RNA–Protein interactions for RNA: ENST00000367384.6

PCMT1-203, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCMT1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-203ENST00000367384 ARAP3Q8WWN8 1544 aa29.61■■■□□ 2.33
PCMT1-203ENST00000367384 FANCAO15360 1455 aa29.61■■■□□ 2.33
PCMT1-203ENST00000367384 CCNB3Q8WWL7 1395 aa29.6■■■□□ 2.33
PCMT1-203ENST00000367384 PREX2Q70Z35 1606 aa29.6■■■□□ 2.33
PCMT1-203ENST00000367384 NEO1Q92859 1461 aa29.59■■■□□ 2.33
PCMT1-203ENST00000367384 COL17A1Q9UMD9 1497 aaPredicted RBP29.58■■■□□ 2.33
PCMT1-203ENST00000367384 ARHGAP5Q13017 1502 aa29.57■■■□□ 2.32
PCMT1-203ENST00000367384 EFCAB2Q5VUJ9 269 aa29.56■■■□□ 2.32
PCMT1-203ENST00000367384 AKNAQ7Z591 1439 aa29.55■■■□□ 2.32
PCMT1-203ENST00000367384 PHLDB1Q86UU1 1377 aa29.54■■■□□ 2.32
PCMT1-203ENST00000367384 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
PCMT1-203ENST00000367384 KDM6BO15054 1643 aa29.51■■■□□ 2.32
PCMT1-203ENST00000367384 CFAP74Q9C0B2 1584 aa29.51■■■□□ 2.31
PCMT1-203ENST00000367384 CFDP1Q9UEE9 299 aaPredicted RBP29.51■■■□□ 2.31
PCMT1-203ENST00000367384 ITSN2Q9NZM3 1697 aa29.48■■■□□ 2.31
PCMT1-203ENST00000367384 ZNF777Q9ULD5 760 aaPredicted RBP29.46■■■□□ 2.31
PCMT1-203ENST00000367384 ADGRL1O94910 1474 aa29.46■■■□□ 2.31
PCMT1-203ENST00000367384 SAMD9LQ8IVG5 1584 aa29.44■■■□□ 2.3
PCMT1-203ENST00000367384 MYOM3Q5VTT5 1437 aa29.44■■■□□ 2.3
PCMT1-203ENST00000367384 SCAPERQ9BY12 1400 aa29.44■■■□□ 2.3
PCMT1-203ENST00000367384 ZNF644Q9H582 1327 aaPredicted RBP29.43■■■□□ 2.3
PCMT1-203ENST00000367384 RAPGEF3O95398 923 aa29.43■■■□□ 2.3
PCMT1-203ENST00000367384 ARHGEF12Q9NZN5 1544 aa29.41■■■□□ 2.3
PCMT1-203ENST00000367384 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
PCMT1-203ENST00000367384 ABCC1P33527 1531 aa29.39■■■□□ 2.3
PCMT1-203ENST00000367384 FRMPD1Q5SYB0 1578 aa29.37■■■□□ 2.29
PCMT1-203ENST00000367384 MIA2Q96PC5 1412 aa29.36■■■□□ 2.29
PCMT1-203ENST00000367384 RICTORQ6R327 1708 aa29.35■■■□□ 2.29
PCMT1-203ENST00000367384 HNRNPMP52272 730 aaKnown RBP eCLIP29.34■■■□□ 2.29
PCMT1-203ENST00000367384 POGZQ7Z3K3 1410 aa29.33■■■□□ 2.29
PCMT1-203ENST00000367384 KIAA1107Q9UPP5 1409 aa29.33■■■□□ 2.29
PCMT1-203ENST00000367384 TRAPPC8Q9Y2L5 1435 aa29.33■■■□□ 2.29
PCMT1-203ENST00000367384 SYCP2Q9BX26 1530 aa29.33■■■□□ 2.29
PCMT1-203ENST00000367384 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
PCMT1-203ENST00000367384 AFAP1Q8N556 730 aa29.32■■■□□ 2.28
PCMT1-203ENST00000367384 FGD6Q6ZV73 1430 aa29.32■■■□□ 2.28
PCMT1-203ENST00000367384 PLEKHH2Q8IVE3 1493 aa29.31■■■□□ 2.28
PCMT1-203ENST00000367384 MBD5Q9P267 1494 aa29.29■■■□□ 2.28
PCMT1-203ENST00000367384 ZNF518AQ6AHZ1 1483 aa29.27■■■□□ 2.28
PCMT1-203ENST00000367384 RRBP1Q9P2E9 1410 aaKnown RBP29.26■■■□□ 2.28
PCMT1-203ENST00000367384 PTPN23Q9H3S7 1636 aa29.26■■■□□ 2.28
PCMT1-203ENST00000367384 KDM5CP41229 1560 aa29.24■■■□□ 2.27
PCMT1-203ENST00000367384 TCOF1Q13428 1488 aaKnown RBP29.23■■■□□ 2.27
PCMT1-203ENST00000367384 ZMYM4Q5VZL5 1548 aa29.23■■■□□ 2.27
PCMT1-203ENST00000367384 ARHGEF5Q12774 1597 aa29.17■■■□□ 2.26
PCMT1-203ENST00000367384 YEATS2Q9ULM3 1422 aa29.16■■■□□ 2.26
PCMT1-203ENST00000367384 RSPH4AQ5TD94 716 aa29.16■■■□□ 2.26
PCMT1-203ENST00000367384 MAGI2Q86UL8 1455 aa29.15■■■□□ 2.26
PCMT1-203ENST00000367384 MLH3Q9UHC1 1453 aa29.15■■■□□ 2.26
PCMT1-203ENST00000367384 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
PCMT1-203ENST00000367384 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
PCMT1-203ENST00000367384 FAM50AQ14320 339 aaKnown RBP29.13■■■□□ 2.25
PCMT1-203ENST00000367384 SPAG9O60271 1321 aaKnown RBP29.13■■■□□ 2.25
PCMT1-203ENST00000367384 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
PCMT1-203ENST00000367384 ZFYVE16Q7Z3T8 1539 aa29.11■■■□□ 2.25
PCMT1-203ENST00000367384 ABCC5O15440 1437 aa29.1■■■□□ 2.25
PCMT1-203ENST00000367384 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
PCMT1-203ENST00000367384 ARHGEF40Q8TER5 1519 aa29.09■■■□□ 2.25
PCMT1-203ENST00000367384 INO80Q9ULG1 1556 aaPredicted RBP29.07■■■□□ 2.24
PCMT1-203ENST00000367384 DNMT1P26358 1616 aaKnown RBP29.07■■■□□ 2.24
PCMT1-203ENST00000367384 DAPK1P53355 1430 aa29.06■■■□□ 2.24
PCMT1-203ENST00000367384 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
PCMT1-203ENST00000367384 TSPY4P0CV99 314 aa29.06■■■□□ 2.24
PCMT1-203ENST00000367384 TSPY10P0CW01 314 aa29.06■■■□□ 2.24
PCMT1-203ENST00000367384 ABCA6Q8N139 1617 aa29.04■■■□□ 2.24
PCMT1-203ENST00000367384 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
PCMT1-203ENST00000367384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.04■■■□□ 2.24
PCMT1-203ENST00000367384 DIP2CQ9Y2E4 1556 aa29.03■■■□□ 2.24
PCMT1-203ENST00000367384 ATP10AO60312 1499 aa29.02■■■□□ 2.24
PCMT1-203ENST00000367384 CROCC2H7BZ55 1655 aa29.01■■■□□ 2.23
PCMT1-203ENST00000367384 C9orf84Q5VXU9 1444 aa29.01■■■□□ 2.23
PCMT1-203ENST00000367384 MAST1Q9Y2H9 1570 aa29■■■□□ 2.23
PCMT1-203ENST00000367384 SIGLEC1Q9BZZ2 1709 aa28.99■■■□□ 2.23
PCMT1-203ENST00000367384 PTPRKQ15262 1439 aa28.98■■■□□ 2.23
PCMT1-203ENST00000367384 SHANK2Q9UPX8 1470 aa28.98■■■□□ 2.23
PCMT1-203ENST00000367384 CHIC2Q9UKJ5 165 aa28.96■■■□□ 2.23
PCMT1-203ENST00000367384 ITGAEP38570 1179 aa28.92■■■□□ 2.22
PCMT1-203ENST00000367384 REREQ9P2R6 1566 aa28.92■■■□□ 2.22
PCMT1-203ENST00000367384 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
PCMT1-203ENST00000367384 A2MP01023 1474 aa28.89■■■□□ 2.22
PCMT1-203ENST00000367384 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
PCMT1-203ENST00000367384 PLXNC1O60486 1568 aa28.88■■■□□ 2.21
PCMT1-203ENST00000367384 ARID4BQ4LE39 1312 aaPredicted RBP28.87■■■□□ 2.21
PCMT1-203ENST00000367384 NCOA1Q15788 1441 aa28.87■■■□□ 2.21
PCMT1-203ENST00000367384 ADGRL2O95490 1459 aa28.86■■■□□ 2.21
PCMT1-203ENST00000367384 DHX29Q7Z478 1369 aaKnown RBP28.86■■■□□ 2.21
PCMT1-203ENST00000367384 RRP7BPQ9NSQ0 103 aa28.86■■■□□ 2.21
PCMT1-203ENST00000367384 ANKRD30AQ9BXX3 1397 aa28.84■■■□□ 2.21
PCMT1-203ENST00000367384 AGLP35573 1532 aa28.83■■■□□ 2.21
PCMT1-203ENST00000367384 CLSPNQ9HAW4 1339 aa28.83■■■□□ 2.21
PCMT1-203ENST00000367384 KIF15Q9NS87 1388 aa28.83■■■□□ 2.21
PCMT1-203ENST00000367384 ROCK1Q13464 1354 aa28.79■■■□□ 2.2
PCMT1-203ENST00000367384 BCORL1Q5H9F3 1711 aa28.78■■■□□ 2.2
PCMT1-203ENST00000367384 DUOX2Q9NRD8 1548 aa28.78■■■□□ 2.2
PCMT1-203ENST00000367384 MLECQ14165 292 aa28.78■■■□□ 2.2
PCMT1-203ENST00000367384 KDM4FA0A1W2PPD8 638 aa28.77■■■□□ 2.2
PCMT1-203ENST00000367384 KIF3BO15066 747 aa28.73■■■□□ 2.19
PCMT1-203ENST00000367384 ADAMTSL3P82987 1691 aa28.72■■■□□ 2.19
PCMT1-203ENST00000367384 ERBINQ96RT1 1412 aa28.7■■■□□ 2.19
PCMT1-203ENST00000367384 RAB3GAP2Q9H2M9 1393 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms