RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 CFDP1Q9UEE9 299 aaPredicted RBP31.22■■■□□ 2.59
CD55-203ENST00000367063 ARAP3Q8WWN8 1544 aa31.2■■■□□ 2.59
CD55-203ENST00000367063 PPRC1Q5VV67 1664 aaKnown RBP31.2■■■□□ 2.59
CD55-203ENST00000367063 FANCAO15360 1455 aa31.18■■■□□ 2.58
CD55-203ENST00000367063 EFCAB2Q5VUJ9 269 aa31.17■■■□□ 2.58
CD55-203ENST00000367063 TEX14Q8IWB6 1497 aa31.17■■■□□ 2.58
CD55-203ENST00000367063 ZNF777Q9ULD5 760 aaPredicted RBP31.16■■■□□ 2.58
CD55-203ENST00000367063 MIA2Q96PC5 1412 aa31.12■■■□□ 2.57
CD55-203ENST00000367063 CFAP74Q9C0B2 1584 aa31.12■■■□□ 2.57
CD55-203ENST00000367063 FGD6Q6ZV73 1430 aa31.12■■■□□ 2.57
CD55-203ENST00000367063 NEO1Q92859 1461 aa31.1■■■□□ 2.57
CD55-203ENST00000367063 ZNF644Q9H582 1327 aaPredicted RBP31.07■■■□□ 2.56
CD55-203ENST00000367063 AKNAQ7Z591 1439 aa31.07■■■□□ 2.56
CD55-203ENST00000367063 SAMD9LQ8IVG5 1584 aa31.07■■■□□ 2.56
CD55-203ENST00000367063 PTPN23Q9H3S7 1636 aa31.06■■■□□ 2.56
CD55-203ENST00000367063 CAMSAP2Q08AD1 1489 aa31.04■■■□□ 2.56
CD55-203ENST00000367063 ADGRL1O94910 1474 aa31.02■■■□□ 2.56
CD55-203ENST00000367063 ABCC1P33527 1531 aa31■■■□□ 2.55
CD55-203ENST00000367063 PLEKHH2Q8IVE3 1493 aa31■■■□□ 2.55
CD55-203ENST00000367063 FAM50AQ14320 339 aaKnown RBP30.99■■■□□ 2.55
CD55-203ENST00000367063 TCOF1Q13428 1488 aaKnown RBP30.98■■■□□ 2.55
CD55-203ENST00000367063 RRBP1Q9P2E9 1410 aaKnown RBP30.98■■■□□ 2.55
CD55-203ENST00000367063 SCAPERQ9BY12 1400 aa30.98■■■□□ 2.55
CD55-203ENST00000367063 SYCP2Q9BX26 1530 aa30.97■■■□□ 2.55
CD55-203ENST00000367063 HNRNPMP52272 730 aaKnown RBP eCLIP30.96■■■□□ 2.55
CD55-203ENST00000367063 KIAA1107Q9UPP5 1409 aa30.95■■■□□ 2.55
CD55-203ENST00000367063 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
CD55-203ENST00000367063 DENND4BO75064 1496 aaPredicted RBP30.91■■■□□ 2.54
CD55-203ENST00000367063 MBD5Q9P267 1494 aa30.89■■■□□ 2.54
CD55-203ENST00000367063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.88■■■□□ 2.534e-6■■□□□ 11.8
CD55-203ENST00000367063 COL17A1Q9UMD9 1497 aaPredicted RBP30.88■■■□□ 2.53
CD55-203ENST00000367063 RAPGEF3O95398 923 aa30.87■■■□□ 2.53
CD55-203ENST00000367063 TRAPPC8Q9Y2L5 1435 aa30.87■■■□□ 2.53
CD55-203ENST00000367063 POGZQ7Z3K3 1410 aa30.87■■■□□ 2.53
CD55-203ENST00000367063 KDM6BO15054 1643 aa30.87■■■□□ 2.53
CD55-203ENST00000367063 AFAP1Q8N556 730 aa30.85■■■□□ 2.53
CD55-203ENST00000367063 ARHGEF5Q12774 1597 aa30.85■■■□□ 2.53
CD55-203ENST00000367063 RSPH4AQ5TD94 716 aa30.84■■■□□ 2.53
CD55-203ENST00000367063 ZNF518AQ6AHZ1 1483 aa30.84■■■□□ 2.53
CD55-203ENST00000367063 CCDC141Q6ZP82 1450 aa30.83■■■□□ 2.53
CD55-203ENST00000367063 RICTORQ6R327 1708 aa30.83■■■□□ 2.53
CD55-203ENST00000367063 DNMT1P26358 1616 aaKnown RBP30.82■■■□□ 2.52
CD55-203ENST00000367063 FRMPD1Q5SYB0 1578 aa30.8■■■□□ 2.52
CD55-203ENST00000367063 ITGAEP38570 1179 aa30.8■■■□□ 2.52
CD55-203ENST00000367063 DAPK1P53355 1430 aa30.8■■■□□ 2.52
CD55-203ENST00000367063 ABCC5O15440 1437 aa30.79■■■□□ 2.52
CD55-203ENST00000367063 TSPY4P0CV99 314 aa30.78■■■□□ 2.52
CD55-203ENST00000367063 TSPY10P0CW01 314 aa30.78■■■□□ 2.52
CD55-203ENST00000367063 KDM5CP41229 1560 aa30.76■■■□□ 2.51
CD55-203ENST00000367063 CROCC2H7BZ55 1655 aa30.75■■■□□ 2.51
CD55-203ENST00000367063 MYT1LQ9UL68 1186 aa30.74■■■□□ 2.51
CD55-203ENST00000367063 SPAG9O60271 1321 aaKnown RBP30.73■■■□□ 2.51
CD55-203ENST00000367063 C9orf84Q5VXU9 1444 aa30.7■■■□□ 2.51
CD55-203ENST00000367063 ZMYM4Q5VZL5 1548 aa30.7■■■□□ 2.51
CD55-203ENST00000367063 SHANK2Q9UPX8 1470 aa30.69■■■□□ 2.5
CD55-203ENST00000367063 TRIM26Q12899 539 aaPredicted RBP30.69■■■□□ 2.5
CD55-203ENST00000367063 CHIC2Q9UKJ5 165 aa30.69■■■□□ 2.5
CD55-203ENST00000367063 PTPRKQ15262 1439 aa30.69■■■□□ 2.5
CD55-203ENST00000367063 HECW2Q9P2P5 1572 aa30.69■■■□□ 2.5
CD55-203ENST00000367063 MLH3Q9UHC1 1453 aa30.68■■■□□ 2.5
CD55-203ENST00000367063 INO80Q9ULG1 1556 aaPredicted RBP30.66■■■□□ 2.5
CD55-203ENST00000367063 MAST1Q9Y2H9 1570 aa30.66■■■□□ 2.5
CD55-203ENST00000367063 ZFYVE16Q7Z3T8 1539 aa30.66■■■□□ 2.5
CD55-203ENST00000367063 ATP7AQ04656 1500 aa30.66■■■□□ 2.5
CD55-203ENST00000367063 RTEL1-TNFRSF6BF6WH68 1400 aa30.65■■■□□ 2.5
CD55-203ENST00000367063 KIDINS220Q9ULH0 1771 aa30.64■■■□□ 2.5
CD55-203ENST00000367063 MAGI2Q86UL8 1455 aa30.64■■■□□ 2.49
CD55-203ENST00000367063 ADGBQ8N7X0 1667 aa30.6■■■□□ 2.49
CD55-203ENST00000367063 YEATS2Q9ULM3 1422 aa30.59■■■□□ 2.49
CD55-203ENST00000367063 ANKRD30AQ9BXX3 1397 aa30.58■■■□□ 2.49
CD55-203ENST00000367063 ADGRL2O95490 1459 aa30.57■■■□□ 2.48
CD55-203ENST00000367063 ABCA6Q8N139 1617 aa30.56■■■□□ 2.48
CD55-203ENST00000367063 RRP7BPQ9NSQ0 103 aa30.55■■■□□ 2.48
CD55-203ENST00000367063 NCOA1Q15788 1441 aa30.55■■■□□ 2.48
CD55-203ENST00000367063 PLXNC1O60486 1568 aa30.55■■■□□ 2.48
CD55-203ENST00000367063 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
CD55-203ENST00000367063 ARHGEF40Q8TER5 1519 aa30.54■■■□□ 2.48
CD55-203ENST00000367063 DIP2CQ9Y2E4 1556 aa30.54■■■□□ 2.48
CD55-203ENST00000367063 KIF15Q9NS87 1388 aa30.51■■■□□ 2.48
CD55-203ENST00000367063 ATP10AO60312 1499 aa30.49■■■□□ 2.47
CD55-203ENST00000367063 A2MP01023 1474 aa30.46■■■□□ 2.47
CD55-203ENST00000367063 DUOX2Q9NRD8 1548 aa30.45■■■□□ 2.46
CD55-203ENST00000367063 HFM1A2PYH4 1435 aa30.42■■■□□ 2.46
CD55-203ENST00000367063 DHX29Q7Z478 1369 aaKnown RBP30.42■■■□□ 2.46
CD55-203ENST00000367063 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
CD55-203ENST00000367063 NAIPQ13075 1403 aa30.4■■■□□ 2.46
CD55-203ENST00000367063 REREQ9P2R6 1566 aa30.39■■■□□ 2.46
CD55-203ENST00000367063 GCC2Q8IWJ2 1684 aa30.39■■■□□ 2.46
CD55-203ENST00000367063 ANKRD50Q9ULJ7 1429 aa30.38■■■□□ 2.45
CD55-203ENST00000367063 ERBINQ96RT1 1412 aa30.37■■■□□ 2.45
CD55-203ENST00000367063 SIGLEC1Q9BZZ2 1709 aa30.34■■■□□ 2.45
CD55-203ENST00000367063 ARID4BQ4LE39 1312 aaPredicted RBP30.32■■■□□ 2.44
CD55-203ENST00000367063 SETD5Q9C0A6 1442 aa30.31■■■□□ 2.44
CD55-203ENST00000367063 KIF3BO15066 747 aa30.31■■■□□ 2.44
CD55-203ENST00000367063 EIF2AK4Q9P2K8 1649 aaKnown RBP30.3■■■□□ 2.44
CD55-203ENST00000367063 AGLP35573 1532 aa30.3■■■□□ 2.44
CD55-203ENST00000367063 BCORL1Q5H9F3 1711 aa30.25■■■□□ 2.43
CD55-203ENST00000367063 RAB3GAP2Q9H2M9 1393 aa30.24■■■□□ 2.43
CD55-203ENST00000367063 GGT6Q6P531 493 aa30.23■■■□□ 2.43
CD55-203ENST00000367063 MLECQ14165 292 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms