RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 TAOK2Q9UL54 1235 aa17.55■□□□□ 0.4
CFHR3-202ENST00000367427 ZSWIM6Q9HCJ5 1215 aa17.52■□□□□ 0.4
CFHR3-202ENST00000367427 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
CFHR3-202ENST00000367427 GPR153Q6NV75 609 aa17.5■□□□□ 0.39
CFHR3-202ENST00000367427 MFRPQ9BY79 579 aa17.5■□□□□ 0.39
CFHR3-202ENST00000367427 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
CFHR3-202ENST00000367427 ERBB3P21860 1342 aa17.49■□□□□ 0.39
CFHR3-202ENST00000367427 PKD2Q13563 968 aa17.48■□□□□ 0.39
CFHR3-202ENST00000367427 ECM2O94769 699 aaPredicted RBP17.47■□□□□ 0.39
CFHR3-202ENST00000367427 STK25O00506 426 aa17.43■□□□□ 0.38
CFHR3-202ENST00000367427 RGL2O15211 777 aa17.41■□□□□ 0.38
CFHR3-202ENST00000367427 VARS2Q5ST30 1063 aaKnown RBP17.41■□□□□ 0.38
CFHR3-202ENST00000367427 KIF3CO14782 793 aa17.37■□□□□ 0.37
CFHR3-202ENST00000367427 ZNF687Q8N1G0 1237 aa17.35■□□□□ 0.37
CFHR3-202ENST00000367427 ARSIQ5FYB1 569 aa17.34■□□□□ 0.37
CFHR3-202ENST00000367427 C2orf72A6NCS6 295 aa17.28■□□□□ 0.36
CFHR3-202ENST00000367427 KHSRPQ92945 711 aaKnown RBP eCLIP17.27■□□□□ 0.36
CFHR3-202ENST00000367427 ZNF316A6NFI3 1004 aaPredicted RBP17.22■□□□□ 0.35
CFHR3-202ENST00000367427 PPP1R37O75864 691 aa17.2■□□□□ 0.34
CFHR3-202ENST00000367427 SLC34A2O95436 690 aa17.17■□□□□ 0.34
CFHR3-202ENST00000367427 RNF166Q96A37 237 aaPredicted RBP17.12■□□□□ 0.33
CFHR3-202ENST00000367427 NUDT7P0C024 238 aa17.1■□□□□ 0.33
CFHR3-202ENST00000367427 TMC2Q8TDI7 906 aa17.1■□□□□ 0.33
CFHR3-202ENST00000367427 PCDHGA4Q9Y5G9 962 aa17.1■□□□□ 0.33
CFHR3-202ENST00000367427 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
CFHR3-202ENST00000367427 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CFHR3-202ENST00000367427 HS6ST3Q8IZP7 471 aa17.05■□□□□ 0.32
CFHR3-202ENST00000367427 LHX6Q9UPM6 363 aa17.05■□□□□ 0.32
CFHR3-202ENST00000367427 PTGER2P43116 358 aa17.03■□□□□ 0.32
CFHR3-202ENST00000367427 POTEEQ6S8J3 1075 aa17.03■□□□□ 0.32
CFHR3-202ENST00000367427 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
CFHR3-202ENST00000367427 LSM11P83369 360 aaKnown RBP eCLIP17.02■□□□□ 0.32
CFHR3-202ENST00000367427 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
CFHR3-202ENST00000367427 KDM4FA0A1W2PPD8 638 aa17■□□□□ 0.31
CFHR3-202ENST00000367427 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
CFHR3-202ENST00000367427 PBX2P40425 430 aa16.97■□□□□ 0.31
CFHR3-202ENST00000367427 PTCD2Q8WV60 388 aaKnown RBP16.95■□□□□ 0.3
CFHR3-202ENST00000367427 FOXK1P85037 733 aa16.94■□□□□ 0.3
CFHR3-202ENST00000367427 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
CFHR3-202ENST00000367427 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
CFHR3-202ENST00000367427 AXIN2Q9Y2T1 843 aa16.91■□□□□ 0.3
CFHR3-202ENST00000367427 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
CFHR3-202ENST00000367427 PLPP6Q8IY26 295 aa16.88■□□□□ 0.29
CFHR3-202ENST00000367427 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
CFHR3-202ENST00000367427 DSG2Q14126 1118 aa16.85■□□□□ 0.29
CFHR3-202ENST00000367427 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
CFHR3-202ENST00000367427 ARHGAP33O14559 1287 aa16.81■□□□□ 0.28
CFHR3-202ENST00000367427 ADGRD1Q6QNK2 874 aa16.75■□□□□ 0.27
CFHR3-202ENST00000367427 CRISPLD2Q9H0B8 497 aa16.72■□□□□ 0.27
CFHR3-202ENST00000367427 TBC1D12O60347 775 aa16.71■□□□□ 0.27
CFHR3-202ENST00000367427 DMRTA1Q5VZB9 504 aa16.71■□□□□ 0.27
CFHR3-202ENST00000367427 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
CFHR3-202ENST00000367427 TK2O00142 265 aa16.69■□□□□ 0.26
CFHR3-202ENST00000367427 PSEN2P49810 448 aa16.69■□□□□ 0.26
CFHR3-202ENST00000367427 HRO43593 1189 aa16.68■□□□□ 0.26
CFHR3-202ENST00000367427 RYDENQ9NUL5 291 aaKnown RBP16.68■□□□□ 0.26
CFHR3-202ENST00000367427 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
CFHR3-202ENST00000367427 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
CFHR3-202ENST00000367427 HCSTQ9UBK5 93 aa16.6■□□□□ 0.25
CFHR3-202ENST00000367427 GTPBP6O43824 516 aaPredicted RBP16.59■□□□□ 0.25
CFHR3-202ENST00000367427 PPP1R15BQ5SWA1 713 aa16.59■□□□□ 0.25
CFHR3-202ENST00000367427 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
CFHR3-202ENST00000367427 PDE4AP27815 886 aa16.54■□□□□ 0.24
CFHR3-202ENST00000367427 KCNK17Q96T54 332 aa16.53■□□□□ 0.24
CFHR3-202ENST00000367427 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
CFHR3-202ENST00000367427 FOSBP53539 338 aa16.49■□□□□ 0.23
CFHR3-202ENST00000367427 ZNF454Q8N9F8 522 aa16.49■□□□□ 0.23
CFHR3-202ENST00000367427 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
CFHR3-202ENST00000367427 PLA2G2EQ9NZK7 142 aa16.49■□□□□ 0.23
CFHR3-202ENST00000367427 VPS9D1Q9Y2B5 631 aa16.49■□□□□ 0.23
CFHR3-202ENST00000367427 SLC4A5Q9BY07 1137 aa16.46■□□□□ 0.23
CFHR3-202ENST00000367427 MFSD10Q14728 455 aa16.44■□□□□ 0.22
CFHR3-202ENST00000367427 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
CFHR3-202ENST00000367427 LARP6Q9BRS8 491 aaKnown RBP16.43■□□□□ 0.22
CFHR3-202ENST00000367427 KCTD12Q96CX2 325 aaKnown RBP16.42■□□□□ 0.22
CFHR3-202ENST00000367427 EVI5O60447 810 aa16.41■□□□□ 0.22
CFHR3-202ENST00000367427 BHMG1C9JSJ3 638 aaPredicted RBP16.4■□□□□ 0.22
CFHR3-202ENST00000367427 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
CFHR3-202ENST00000367427 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
CFHR3-202ENST00000367427 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
CFHR3-202ENST00000367427 PTPREP23469 700 aa16.36■□□□□ 0.21
CFHR3-202ENST00000367427 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
CFHR3-202ENST00000367427 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
CFHR3-202ENST00000367427 ADAM33Q9BZ11 813 aa16.34■□□□□ 0.21
CFHR3-202ENST00000367427 ZDHHC16Q969W1 377 aa16.33■□□□□ 0.2
CFHR3-202ENST00000367427 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
CFHR3-202ENST00000367427 MAP3K9P80192 1104 aa16.3■□□□□ 0.2
CFHR3-202ENST00000367427 PCDHGA10Q9Y5H3 936 aa16.25■□□□□ 0.19
CFHR3-202ENST00000367427 PTPN5P54829 565 aa16.23■□□□□ 0.19
CFHR3-202ENST00000367427 THSD4Q6ZMP0 1018 aa16.23■□□□□ 0.19
CFHR3-202ENST00000367427 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
CFHR3-202ENST00000367427 MRPL50Q8N5N7 158 aaKnown RBP16.19■□□□□ 0.18
CFHR3-202ENST00000367427 CAMK2BQ13554 666 aa16.18■□□□□ 0.18
CFHR3-202ENST00000367427 PPP1R3GB7ZBB8 358 aa16.17■□□□□ 0.18
CFHR3-202ENST00000367427 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
CFHR3-202ENST00000367427 WNT2BQ93097 391 aa16.17■□□□□ 0.18
CFHR3-202ENST00000367427 PHF14O94880 888 aa16.15■□□□□ 0.18
CFHR3-202ENST00000367427 COL9A1P20849 921 aa16.15■□□□□ 0.18
CFHR3-202ENST00000367427 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
CFHR3-202ENST00000367427 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms