RNA–Protein interactions for RNA: ENST00000365645.1

VTRNA1-3-201, vault RNA 1-3, humanhuman

BASIC

Gene VTRNA1-3, Length 89 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA1-3-201ENST00000365645 PPEF1O14829 653 aaPredicted RBP1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 SLC51AQ86UW1 340 aa1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 STAB1Q9NY15 2570 aa1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 YEATS2Q9ULM3 1422 aa1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 EPPK1P58107 5090 aaKnown RBP1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 EIF4G1Q04637 1599 aaKnown RBP1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 ALKQ9UM73 1620 aa1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 NOTCH2Q04721 2471 aa1.55□□□□□ -2.16
VTRNA1-3-201ENST00000365645 SHANK3Q9BYB0 1731 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 CHD4Q14839 1912 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 BOD1L1Q8NFC6 3051 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 TTC28Q96AY4 2481 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 COL9A1P20849 921 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 PRDM6Q9NQX0 595 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 ASPMQ8IZT6 3477 aa1.54□□□□□ -2.16
VTRNA1-3-201ENST00000365645 FBN2P35556 2912 aa1.53□□□□□ -2.16
VTRNA1-3-201ENST00000365645 C5orf42Q9H799 3197 aa1.53□□□□□ -2.16
VTRNA1-3-201ENST00000365645 KRTAP9-6A0A140TA67 174 aa1.53□□□□□ -2.16
VTRNA1-3-201ENST00000365645 HSPA6P17066 643 aa1.53□□□□□ -2.16
VTRNA1-3-201ENST00000365645 CFAP46Q8IYW2 2715 aa1.53□□□□□ -2.16
VTRNA1-3-201ENST00000365645 CFAP54Q96N23 3096 aa1.53□□□□□ -2.17
VTRNA1-3-201ENST00000365645 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
VTRNA1-3-201ENST00000365645 JMYQ8N9B5 988 aa1.52□□□□□ -2.17
VTRNA1-3-201ENST00000365645 ZRANB1Q9UGI0 708 aa1.52□□□□□ -2.17
VTRNA1-3-201ENST00000365645 LAMA3Q16787 3333 aa1.52□□□□□ -2.17
VTRNA1-3-201ENST00000365645 KMT2CQ8NEZ4 4911 aaKnown RBP1.52□□□□□ -2.17
VTRNA1-3-201ENST00000365645 NBEAL2Q6ZNJ1 2754 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 MNX1P50219 401 aaPredicted RBP1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 SLC17A8Q8NDX2 589 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 COL25A1Q9BXS0 654 aaPredicted RBP1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 MYO9AB2RTY4 2548 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 HTTP42858 3142 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 UNC13AQ9UPW8 1703 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 PPRC1Q5VV67 1664 aaKnown RBP1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 CSMD1Q96PZ7 3565 aa1.51□□□□□ -2.17
VTRNA1-3-201ENST00000365645 PTPRMP28827 1452 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 COL17A1Q9UMD9 1497 aaPredicted RBP1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 FBN1P35555 2871 aaKnown RBP1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 AATKQ6ZMQ8 1374 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 ACAP1Q15027 740 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 FAM122AQ96E09 287 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 JMJD1CQ15652 2540 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 TENM4Q6N022 2769 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 NAV3Q8IVL0 2385 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 PRUNE2Q8WUY3 3088 aa1.5□□□□□ -2.17
VTRNA1-3-201ENST00000365645 RSF1Q96T23 1441 aaPredicted RBP1.49□□□□□ -2.17
VTRNA1-3-201ENST00000365645 WDR90Q96KV7 1748 aa1.49□□□□□ -2.17
VTRNA1-3-201ENST00000365645 GIGYF1O75420 1035 aaPredicted RBP1.49□□□□□ -2.17
VTRNA1-3-201ENST00000365645 UBXN11Q5T124 520 aa1.49□□□□□ -2.17
VTRNA1-3-201ENST00000365645 ADAMTSL3P82987 1691 aa1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 SMARCA4P51532 1647 aa1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 FXR1P51114 621 aaKnown RBP eCLIP1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 PRPF38BQ5VTL8 546 aaKnown RBP1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 CLASP1Q7Z460 1538 aa1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 TEX15Q9BXT5 2789 aa1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 SHANK2Q9UPX8 1470 aa1.48□□□□□ -2.17
VTRNA1-3-201ENST00000365645 USP19O94966 1318 aa1.47□□□□□ -2.17
VTRNA1-3-201ENST00000365645 UBR5O95071 2799 aaPredicted RBP1.47□□□□□ -2.17
VTRNA1-3-201ENST00000365645 HSPA2P54652 639 aa1.47□□□□□ -2.17
VTRNA1-3-201ENST00000365645 MAP3K11Q16584 847 aa1.47□□□□□ -2.17
VTRNA1-3-201ENST00000365645 ZNF318Q5VUA4 2279 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 TSPOAP1O95153 1857 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 NANOS1Q8WY41 292 aaKnown RBP1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CARMIL2Q6F5E8 1435 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 RYR2Q92736 4967 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CDH23Q9H251 3354 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 SPG11Q96JI7 2443 aa1.46□□□□□ -2.18
VTRNA1-3-201ENST00000365645 IGSF10Q6WRI0 2623 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CDK12Q9NYV4 1490 aaPredicted RBP1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 XIRP2A4UGR9 3374 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 HABP4Q5JVS0 413 aaKnown RBP1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 ZSWIM6Q9HCJ5 1215 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 VWDEQ8N2E2 1590 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CCDC168Q8NDH2 2452 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 TENM1Q9UKZ4 2725 aa1.45□□□□□ -2.18
VTRNA1-3-201ENST00000365645 TRIOBPQ9H2D6 2365 aa1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 SMG1Q96Q15 3661 aaKnown RBP1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 DIP2BQ9P265 1576 aa1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 HOXB3P14651 431 aaPredicted RBP1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 VASPP50552 380 aaPredicted RBP1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CHADLQ6NUI6 762 aa1.44□□□□□ -2.18
VTRNA1-3-201ENST00000365645 C2CD3Q4AC94 2353 aa1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 NOTCH1P46531 2555 aa1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 HRCP23327 699 aa1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 MAPKBP1O60336 1514 aa1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 CICQ96RK0 1608 aaPredicted RBP1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 SHROOM4Q9ULL8 1493 aa1.43□□□□□ -2.18
VTRNA1-3-201ENST00000365645 PKD1L1Q8TDX9 2849 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 DNAH14Q0VDD8 3507 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 LRRC7Q96NW7 1537 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 UBAP1LF5GYI3 381 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 HNRNPABQ99729 332 aaKnown RBP1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 COL4A3Q01955 1670 aa1.42□□□□□ -2.18
VTRNA1-3-201ENST00000365645 FAM208BQ5VWN6 2430 aa1.41□□□□□ -2.18
VTRNA1-3-201ENST00000365645 NF1P21359 2839 aa1.41□□□□□ -2.18
VTRNA1-3-201ENST00000365645 ZDBF2Q9HCK1 2354 aa1.41□□□□□ -2.18
VTRNA1-3-201ENST00000365645 ABHD8Q96I13 439 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms