RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 KCTD12Q96CX2 325 aaKnown RBP3.47□□□□□ -1.85
RNU6-340P-201ENST00000364005 KRTAP9-2Q9BYQ4 174 aa3.47□□□□□ -1.85
RNU6-340P-201ENST00000364005 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
RNU6-340P-201ENST00000364005 ADGRD1Q6QNK2 874 aa3.46□□□□□ -1.86
RNU6-340P-201ENST00000364005 ZNF787Q6DD87 383 aa3.45□□□□□ -1.86
RNU6-340P-201ENST00000364005 KHSRPQ92945 711 aaKnown RBP eCLIP3.45□□□□□ -1.86
RNU6-340P-201ENST00000364005 PTPN5P54829 565 aa3.43□□□□□ -1.86
RNU6-340P-201ENST00000364005 LAPTM4AQ15012 233 aa3.43□□□□□ -1.86
RNU6-340P-201ENST00000364005 PLCD3Q8N3E9 789 aa3.43□□□□□ -1.86
RNU6-340P-201ENST00000364005 TMEM92Q6UXU6 159 aa3.42□□□□□ -1.86
RNU6-340P-201ENST00000364005 PROM2Q8N271 834 aa3.42□□□□□ -1.86
RNU6-340P-201ENST00000364005 HRO43593 1189 aa3.41□□□□□ -1.86
RNU6-340P-201ENST00000364005 XP32Q5T750 250 aa3.41□□□□□ -1.86
RNU6-340P-201ENST00000364005 ZBTB47Q9UFB7 747 aaPredicted RBP3.41□□□□□ -1.86
RNU6-340P-201ENST00000364005 GFRA3O60609 400 aa3.4□□□□□ -1.87
RNU6-340P-201ENST00000364005 TK2O00142 265 aa3.39□□□□□ -1.87
RNU6-340P-201ENST00000364005 ARHGAP33O14559 1287 aa3.39□□□□□ -1.87
RNU6-340P-201ENST00000364005 PSEN1P49768 467 aa3.39□□□□□ -1.87
RNU6-340P-201ENST00000364005 ZNF467Q7Z7K2 595 aaPredicted RBP3.39□□□□□ -1.87
RNU6-340P-201ENST00000364005 STAC3Q96MF2 364 aa3.39□□□□□ -1.87
RNU6-340P-201ENST00000364005 NUDT7P0C024 238 aa3.37□□□□□ -1.87
RNU6-340P-201ENST00000364005 LHX6Q9UPM6 363 aa3.37□□□□□ -1.87
RNU6-340P-201ENST00000364005 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
RNU6-340P-201ENST00000364005 DMRTA1Q5VZB9 504 aa3.36□□□□□ -1.87
RNU6-340P-201ENST00000364005 CABP2Q9NPB3 220 aa3.36□□□□□ -1.87
RNU6-340P-201ENST00000364005 MICALL2Q8IY33 904 aa3.35□□□□□ -1.87
RNU6-340P-201ENST00000364005 PSEN2P49810 448 aa3.34□□□□□ -1.87
RNU6-340P-201ENST00000364005 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
RNU6-340P-201ENST00000364005 THSD4Q6ZMP0 1018 aa3.33□□□□□ -1.88
RNU6-340P-201ENST00000364005 EHMT2Q96KQ7 1210 aa3.33□□□□□ -1.88
RNU6-340P-201ENST00000364005 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
RNU6-340P-201ENST00000364005 BTBD11A6QL63 1104 aa3.32□□□□□ -1.88
RNU6-340P-201ENST00000364005 NRG2O14511 850 aaPredicted RBP3.32□□□□□ -1.88
RNU6-340P-201ENST00000364005 PSMG3-AS1Q96PY0 264 aa3.32□□□□□ -1.88
RNU6-340P-201ENST00000364005 PDAP1Q13442 181 aaKnown RBP3.31□□□□□ -1.88
RNU6-340P-201ENST00000364005 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
RNU6-340P-201ENST00000364005 TREML4Q6UXN2 200 aa3.3□□□□□ -1.88
RNU6-340P-201ENST00000364005 STK17AQ9UEE5 414 aa3.3□□□□□ -1.88
RNU6-340P-201ENST00000364005 ITGBL1O95965 494 aaPredicted RBP3.29□□□□□ -1.88
RNU6-340P-201ENST00000364005 LCE2AQ5TA79 106 aaPredicted RBP3.29□□□□□ -1.88
RNU6-340P-201ENST00000364005 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
RNU6-340P-201ENST00000364005 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
RNU6-340P-201ENST00000364005 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
RNU6-340P-201ENST00000364005 PSDA5PKW4 1024 aaPredicted RBP3.28□□□□□ -1.88
RNU6-340P-201ENST00000364005 CHRM1P11229 460 aaPredicted RBP3.28□□□□□ -1.88
RNU6-340P-201ENST00000364005 PCDHGA4Q9Y5G9 962 aa3.28□□□□□ -1.88
RNU6-340P-201ENST00000364005 WNT2BQ93097 391 aa3.27□□□□□ -1.89
RNU6-340P-201ENST00000364005 VPS9D1Q9Y2B5 631 aa3.27□□□□□ -1.89
RNU6-340P-201ENST00000364005 GOLGA8CPA6NN73 597 aa3.26□□□□□ -1.89
RNU6-340P-201ENST00000364005 POTECB2RU33 542 aa3.26□□□□□ -1.89
RNU6-340P-201ENST00000364005 EFCAB3Q8N7B9 438 aa3.26□□□□□ -1.89
RNU6-340P-201ENST00000364005 GSE1Q14687 1217 aa3.25□□□□□ -1.89
RNU6-340P-201ENST00000364005 KCNK17Q96T54 332 aa3.24□□□□□ -1.89
RNU6-340P-201ENST00000364005 PRKD2Q9BZL6 878 aa3.24□□□□□ -1.89
RNU6-340P-201ENST00000364005 ANO8Q9HCE9 1232 aaPredicted RBP3.24□□□□□ -1.89
RNU6-340P-201ENST00000364005 BHMG1C9JSJ3 638 aaPredicted RBP3.23□□□□□ -1.89
RNU6-340P-201ENST00000364005 SLC34A2O95436 690 aa3.23□□□□□ -1.89
RNU6-340P-201ENST00000364005 KCNC4Q03721 635 aa3.23□□□□□ -1.89
RNU6-340P-201ENST00000364005 PDZRN3Q9UPQ7 1066 aa3.23□□□□□ -1.89
RNU6-340P-201ENST00000364005 MS4A4AQ96JQ5 239 aa3.22□□□□□ -1.89
RNU6-340P-201ENST00000364005 KCNH8Q96L42 1107 aa3.22□□□□□ -1.89
RNU6-340P-201ENST00000364005 KDM4FA0A1W2PPD8 638 aa3.21□□□□□ -1.9
RNU6-340P-201ENST00000364005 INSM1Q01101 510 aaPredicted RBP3.21□□□□□ -1.9
RNU6-340P-201ENST00000364005 PPP4R3BQ5MIZ7 849 aa3.21□□□□□ -1.9
RNU6-340P-201ENST00000364005 MRPL50Q8N5N7 158 aaKnown RBP3.21□□□□□ -1.9
RNU6-340P-201ENST00000364005 C2orf72A6NCS6 295 aa3.2□□□□□ -1.9
RNU6-340P-201ENST00000364005 KIF3CO14782 793 aa3.2□□□□□ -1.9
RNU6-340P-201ENST00000364005 WFS1O76024 890 aa3.19□□□□□ -1.9
RNU6-340P-201ENST00000364005 SLC4A5Q9BY07 1137 aa3.19□□□□□ -1.9
RNU6-340P-201ENST00000364005 WIPF1O43516 503 aa3.18□□□□□ -1.9
RNU6-340P-201ENST00000364005 MYT1Q01538 1121 aa3.18□□□□□ -1.9
RNU6-340P-201ENST00000364005 V9GY48 417 aaPredicted RBP3.18□□□□□ -1.9
RNU6-340P-201ENST00000364005 SOX12O15370 315 aa3.17□□□□□ -1.9
RNU6-340P-201ENST00000364005 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
RNU6-340P-201ENST00000364005 PHF8Q9UPP1 1060 aa3.16□□□□□ -1.9
RNU6-340P-201ENST00000364005 BCAMP50895 628 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 PKDCCQ504Y2 493 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 NYAP1Q6ZVC0 841 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 ANKK1Q8NFD2 765 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 ZBED2Q9BTP6 218 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 NBPF3Q9H094 633 aa3.15□□□□□ -1.91
RNU6-340P-201ENST00000364005 CSRNP3Q8WYN3 585 aa3.14□□□□□ -1.91
RNU6-340P-201ENST00000364005 WBP1LQ9NX94 342 aa3.14□□□□□ -1.91
RNU6-340P-201ENST00000364005 SOWAHBA6NEL2 793 aa3.13□□□□□ -1.91
RNU6-340P-201ENST00000364005 DGAT1O75907 488 aa3.13□□□□□ -1.91
RNU6-340P-201ENST00000364005 NFX1Q12986 1120 aaKnown RBP3.13□□□□□ -1.91
RNU6-340P-201ENST00000364005 PPP1R18Q6NYC8 613 aa3.13□□□□□ -1.91
RNU6-340P-201ENST00000364005 FAM181BA6NEQ2 426 aa3.12□□□□□ -1.91
RNU6-340P-201ENST00000364005 KLHL34Q8N239 644 aa3.12□□□□□ -1.91
RNU6-340P-201ENST00000364005 PTCD2Q8WV60 388 aaKnown RBP3.12□□□□□ -1.91
RNU6-340P-201ENST00000364005 BCL2L12Q9HB09 334 aa3.12□□□□□ -1.91
RNU6-340P-201ENST00000364005 TMC2Q8TDI7 906 aa3.11□□□□□ -1.91
RNU6-340P-201ENST00000364005 PTPREP23469 700 aa3.1□□□□□ -1.91
RNU6-340P-201ENST00000364005 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
RNU6-340P-201ENST00000364005 TRIM67Q6ZTA4 783 aa3.1□□□□□ -1.91
RNU6-340P-201ENST00000364005 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
RNU6-340P-201ENST00000364005 ST8SIA5O15466 376 aa3.09□□□□□ -1.91
RNU6-340P-201ENST00000364005 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
RNU6-340P-201ENST00000364005 ZNF454Q8N9F8 522 aa3.09□□□□□ -1.91
RNU6-340P-201ENST00000364005 NLRP6P59044 892 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms