Q06481 763 aa15.52■□□□□ 0.08
CD48-202ENST00000368046 MAGI2Q86UL8 1455 aa15.5■□□□□ 0.07
CD48-202ENST00000368046 POGZQ7Z3K3 1410 aa15.5■□□□□ 0.07
CD48-202ENST00000368046 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
CD48-202ENST00000368046 ARID4BQ4LE39 1312 aaPredicted RBP15.49■□□□□ 0.07
CD48-202ENST00000368046 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
CD48-202ENST00000368046 HNRNPMP52272 730 aaKnown RBP eCLIP15.48■□□□□ 0.07
CD48-202ENST00000368046 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
CD48-202ENST00000368046 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
CD48-202ENST00000368046 RICTORQ6R327 1708 aa15.47■□□□□ 0.07
CD48-202ENST00000368046 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
CD48-202ENST00000368046 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
CD48-202ENST00000368046 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
CD48-202ENST00000368046 TIAM1Q13009 1591 aa15.46■□□□□ 0.07
CD48-202ENST00000368046 PREX2Q70Z35 1606 aa15.46■□□□□ 0.06
CD48-202ENST00000368046 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.06
CD48-202ENST00000368046 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
CD48-202ENST00000368046 ZMYM4Q5VZL5 1548 aa15.45■□□□□ 0.06
CD48-202ENST00000368046 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
CD48-202ENST00000368046 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
CD48-202ENST00000368046 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
CD48-202ENST00000368046 KIAA1107Q9UPP5 1409 aa15.43■□□□□ 0.06
CD48-202ENST00000368046 CDC42BPAQ5VT25 1732 aa15.43■□□□□ 0.06
CD48-202ENST00000368046 NCOA2Q15596 1464 aa15.43■□□□□ 0.06
CD48-202ENST00000368046 ZFYVE16Q7Z3T8 1539 aa15.43■□□□□ 0.06
CD48-202ENST00000368046 ATP10AO60312 1499 aa15.42■□□□□ 0.06
CD48-202ENST00000368046 PLEKHH2Q8IVE3 1493 aa15.42■□□□□ 0.06
CD48-202ENST00000368046 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
CD48-202ENST00000368046 RSPH4AQ5TD94 716 aa15.41■□□□□ 0.06
CD48-202ENST00000368046 ABCC1P33527 1531 aa15.41■□□□□ 0.06
CD48-202ENST00000368046 SPAG9O60271 1321 aaKnown RBP15.4■□□□□ 0.06
CD48-202ENST00000368046 KDM5CP41229 1560 aa15.39■□□□□ 0.05
CD48-202ENST00000368046 ARHGEF40Q8TER5 1519 aa15.38■□□□□ 0.05
CD48-202ENST00000368046 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
CD48-202ENST00000368046 SAMD9LQ8IVG5 1584 aa15.38■□□□□ 0.05
CD48-202ENST00000368046 MLECQ14165 292 aa15.37■□□□□ 0.05
CD48-202ENST00000368046 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
CD48-202ENST00000368046 MBD5Q9P267 1494 aa15.35■□□□□ 0.05
CD48-202ENST00000368046 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
CD48-202ENST00000368046 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
CD48-202ENST00000368046 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
CD48-202ENST00000368046 ITSN2Q9NZM3 1697 aa15.33■□□□□ 0.04
CD48-202ENST00000368046 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
CD48-202ENST00000368046 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
CD48-202ENST00000368046 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
CD48-202ENST00000368046 ADAMTSL3P82987 1691 aa15.31■□□□□ 0.04
CD48-202ENST00000368046 BCORL1Q5H9F3 1711 aa15.31■□□□□ 0.04
CD48-202ENST00000368046 RTEL1-TNFRSF6BF6WH68 1400 aa15.3■□□□□ 0.04
CD48-202ENST00000368046 KCNA4P22459 653 aa15.3■□□□□ 0.04
CD48-202ENST00000368046 PTPRMP28827 1452 aa15.3■□□□□ 0.04
CD48-202ENST00000368046 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
CD48-202ENST00000368046 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
CD48-202ENST00000368046 KIDINS220Q9ULH0 1771 aa15.29■□□□□ 0.04
CD48-202ENST00000368046 ABCB7O75027 752 aa15.28■□□□□ 0.04
CD48-202ENST00000368046 REREQ9P2R6 1566 aa15.28■□□□□ 0.04
CD48-202ENST00000368046 ESF1Q9H501 851 aaKnown RBP15.27■□□□□ 0.04
CD48-202ENST00000368046 AGLP35573 1532 aa15.27■□□□□ 0.03
CD48-202ENST00000368046 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.03
CD48-202ENST00000368046 SIGLEC1Q9BZZ2 1709 aa15.26■□□□□ 0.03
CD48-202ENST00000368046 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
CD48-202ENST00000368046 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
CD48-202ENST00000368046 DHX29Q7Z478 1369 aaKnown RBP15.24■□□□□ 0.03
CD48-202ENST00000368046 A2MP01023 1474 aa15.24■□□□□ 0.03
CD48-202ENST00000368046 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
CD48-202ENST00000368046 GGT6Q6P531 493 aa15.23■□□□□ 0.03
CD48-202ENST00000368046 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
CD48-202ENST00000368046 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms