RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 CERS3Q8IU89 383 aa6.58□□□□□ -1.36
RC3H1-202ENST00000367694 FAM193AP78312 1265 aa6.57□□□□□ -1.36
RC3H1-202ENST00000367694 NBPF20Q3BBV1 942 aa6.57□□□□□ -1.36
RC3H1-202ENST00000367694 ANP32BQ92688 251 aaKnown RBP6.57□□□□□ -1.36
RC3H1-202ENST00000367694 POLR3GLQ9BT43 218 aa6.56□□□□□ -1.36
RC3H1-202ENST00000367694 HSP90AA1P07900 732 aaKnown RBP6.56□□□□□ -1.36
RC3H1-202ENST00000367694 YY1AP1Q9H869 796 aa6.56□□□□□ -1.36
RC3H1-202ENST00000367694 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
RC3H1-202ENST00000367694 KDM2AQ9Y2K7 1162 aa6.54□□□□□ -1.36
RC3H1-202ENST00000367694 PAK3O75914 559 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-202ENST00000367694 TRIM44Q96DX7 344 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-202ENST00000367694 IRX3P78415 501 aaPredicted RBP6.53□□□□□ -1.36
RC3H1-202ENST00000367694 CFAP65Q6ZU64 1925 aaKnown RBP6.53□□□□□ -1.36
RC3H1-202ENST00000367694 SOX12O15370 315 aa6.53□□□□□ -1.36
RC3H1-202ENST00000367694 DMTNQ08495 405 aa6.52□□□□□ -1.37
RC3H1-202ENST00000367694 CFAP44Q96MT7 982 aa6.52□□□□□ -1.37
RC3H1-202ENST00000367694 HDAC5Q9UQL6 1122 aa6.52□□□□□ -1.37
RC3H1-202ENST00000367694 EGFL6Q8IUX8 553 aa6.52□□□□□ -1.37
RC3H1-202ENST00000367694 NCAPD3P42695 1498 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 CLCN1P35523 988 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 FBLN2P98095 1184 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 RTL5Q5HYW3 569 aaPredicted RBP6.51□□□□□ -1.37
RC3H1-202ENST00000367694 NBPF11Q86T75 865 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 CC2D2AQ9P2K1 1620 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 PTMSP20962 102 aa6.51□□□□□ -1.37
RC3H1-202ENST00000367694 IGF1RP08069 1367 aa6.5□□□□□ -1.37
RC3H1-202ENST00000367694 DDRGK1Q96HY6 314 aa6.5□□□□□ -1.37
RC3H1-202ENST00000367694 GEMIN8Q9NWZ8 242 aaKnown RBP6.5□□□□□ -1.37
RC3H1-202ENST00000367694 EIF4G1Q04637 1599 aaKnown RBP6.5□□□□□ -1.37
RC3H1-202ENST00000367694 KIF20AO95235 890 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 ANAPC15P60006 121 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 NBPF1Q3BBV0 1214 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 TAF3Q5VWG9 929 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 RRAGDQ9NQL2 400 aaPredicted RBP6.49□□□□□ -1.37
RC3H1-202ENST00000367694 SH3BP1Q9Y3L3 701 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 ANP32AP39687 249 aaKnown RBP6.49□□□□□ -1.37
RC3H1-202ENST00000367694 GSE1Q14687 1217 aa6.49□□□□□ -1.37
RC3H1-202ENST00000367694 TPM2P07951 284 aa6.48□□□□□ -1.37
RC3H1-202ENST00000367694 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.48□□□□□ -1.37
RC3H1-202ENST00000367694 MKL1Q969V6 931 aa6.48□□□□□ -1.37
RC3H1-202ENST00000367694 PPP4R3BQ5MIZ7 849 aa6.48□□□□□ -1.37
RC3H1-202ENST00000367694 IPO9Q96P70 1041 aaKnown RBP6.48□□□□□ -1.37
RC3H1-202ENST00000367694 TTC36A6NLP5 189 aa6.48□□□□□ -1.37
RC3H1-202ENST00000367694 ZBTB22O15209 634 aa6.47□□□□□ -1.37
RC3H1-202ENST00000367694 MAP7D2Q96T17 732 aa6.47□□□□□ -1.37
RC3H1-202ENST00000367694 TERF1P54274 439 aa6.47□□□□□ -1.37
RC3H1-202ENST00000367694 NBR1Q14596 966 aa6.46□□□□□ -1.37
RC3H1-202ENST00000367694 GPATCH11Q8N954 259 aa6.46□□□□□ -1.37
RC3H1-202ENST00000367694 MYCNP04198 464 aaPredicted RBP6.46□□□□□ -1.38
RC3H1-202ENST00000367694 SLC4A1APQ9BWU0 796 aaKnown RBP6.46□□□□□ -1.38
RC3H1-202ENST00000367694 PLCD3Q8N3E9 789 aa6.45□□□□□ -1.38
RC3H1-202ENST00000367694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.384e-6■■□□□ 11.7
RC3H1-202ENST00000367694 NECTIN2Q92692 538 aa6.44□□□□□ -1.38
RC3H1-202ENST00000367694 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
RC3H1-202ENST00000367694 SCRIBQ14160 1630 aa6.43□□□□□ -1.38
RC3H1-202ENST00000367694 FKBP8Q14318 412 aa6.43□□□□□ -1.38
RC3H1-202ENST00000367694 DCAF11Q8TEB1 546 aa6.43□□□□□ -1.38
RC3H1-202ENST00000367694 TCERG1O14776 1098 aaKnown RBP6.43□□□□□ -1.38
RC3H1-202ENST00000367694 IRF6O14896 467 aa6.43□□□□□ -1.38
RC3H1-202ENST00000367694 ZSCAN20P17040 1043 aaPredicted RBP6.43□□□□□ -1.38
RC3H1-202ENST00000367694 BSDC1Q9NW68 430 aaPredicted RBP6.43□□□□□ -1.38
RC3H1-202ENST00000367694 CCDC27Q2M243 656 aa6.42□□□□□ -1.38
RC3H1-202ENST00000367694 NBPF9Q3BBW0 867 aa6.42□□□□□ -1.38
RC3H1-202ENST00000367694 GTPBP4Q9BZE4 634 aaKnown RBP6.42□□□□□ -1.38
RC3H1-202ENST00000367694 GOLGA6L3A6NEY3 463 aa6.42□□□□□ -1.38
RC3H1-202ENST00000367694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.42□□□□□ -1.38
RC3H1-202ENST00000367694 RALBP1Q15311 655 aa6.42□□□□□ -1.38
RC3H1-202ENST00000367694 DISP3Q9P2K9 1392 aa6.42□□□□□ -1.38
RC3H1-202ENST00000367694 PLEKHD1A6NEE1 506 aa6.41□□□□□ -1.38
RC3H1-202ENST00000367694 NBPF10Q6P3W6 841 aaKnown RBP6.41□□□□□ -1.38
RC3H1-202ENST00000367694 LETM1O95202 739 aaPredicted RBP6.41□□□□□ -1.38
RC3H1-202ENST00000367694 TSHZ1Q6ZSZ6 1077 aa6.41□□□□□ -1.38
RC3H1-202ENST00000367694 OTUD6BQ8N6M0 293 aa6.41□□□□□ -1.38
RC3H1-202ENST00000367694 RAI14Q9P0K7 980 aa6.41□□□□□ -1.38
RC3H1-202ENST00000367694 PEG3Q9GZU2 1588 aa6.41□□□□□ -1.38
RC3H1-202ENST00000367694 PATL2C9JE40 543 aaKnown RBP6.4□□□□□ -1.38
RC3H1-202ENST00000367694 CCDC96Q2M329 555 aa6.4□□□□□ -1.38
RC3H1-202ENST00000367694 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
RC3H1-202ENST00000367694 CADPSQ9ULU8 1353 aa6.4□□□□□ -1.39
RC3H1-202ENST00000367694 CUX2O14529 1486 aa6.4□□□□□ -1.39
RC3H1-202ENST00000367694 HSP90AB4PQ58FF6 505 aa6.39□□□□□ -1.39
RC3H1-202ENST00000367694 HSP90AB3PQ58FF7 597 aa6.39□□□□□ -1.39
RC3H1-202ENST00000367694 MTERF4Q7Z6M4 381 aaKnown RBP6.39□□□□□ -1.39
RC3H1-202ENST00000367694 BORCS6Q96GS4 357 aa6.39□□□□□ -1.39
RC3H1-202ENST00000367694 VGLL3A8MV65 326 aa6.39□□□□□ -1.39
RC3H1-202ENST00000367694 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-202ENST00000367694 NGEFQ8N5V2 710 aa6.38□□□□□ -1.39
RC3H1-202ENST00000367694 LMTK3Q96Q04 1460 aa6.38□□□□□ -1.39
RC3H1-202ENST00000367694 SEMA3FQ13275 785 aa6.38□□□□□ -1.39
RC3H1-202ENST00000367694 OS9Q13438 667 aaPredicted RBP6.38□□□□□ -1.39
RC3H1-202ENST00000367694 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
RC3H1-202ENST00000367694 LAS1LQ9Y4W2 734 aaKnown RBP6.37□□□□□ -1.39
RC3H1-202ENST00000367694 RAD50Q92878 1312 aa6.37□□□□□ -1.39
RC3H1-202ENST00000367694 CC2D1BQ5T0F9 858 aaKnown RBP6.37□□□□□ -1.39
RC3H1-202ENST00000367694 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
RC3H1-202ENST00000367694 HMGXB3Q12766 1538 aa6.36□□□□□ -1.39
RC3H1-202ENST00000367694 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
RC3H1-202ENST00000367694 ANKRD23Q86SG2 305 aa6.36□□□□□ -1.39
RC3H1-202ENST00000367694 FRAT1Q92837 279 aaPredicted RBP6.36□□□□□ -1.39
RC3H1-202ENST00000367694 EEA1Q15075 1411 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms