RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 MAP3K4Q9Y6R4 1608 aa15.55■□□□□ 0.08
NUP43-202ENST00000367402 APLP2Q06481 763 aa15.55■□□□□ 0.08
NUP43-202ENST00000367402 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
NUP43-202ENST00000367402 TEX14Q8IWB6 1497 aa15.54■□□□□ 0.08
NUP43-202ENST00000367402 MTUS2Q5JR59 1369 aa15.53■□□□□ 0.08
NUP43-202ENST00000367402 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
NUP43-202ENST00000367402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.53■□□□□ 0.08
NUP43-202ENST00000367402 CFAP43Q8NDM7 1665 aa15.52■□□□□ 0.08
NUP43-202ENST00000367402 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.07
NUP43-202ENST00000367402 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
NUP43-202ENST00000367402 KIF14Q15058 1648 aa15.49■□□□□ 0.07
NUP43-202ENST00000367402 TTC37Q6PGP7 1564 aa15.48■□□□□ 0.07
NUP43-202ENST00000367402 PLCH2O75038 1416 aa15.47■□□□□ 0.07
NUP43-202ENST00000367402 TIAM1Q13009 1591 aa15.46■□□□□ 0.07
NUP43-202ENST00000367402 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
NUP43-202ENST00000367402 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
NUP43-202ENST00000367402 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
NUP43-202ENST00000367402 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
NUP43-202ENST00000367402 KDM6BO15054 1643 aa15.44■□□□□ 0.06
NUP43-202ENST00000367402 FANCAO15360 1455 aa15.44■□□□□ 0.06
NUP43-202ENST00000367402 MAP3K1Q13233 1512 aa15.43■□□□□ 0.06
NUP43-202ENST00000367402 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
NUP43-202ENST00000367402 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
NUP43-202ENST00000367402 LRRC9Q6ZRR7 1453 aa15.43■□□□□ 0.06
NUP43-202ENST00000367402 NEO1Q92859 1461 aa15.43■□□□□ 0.06
NUP43-202ENST00000367402 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
NUP43-202ENST00000367402 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
NUP43-202ENST00000367402 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
NUP43-202ENST00000367402 RAPGEF3O95398 923 aa15.4■□□□□ 0.06
NUP43-202ENST00000367402 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
NUP43-202ENST00000367402 CFDP1Q9UEE9 299 aaPredicted RBP15.4■□□□□ 0.06
NUP43-202ENST00000367402 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
NUP43-202ENST00000367402 POTEHQ6S545 545 aa15.39■□□□□ 0.05
NUP43-202ENST00000367402 ARAP3Q8WWN8 1544 aa15.38■□□□□ 0.05
NUP43-202ENST00000367402 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
NUP43-202ENST00000367402 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
NUP43-202ENST00000367402 NCOA2Q15596 1464 aa15.37■□□□□ 0.05
NUP43-202ENST00000367402 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
NUP43-202ENST00000367402 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
NUP43-202ENST00000367402 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
NUP43-202ENST00000367402 DENND4BO75064 1496 aaPredicted RBP15.35■□□□□ 0.05
NUP43-202ENST00000367402 SUPT6HQ7KZ85 1726 aaKnown RBP15.34■□□□□ 0.05
NUP43-202ENST00000367402 PREX2Q70Z35 1606 aa15.33■□□□□ 0.04
NUP43-202ENST00000367402 PPARGC1BQ86YN6 1023 aaKnown RBP15.33■□□□□ 0.04
NUP43-202ENST00000367402 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
NUP43-202ENST00000367402 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
NUP43-202ENST00000367402 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
NUP43-202ENST00000367402 CDC42BPAQ5VT25 1732 aa15.31■□□□□ 0.04
NUP43-202ENST00000367402 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
NUP43-202ENST00000367402 MYT1LQ9UL68 1186 aa15.3■□□□□ 0.04
NUP43-202ENST00000367402 POGZQ7Z3K3 1410 aa15.28■□□□□ 0.04
NUP43-202ENST00000367402 ABCB7O75027 752 aa15.28■□□□□ 0.04
NUP43-202ENST00000367402 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
NUP43-202ENST00000367402 ARHGEF12Q9NZN5 1544 aa15.27■□□□□ 0.03
NUP43-202ENST00000367402 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
NUP43-202ENST00000367402 MYOM3Q5VTT5 1437 aa15.26■□□□□ 0.03
NUP43-202ENST00000367402 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
NUP43-202ENST00000367402 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
NUP43-202ENST00000367402 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
NUP43-202ENST00000367402 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
NUP43-202ENST00000367402 FRMPD1Q5SYB0 1578 aa15.25■□□□□ 0.03
NUP43-202ENST00000367402 SAMD9LQ8IVG5 1584 aa15.25■□□□□ 0.03
NUP43-202ENST00000367402 ABCC1P33527 1531 aa15.25■□□□□ 0.03
NUP43-202ENST00000367402 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
NUP43-202ENST00000367402 SYCP2Q9BX26 1530 aa15.23■□□□□ 0.03
NUP43-202ENST00000367402 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
NUP43-202ENST00000367402 CAMSAP2Q08AD1 1489 aa15.21■□□□□ 0.03
NUP43-202ENST00000367402 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
NUP43-202ENST00000367402 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.03
NUP43-202ENST00000367402 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
NUP43-202ENST00000367402 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
NUP43-202ENST00000367402 ZMYM4Q5VZL5 1548 aa15.2■□□□□ 0.02
NUP43-202ENST00000367402 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
NUP43-202ENST00000367402 ARID4BQ4LE39 1312 aaPredicted RBP15.19■□□□□ 0.02
NUP43-202ENST00000367402 ZFYVE16Q7Z3T8 1539 aa15.19■□□□□ 0.02
NUP43-202ENST00000367402 TSPY4P0CV99 314 aa15.19■□□□□ 0.02
NUP43-202ENST00000367402 TSPY10P0CW01 314 aa15.19■□□□□ 0.02
NUP43-202ENST00000367402 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
NUP43-202ENST00000367402 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
NUP43-202ENST00000367402 KDM5CP41229 1560 aa15.18■□□□□ 0.02
NUP43-202ENST00000367402 MLH3Q9UHC1 1453 aa15.17■□□□□ 0.02
NUP43-202ENST00000367402 ATP10AO60312 1499 aa15.15■□□□□ 0.02
NUP43-202ENST00000367402 CCDC141Q6ZP82 1450 aa15.15■□□□□ 0.02
NUP43-202ENST00000367402 HECW2Q9P2P5 1572 aa15.15■□□□□ 0.02
NUP43-202ENST00000367402 ARHGEF40Q8TER5 1519 aa15.14■□□□□ 0.01
NUP43-202ENST00000367402 PTPN23Q9H3S7 1636 aa15.14■□□□□ 0.01
NUP43-202ENST00000367402 C9orf84Q5VXU9 1444 aa15.12■□□□□ 0.01
NUP43-202ENST00000367402 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
NUP43-202ENST00000367402 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
NUP43-202ENST00000367402 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
NUP43-202ENST00000367402 KDM4FA0A1W2PPD8 638 aa15.11■□□□□ 0.01
NUP43-202ENST00000367402 MLECQ14165 292 aa15.11■□□□□ 0.01
NUP43-202ENST00000367402 ATP7AQ04656 1500 aa15.11■□□□□ 0.01
NUP43-202ENST00000367402 ABCC5O15440 1437 aa15.09■□□□□ 0.01
NUP43-202ENST00000367402 DIP2CQ9Y2E4 1556 aa15.09■□□□□ 0.01
NUP43-202ENST00000367402 KIDINS220Q9ULH0 1771 aa15.08■□□□□ 0.01
NUP43-202ENST00000367402 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
NUP43-202ENST00000367402 DAPK1P53355 1430 aa15.08■□□□□ 0
NUP43-202ENST00000367402 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
NUP43-202ENST00000367402 ABCA6Q8N139 1617 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms