RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 KIF14Q15058 1648 aa19.58■□□□□ 0.72
MRPL55-213ENST00000366740 PLCH2O75038 1416 aa19.56■□□□□ 0.72
MRPL55-213ENST00000366740 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
MRPL55-213ENST00000366740 ARHGEF12Q9NZN5 1544 aa19.55■□□□□ 0.72
MRPL55-213ENST00000366740 KDM5CP41229 1560 aa19.52■□□□□ 0.71
MRPL55-213ENST00000366740 SETD1BQ9UPS6 1966 aaKnown RBP19.52■□□□□ 0.71
MRPL55-213ENST00000366740 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
MRPL55-213ENST00000366740 FMN1Q68DA7 1419 aa19.51■□□□□ 0.71
MRPL55-213ENST00000366740 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
MRPL55-213ENST00000366740 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
MRPL55-213ENST00000366740 C9orf84Q5VXU9 1444 aa19.49■□□□□ 0.71
MRPL55-213ENST00000366740 ATP10AO60312 1499 aa19.48■□□□□ 0.71
MRPL55-213ENST00000366740 REREQ9P2R6 1566 aa19.48■□□□□ 0.71
MRPL55-213ENST00000366740 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
MRPL55-213ENST00000366740 ITSN2Q9NZM3 1697 aa19.47■□□□□ 0.71
MRPL55-213ENST00000366740 DIP2CQ9Y2E4 1556 aa19.46■□□□□ 0.71
MRPL55-213ENST00000366740 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
MRPL55-213ENST00000366740 C3P01024 1663 aa19.46■□□□□ 0.71
MRPL55-213ENST00000366740 CDC42BPAQ5VT25 1732 aa19.45■□□□□ 0.7
MRPL55-213ENST00000366740 ABCA6Q8N139 1617 aa19.45■□□□□ 0.7
MRPL55-213ENST00000366740 HSPA2P54652 639 aa19.44■□□□□ 0.7
MRPL55-213ENST00000366740 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
MRPL55-213ENST00000366740 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
MRPL55-213ENST00000366740 KIDINS220Q9ULH0 1771 aa19.39■□□□□ 0.7
MRPL55-213ENST00000366740 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
MRPL55-213ENST00000366740 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
MRPL55-213ENST00000366740 ABCC1P33527 1531 aa19.39■□□□□ 0.69
MRPL55-213ENST00000366740 MLECQ14165 292 aa19.38■□□□□ 0.69
MRPL55-213ENST00000366740 CLIP1P30622 1438 aa19.37■□□□□ 0.69
MRPL55-213ENST00000366740 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
MRPL55-213ENST00000366740 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
MRPL55-213ENST00000366740 AGLP35573 1532 aa19.35■□□□□ 0.69
MRPL55-213ENST00000366740 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
MRPL55-213ENST00000366740 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
MRPL55-213ENST00000366740 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
MRPL55-213ENST00000366740 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
MRPL55-213ENST00000366740 CERKQ8TCT0 537 aa19.31■□□□□ 0.68
MRPL55-213ENST00000366740 ATP1B4Q9UN42 357 aaPredicted RBP19.31■□□□□ 0.68
MRPL55-213ENST00000366740 UHRF1BP1Q6BDS2 1440 aa19.29■□□□□ 0.68
MRPL55-213ENST00000366740 CASKIN1Q8WXD9 1431 aa19.28■□□□□ 0.68
MRPL55-213ENST00000366740 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
MRPL55-213ENST00000366740 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
MRPL55-213ENST00000366740 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
MRPL55-213ENST00000366740 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
MRPL55-213ENST00000366740 TRAPPC8Q9Y2L5 1435 aa19.26■□□□□ 0.67
MRPL55-213ENST00000366740 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
MRPL55-213ENST00000366740 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
MRPL55-213ENST00000366740 ZNF142P52746 1687 aaPredicted RBP19.23■□□□□ 0.67
MRPL55-213ENST00000366740 INO80Q9ULG1 1556 aaPredicted RBP19.22■□□□□ 0.67
MRPL55-213ENST00000366740 CLTCQ00610 1675 aaKnown RBP19.21■□□□□ 0.67
MRPL55-213ENST00000366740 PTPRTO14522 1441 aa19.21■□□□□ 0.67
MRPL55-213ENST00000366740 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
MRPL55-213ENST00000366740 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
MRPL55-213ENST00000366740 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
MRPL55-213ENST00000366740 CNTLNQ9NXG0 1405 aa19.19■□□□□ 0.66
MRPL55-213ENST00000366740 LTBP4Q8N2S1 1624 aa19.19■□□□□ 0.66
MRPL55-213ENST00000366740 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
MRPL55-213ENST00000366740 MYO3AQ8NEV4 1616 aa19.18■□□□□ 0.66
MRPL55-213ENST00000366740 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
MRPL55-213ENST00000366740 ATP7AQ04656 1500 aa19.16■□□□□ 0.66
MRPL55-213ENST00000366740 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
MRPL55-213ENST00000366740 IQSEC2Q5JU85 1478 aa19.15■□□□□ 0.66
MRPL55-213ENST00000366740 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.65
MRPL55-213ENST00000366740 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
MRPL55-213ENST00000366740 NPATQ14207 1427 aa19.13■□□□□ 0.65
MRPL55-213ENST00000366740 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
MRPL55-213ENST00000366740 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
MRPL55-213ENST00000366740 PLEKHH2Q8IVE3 1493 aa19.09■□□□□ 0.65
MRPL55-213ENST00000366740 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.65
MRPL55-213ENST00000366740 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
MRPL55-213ENST00000366740 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.64
MRPL55-213ENST00000366740 TIAM1Q13009 1591 aa19.07■□□□□ 0.64
MRPL55-213ENST00000366740 A2MP01023 1474 aa19.05■□□□□ 0.64
MRPL55-213ENST00000366740 PLA2R1Q13018 1463 aa19.04■□□□□ 0.64
MRPL55-213ENST00000366740 ZMYM3Q14202 1370 aa19.04■□□□□ 0.64
MRPL55-213ENST00000366740 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
MRPL55-213ENST00000366740 EHBP1L1Q8N3D4 1523 aa19.02■□□□□ 0.64
MRPL55-213ENST00000366740 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
MRPL55-213ENST00000366740 DISP3Q9P2K9 1392 aa19.02■□□□□ 0.64
MRPL55-213ENST00000366740 TCOF1Q13428 1488 aaKnown RBP19.01■□□□□ 0.63
MRPL55-213ENST00000366740 PTPRKQ15262 1439 aa19■□□□□ 0.63
MRPL55-213ENST00000366740 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
MRPL55-213ENST00000366740 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
MRPL55-213ENST00000366740 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
MRPL55-213ENST00000366740 ILDR2Q71H61 639 aa18.97■□□□□ 0.63
MRPL55-213ENST00000366740 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
MRPL55-213ENST00000366740 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
MRPL55-213ENST00000366740 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
MRPL55-213ENST00000366740 MTUS2Q5JR59 1369 aa18.94■□□□□ 0.62
MRPL55-213ENST00000366740 RTEL1-TNFRSF6BF6WH68 1400 aa18.93■□□□□ 0.62
MRPL55-213ENST00000366740 A2ML1A8K2U0 1454 aa18.93■□□□□ 0.62
MRPL55-213ENST00000366740 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
MRPL55-213ENST00000366740 PKD2Q13563 968 aa18.91■□□□□ 0.62
MRPL55-213ENST00000366740 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
MRPL55-213ENST00000366740 NCKAP5LQ9HCH0 1330 aa18.91■□□□□ 0.62
MRPL55-213ENST00000366740 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
MRPL55-213ENST00000366740 SOCS7O14512 581 aa18.9■□□□□ 0.62
MRPL55-213ENST00000366740 ZNF335Q9H4Z2 1342 aaPredicted RBP18.9■□□□□ 0.62
MRPL55-213ENST00000366740 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
MRPL55-213ENST00000366740 GGT6Q6P531 493 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms