RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 C2orf72A6NCS6 295 aa5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 MAMSTRQ6ZN01 415 aa5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 C3orf67Q6ZVT6 689 aa5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 SLAIN1Q8ND83 568 aa5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.27□□□□□ -1.57
RNU6-271P-201ENST00000363858 HOXB3P14651 431 aaPredicted RBP5.25□□□□□ -1.57
RNU6-271P-201ENST00000363858 DSG2Q14126 1118 aa5.24□□□□□ -1.57
RNU6-271P-201ENST00000363858 MFSD10Q14728 455 aa5.24□□□□□ -1.57
RNU6-271P-201ENST00000363858 GPHNQ9NQX3 736 aaPredicted RBP5.24□□□□□ -1.57
RNU6-271P-201ENST00000363858 G3V3G9 751 aa5.23□□□□□ -1.57
RNU6-271P-201ENST00000363858 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
RNU6-271P-201ENST00000363858 FOXK1P85037 733 aa5.21□□□□□ -1.58
RNU6-271P-201ENST00000363858 TMC2Q8TDI7 906 aa5.2□□□□□ -1.58
RNU6-271P-201ENST00000363858 LARP6Q9BRS8 491 aaKnown RBP5.2□□□□□ -1.58
RNU6-271P-201ENST00000363858 HAP1P54257 671 aaPredicted RBP5.19□□□□□ -1.58
RNU6-271P-201ENST00000363858 PPP1R15BQ5SWA1 713 aa5.19□□□□□ -1.58
RNU6-271P-201ENST00000363858 PLPP6Q8IY26 295 aa5.19□□□□□ -1.58
RNU6-271P-201ENST00000363858 EMILIN3Q9NT22 766 aa5.19□□□□□ -1.58
RNU6-271P-201ENST00000363858 PDE4AP27815 886 aa5.18□□□□□ -1.58
RNU6-271P-201ENST00000363858 CAMK2BQ13554 666 aa5.18□□□□□ -1.58
RNU6-271P-201ENST00000363858 KHSRPQ92945 711 aaKnown RBP eCLIP5.18□□□□□ -1.58
RNU6-271P-201ENST00000363858 DDX27Q96GQ7 796 aaKnown RBP5.18□□□□□ -1.58
RNU6-271P-201ENST00000363858 KDM4FA0A1W2PPD8 638 aa5.17□□□□□ -1.58
RNU6-271P-201ENST00000363858 ST18O60284 1047 aa5.17□□□□□ -1.58
RNU6-271P-201ENST00000363858 SLC34A2O95436 690 aa5.16□□□□□ -1.58
RNU6-271P-201ENST00000363858 GPR153Q6NV75 609 aa5.16□□□□□ -1.58
RNU6-271P-201ENST00000363858 OXER1Q8TDS5 423 aa5.15□□□□□ -1.59
RNU6-271P-201ENST00000363858 PTCD2Q8WV60 388 aaKnown RBP5.15□□□□□ -1.59
RNU6-271P-201ENST00000363858 POTEB3A0JP26 581 aa5.14□□□□□ -1.59
RNU6-271P-201ENST00000363858 POTEBQ6S5H4 581 aa5.14□□□□□ -1.59
RNU6-271P-201ENST00000363858 FAM163AQ96GL9 167 aaPredicted RBP5.14□□□□□ -1.59
RNU6-271P-201ENST00000363858 PCDHGA4Q9Y5G9 962 aa5.14□□□□□ -1.59
RNU6-271P-201ENST00000363858 HOXB1P14653 301 aaPredicted RBP5.13□□□□□ -1.59
RNU6-271P-201ENST00000363858 DOK7Q18PE1 504 aa5.13□□□□□ -1.59
RNU6-271P-201ENST00000363858 ARSIQ5FYB1 569 aa5.13□□□□□ -1.59
RNU6-271P-201ENST00000363858 KCNV2Q8TDN2 545 aa5.13□□□□□ -1.59
RNU6-271P-201ENST00000363858 UPF1Q92900 1129 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU6-271P-201ENST00000363858 MARVELD3Q96A59 401 aa5.12□□□□□ -1.59
RNU6-271P-201ENST00000363858 SNPHO15079 494 aa5.11□□□□□ -1.59
RNU6-271P-201ENST00000363858 NUDT7P0C024 238 aa5.11□□□□□ -1.59
RNU6-271P-201ENST00000363858 ZSWIM6Q9HCJ5 1215 aa5.11□□□□□ -1.59
RNU6-271P-201ENST00000363858 DPYSL4O14531 572 aa5.1□□□□□ -1.59
RNU6-271P-201ENST00000363858 E2F4Q16254 413 aa5.1□□□□□ -1.59
RNU6-271P-201ENST00000363858 VSIG10Q8N0Z9 540 aa5.1□□□□□ -1.59
RNU6-271P-201ENST00000363858 ARIH1Q9Y4X5 557 aaPredicted RBP5.1□□□□□ -1.59
RNU6-271P-201ENST00000363858 ZNF710Q8N1W2 664 aa5.08□□□□□ -1.6
RNU6-271P-201ENST00000363858 LHX6Q9UPM6 363 aa5.08□□□□□ -1.6
RNU6-271P-201ENST00000363858 PRIM1P49642 420 aaKnown RBP5.07□□□□□ -1.6
RNU6-271P-201ENST00000363858 PDIA6Q15084 440 aa5.07□□□□□ -1.6
RNU6-271P-201ENST00000363858 POTEGQ6S5H5 508 aa5.07□□□□□ -1.6
RNU6-271P-201ENST00000363858 ANO8Q9HCE9 1232 aaPredicted RBP5.07□□□□□ -1.6
RNU6-271P-201ENST00000363858 ZNF316A6NFI3 1004 aaPredicted RBP5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 POTEMA6NI47 508 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 EVI5O60447 810 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 SLC24A1O60721 1099 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 EMP3P54852 163 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 POTEEQ6S8J3 1075 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 WDR70Q9NW82 654 aa5.06□□□□□ -1.6
RNU6-271P-201ENST00000363858 RIMBP2O15034 1052 aa5.05□□□□□ -1.6
RNU6-271P-201ENST00000363858 HS3ST6Q96QI5 342 aa5.05□□□□□ -1.6
RNU6-271P-201ENST00000363858 FAM205CA6NFA0 338 aa5.04□□□□□ -1.6
RNU6-271P-201ENST00000363858 MAP3K9P80192 1104 aa5.04□□□□□ -1.6
RNU6-271P-201ENST00000363858 ARHGEF1Q92888 912 aaKnown RBP5.04□□□□□ -1.6
RNU6-271P-201ENST00000363858 MLLT3P42568 568 aaPredicted RBP5.03□□□□□ -1.6
RNU6-271P-201ENST00000363858 VARS2Q5ST30 1063 aaKnown RBP5.03□□□□□ -1.6
RNU6-271P-201ENST00000363858 TBC1D12O60347 775 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 PTGER2P43116 358 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 FOSBP53539 338 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 KRTAP3-2Q9BYR7 98 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 PCDHGA10Q9Y5H3 936 aa5.02□□□□□ -1.61
RNU6-271P-201ENST00000363858 ERBB3P21860 1342 aa5.01□□□□□ -1.61
RNU6-271P-201ENST00000363858 SEMA3EO15041 775 aa5.01□□□□□ -1.61
RNU6-271P-201ENST00000363858 SPDYE16A6NNV3 312 aaPredicted RBP5□□□□□ -1.61
RNU6-271P-201ENST00000363858 P3H3Q8IVL6 736 aa5□□□□□ -1.61
RNU6-271P-201ENST00000363858 DDX12PQ92771 950 aa5□□□□□ -1.61
RNU6-271P-201ENST00000363858 JPH4Q96JJ6 628 aa5□□□□□ -1.61
RNU6-271P-201ENST00000363858 ADAM33Q9BZ11 813 aa5□□□□□ -1.61
RNU6-271P-201ENST00000363858 TESPA1A2RU30 521 aaPredicted RBP4.99□□□□□ -1.61
RNU6-271P-201ENST00000363858 OSBPP22059 807 aa4.99□□□□□ -1.61
RNU6-271P-201ENST00000363858 ZNF687Q8N1G0 1237 aa4.99□□□□□ -1.61
RNU6-271P-201ENST00000363858 ZNF454Q8N9F8 522 aa4.99□□□□□ -1.61
RNU6-271P-201ENST00000363858 PHF14O94880 888 aa4.98□□□□□ -1.61
RNU6-271P-201ENST00000363858 CDAN1Q8IWY9 1227 aa4.98□□□□□ -1.61
RNU6-271P-201ENST00000363858 AXIN2Q9Y2T1 843 aa4.98□□□□□ -1.61
RNU6-271P-201ENST00000363858 DMRTA1Q5VZB9 504 aa4.97□□□□□ -1.61
RNU6-271P-201ENST00000363858 CDHR5Q9HBB8 845 aa4.97□□□□□ -1.61
RNU6-271P-201ENST00000363858 GRXCR2A6NFK2 248 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 COL9A1P20849 921 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 PSEN2P49810 448 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 EN1Q05925 392 aaPredicted RBP4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 NBR1Q14596 966 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 TSR1Q2NL82 804 aaKnown RBP4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 TYW1BQ6NUM6 668 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 ZDHHC16Q969W1 377 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 BCL2L12Q9HB09 334 aa4.96□□□□□ -1.62
RNU6-271P-201ENST00000363858 PPP4R3BQ5MIZ7 849 aa4.95□□□□□ -1.62
RNU6-271P-201ENST00000363858 RBM33Q96EV2 1170 aaKnown RBP4.95□□□□□ -1.62
RNU6-271P-201ENST00000363858 PSDA5PKW4 1024 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms