RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 MTUS2Q5JR59 1369 aa38.12■■■■□ 3.69
PFDN2-201ENST00000368010 VPS8Q8N3P4 1428 aa38.11■■■■□ 3.69
PFDN2-201ENST00000368010 PREX2Q70Z35 1606 aa38.1■■■■□ 3.69
PFDN2-201ENST00000368010 POGZQ7Z3K3 1410 aa38.07■■■■□ 3.69
PFDN2-201ENST00000368010 CDC42BPBQ9Y5S2 1711 aa38.06■■■■□ 3.68
PFDN2-201ENST00000368010 ZMYM4Q5VZL5 1548 aa38.06■■■■□ 3.68
PFDN2-201ENST00000368010 EHBP1L1Q8N3D4 1523 aa38.03■■■■□ 3.68
PFDN2-201ENST00000368010 ARHGEF40Q8TER5 1519 aa38.02■■■■□ 3.68
PFDN2-201ENST00000368010 CDC42BPAQ5VT25 1732 aa38.01■■■■□ 3.67
PFDN2-201ENST00000368010 MAGI2Q86UL8 1455 aa37.98■■■■□ 3.67
PFDN2-201ENST00000368010 GPATCH8Q9UKJ3 1502 aaKnown RBP37.97■■■■□ 3.67
PFDN2-201ENST00000368010 ZFYVE16Q7Z3T8 1539 aa37.96■■■■□ 3.67
PFDN2-201ENST00000368010 ZNF518AQ6AHZ1 1483 aa37.94■■■■□ 3.66
PFDN2-201ENST00000368010 CCNB3Q8WWL7 1395 aa37.93■■■■□ 3.66
PFDN2-201ENST00000368010 TIAM1Q13009 1591 aa37.93■■■■□ 3.66
PFDN2-201ENST00000368010 ABCC1P33527 1531 aa37.92■■■■□ 3.66
PFDN2-201ENST00000368010 YEATS2Q9ULM3 1422 aa37.9■■■■□ 3.66
PFDN2-201ENST00000368010 KDM5CP41229 1560 aa37.86■■■■□ 3.65
PFDN2-201ENST00000368010 ZNF777Q9ULD5 760 aaPredicted RBP37.86■■■■□ 3.65
PFDN2-201ENST00000368010 ARID4BQ4LE39 1312 aaPredicted RBP37.86■■■■□ 3.65
PFDN2-201ENST00000368010 AFAP1Q8N556 730 aa37.85■■■■□ 3.65
PFDN2-201ENST00000368010 CFDP1Q9UEE9 299 aaPredicted RBP37.85■■■■□ 3.65
PFDN2-201ENST00000368010 ARHGEF12Q9NZN5 1544 aa37.84■■■■□ 3.65
PFDN2-201ENST00000368010 ITSN2Q9NZM3 1697 aa37.83■■■■□ 3.65
PFDN2-201ENST00000368010 SAMD9LQ8IVG5 1584 aa37.83■■■■□ 3.65
PFDN2-201ENST00000368010 TRAPPC8Q9Y2L5 1435 aa37.8■■■■□ 3.64
PFDN2-201ENST00000368010 SUPT6HQ7KZ85 1726 aaKnown RBP37.8■■■■□ 3.64
PFDN2-201ENST00000368010 MAP3K1Q13233 1512 aa37.8■■■■□ 3.64
PFDN2-201ENST00000368010 NCOA2Q15596 1464 aa37.77■■■■□ 3.64
PFDN2-201ENST00000368010 LRRC9Q6ZRR7 1453 aa37.77■■■■□ 3.64
PFDN2-201ENST00000368010 HECW2Q9P2P5 1572 aa37.77■■■■□ 3.64
PFDN2-201ENST00000368010 PLEKHH2Q8IVE3 1493 aa37.77■■■■□ 3.64
PFDN2-201ENST00000368010 MYT1LQ9UL68 1186 aa37.76■■■■□ 3.64
PFDN2-201ENST00000368010 ATP10AO60312 1499 aa37.75■■■■□ 3.63
PFDN2-201ENST00000368010 SYCP2Q9BX26 1530 aa37.75■■■■□ 3.63
PFDN2-201ENST00000368010 BCORL1Q5H9F3 1711 aa37.74■■■■□ 3.63
PFDN2-201ENST00000368010 MLH3Q9UHC1 1453 aa37.74■■■■□ 3.63
PFDN2-201ENST00000368010 ADAMTSL3P82987 1691 aa37.72■■■■□ 3.63
PFDN2-201ENST00000368010 C9orf84Q5VXU9 1444 aa37.72■■■■□ 3.63
PFDN2-201ENST00000368010 KIAA1107Q9UPP5 1409 aa37.72■■■■□ 3.63
PFDN2-201ENST00000368010 HNRNPMP52272 730 aaKnown RBP eCLIP37.68■■■■□ 3.62
PFDN2-201ENST00000368010 SIGLEC1Q9BZZ2 1709 aa37.67■■■■□ 3.62
PFDN2-201ENST00000368010 APLP2Q06481 763 aa37.66■■■■□ 3.62
PFDN2-201ENST00000368010 DIP2CQ9Y2E4 1556 aa37.66■■■■□ 3.62
PFDN2-201ENST00000368010 KANK4Q5T7N3 995 aaPredicted RBP37.65■■■■□ 3.62
PFDN2-201ENST00000368010 ABCA6Q8N139 1617 aa37.62■■■■□ 3.61
PFDN2-201ENST00000368010 ZNF644Q9H582 1327 aaPredicted RBP37.61■■■■□ 3.61
PFDN2-201ENST00000368010 MADDQ8WXG6 1647 aa37.61■■■■□ 3.61
PFDN2-201ENST00000368010 REREQ9P2R6 1566 aa37.59■■■■□ 3.61
PFDN2-201ENST00000368010 SPAG9O60271 1321 aaKnown RBP37.59■■■■□ 3.61
PFDN2-201ENST00000368010 KIDINS220Q9ULH0 1771 aa37.58■■■■□ 3.61
PFDN2-201ENST00000368010 PTPRMP28827 1452 aa37.58■■■■□ 3.61
PFDN2-201ENST00000368010 MLECQ14165 292 aa37.55■■■■□ 3.6
PFDN2-201ENST00000368010 MBD5Q9P267 1494 aa37.53■■■■□ 3.6
PFDN2-201ENST00000368010 CAMSAP2Q08AD1 1489 aa37.52■■■■□ 3.6
PFDN2-201ENST00000368010 ATP7AQ04656 1500 aa37.51■■■■□ 3.6
PFDN2-201ENST00000368010 INO80Q9ULG1 1556 aaPredicted RBP37.5■■■■□ 3.59
PFDN2-201ENST00000368010 RIMS1Q86UR5 1692 aaKnown RBP37.5■■■■□ 3.59
PFDN2-201ENST00000368010 AGLP35573 1532 aa37.46■■■■□ 3.59
PFDN2-201ENST00000368010 MYOM3Q5VTT5 1437 aa37.44■■■■□ 3.58
PFDN2-201ENST00000368010 CCDC141Q6ZP82 1450 aa37.44■■■■□ 3.58
PFDN2-201ENST00000368010 FER1L4A9Z1Z3 1794 aa37.42■■■■□ 3.58
PFDN2-201ENST00000368010 MIA2Q96PC5 1412 aa37.42■■■■□ 3.58
PFDN2-201ENST00000368010 RSPH4AQ5TD94 716 aa37.41■■■■□ 3.58
PFDN2-201ENST00000368010 RTEL1-TNFRSF6BF6WH68 1400 aa37.38■■■■□ 3.57
PFDN2-201ENST00000368010 ARHGEF5Q12774 1597 aa37.36■■■■□ 3.57
PFDN2-201ENST00000368010 A2MP01023 1474 aa37.35■■■■□ 3.57
PFDN2-201ENST00000368010 PLXNC1O60486 1568 aa37.31■■■■□ 3.56
PFDN2-201ENST00000368010 ADGBQ8N7X0 1667 aa37.29■■■■□ 3.56
PFDN2-201ENST00000368010 PLPPR3Q6T4P5 718 aa37.29■■■■□ 3.56
PFDN2-201ENST00000368010 TSPY4P0CV99 314 aa37.26■■■■□ 3.56
PFDN2-201ENST00000368010 TSPY10P0CW01 314 aa37.26■■■■□ 3.56
PFDN2-201ENST00000368010 ESF1Q9H501 851 aaKnown RBP37.24■■■■□ 3.55
PFDN2-201ENST00000368010 FGD6Q6ZV73 1430 aa37.2■■■■□ 3.55
PFDN2-201ENST00000368010 PTPN23Q9H3S7 1636 aa37.19■■■■□ 3.54
PFDN2-201ENST00000368010 DHX29Q7Z478 1369 aaKnown RBP37.18■■■■□ 3.54
PFDN2-201ENST00000368010 MAST1Q9Y2H9 1570 aa37.17■■■■□ 3.54
PFDN2-201ENST00000368010 CNTLNQ9NXG0 1405 aa37.17■■■■□ 3.54
PFDN2-201ENST00000368010 CEBPAP49715 358 aaPredicted RBP37.14■■■■□ 3.54
PFDN2-201ENST00000368010 TCOF1Q13428 1488 aaKnown RBP37.13■■■■□ 3.53
PFDN2-201ENST00000368010 LMTK3Q96Q04 1460 aa37.12■■■■□ 3.53
PFDN2-201ENST00000368010 GGT6Q6P531 493 aa37.11■■■■□ 3.53
PFDN2-201ENST00000368010 C3P01024 1663 aa37.07■■■■□ 3.52
PFDN2-201ENST00000368010 ABCC5O15440 1437 aa37.06■■■■□ 3.52
PFDN2-201ENST00000368010 SHANK2Q9UPX8 1470 aa37.05■■■■□ 3.52
PFDN2-201ENST00000368010 PPP6R1Q9UPN7 881 aa37.04■■■■□ 3.52
PFDN2-201ENST00000368010 MROH2AA6NES4 1674 aa37.04■■■■□ 3.52
PFDN2-201ENST00000368010 KIF3BO15066 747 aa37.03■■■■□ 3.52
PFDN2-201ENST00000368010 DAPK1P53355 1430 aa37.02■■■■□ 3.52
PFDN2-201ENST00000368010 DNMT1P26358 1616 aaKnown RBP37.02■■■■□ 3.52
PFDN2-201ENST00000368010 CROCC2H7BZ55 1655 aa37.02■■■■□ 3.52
PFDN2-201ENST00000368010 CLTCQ00610 1675 aaKnown RBP36.99■■■■□ 3.51
PFDN2-201ENST00000368010 ZMYM3Q14202 1370 aa36.99■■■■□ 3.51
PFDN2-201ENST00000368010 PREX1Q8TCU6 1659 aa36.98■■■■□ 3.51
PFDN2-201ENST00000368010 FAM50AQ14320 339 aaKnown RBP36.93■■■■□ 3.5
PFDN2-201ENST00000368010 UHRF1BP1Q6BDS2 1440 aa36.93■■■■□ 3.5
PFDN2-201ENST00000368010 DUOX2Q9NRD8 1548 aa36.92■■■■□ 3.5
PFDN2-201ENST00000368010 HSPA2P54652 639 aa36.92■■■■□ 3.5
PFDN2-201ENST00000368010 FAM135AQ9P2D6 1515 aa36.91■■■■□ 3.5
PFDN2-201ENST00000368010 KIF15Q9NS87 1388 aa36.91■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms