RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
COL6A1-201ENST00000361866 ANP32BQ92688 251 aaKnown RBP18.09■□□□□ 0.49
COL6A1-201ENST00000361866 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
COL6A1-201ENST00000361866 PDE4AP27815 886 aa18.07■□□□□ 0.48
COL6A1-201ENST00000361866 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
COL6A1-201ENST00000361866 NUP155O75694 1391 aa18.06■□□□□ 0.48
COL6A1-201ENST00000361866 LRRC9Q6ZRR7 1453 aa18.05■□□□□ 0.48
COL6A1-201ENST00000361866 KIF7Q2M1P5 1343 aa18.05■□□□□ 0.48
COL6A1-201ENST00000361866 TMF1P82094 1093 aa18.04■□□□□ 0.48
COL6A1-201ENST00000361866 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
COL6A1-201ENST00000361866 RALBP1Q15311 655 aa18.02■□□□□ 0.48
COL6A1-201ENST00000361866 CCDC7Q96M83 1385 aa18.02■□□□□ 0.47
COL6A1-201ENST00000361866 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
COL6A1-201ENST00000361866 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
COL6A1-201ENST00000361866 FGD6Q6ZV73 1430 aa18■□□□□ 0.47
COL6A1-201ENST00000361866 ZNF644Q9H582 1327 aaPredicted RBP18■□□□□ 0.47
COL6A1-201ENST00000361866 RRP1P56182 461 aaKnown RBP18■□□□□ 0.47
COL6A1-201ENST00000361866 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
COL6A1-201ENST00000361866 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
COL6A1-201ENST00000361866 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
COL6A1-201ENST00000361866 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
COL6A1-201ENST00000361866 UACAQ9BZF9 1416 aa17.98■□□□□ 0.47
COL6A1-201ENST00000361866 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
COL6A1-201ENST00000361866 TRIM44Q96DX7 344 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-201ENST00000361866 GZF1Q9H116 711 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-201ENST00000361866 USP47Q96K76 1375 aa17.96■□□□□ 0.47
COL6A1-201ENST00000361866 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
COL6A1-201ENST00000361866 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
COL6A1-201ENST00000361866 AKNAQ7Z591 1439 aa17.95■□□□□ 0.46
COL6A1-201ENST00000361866 NBPF8Q3BBV2 869 aa17.95■□□□□ 0.46
COL6A1-201ENST00000361866 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
COL6A1-201ENST00000361866 CNTLNQ9NXG0 1405 aa17.93■□□□□ 0.46
COL6A1-201ENST00000361866 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL6A1-201ENST00000361866 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
COL6A1-201ENST00000361866 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
COL6A1-201ENST00000361866 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
COL6A1-201ENST00000361866 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
COL6A1-201ENST00000361866 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
COL6A1-201ENST00000361866 C11orf95C9JLR9 678 aaPredicted RBP17.91■□□□□ 0.46
COL6A1-201ENST00000361866 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
COL6A1-201ENST00000361866 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
COL6A1-201ENST00000361866 CDCA7LQ96GN5 454 aa17.91■□□□□ 0.46
COL6A1-201ENST00000361866 PANK3Q9H999 370 aa17.91■□□□□ 0.46
COL6A1-201ENST00000361866 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
COL6A1-201ENST00000361866 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
COL6A1-201ENST00000361866 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.46
COL6A1-201ENST00000361866 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
COL6A1-201ENST00000361866 GOLGA2Q08379 1002 aa17.89■□□□□ 0.45
COL6A1-201ENST00000361866 IL27Q8NEV9 243 aa17.89■□□□□ 0.45
COL6A1-201ENST00000361866 KIF15Q9NS87 1388 aa17.89■□□□□ 0.45
COL6A1-201ENST00000361866 PDE3BQ13370 1112 aa17.89■□□□□ 0.45
COL6A1-201ENST00000361866 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
COL6A1-201ENST00000361866 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
COL6A1-201ENST00000361866 ANKRD30AQ9BXX3 1397 aa17.87■□□□□ 0.45
COL6A1-201ENST00000361866 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
COL6A1-201ENST00000361866 MYOM3Q5VTT5 1437 aa17.86■□□□□ 0.45
COL6A1-201ENST00000361866 GSE1Q14687 1217 aa17.85■□□□□ 0.45
COL6A1-201ENST00000361866 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL6A1-201ENST00000361866 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
COL6A1-201ENST00000361866 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.45
COL6A1-201ENST00000361866 USP35Q9P2H5 1018 aa17.83■□□□□ 0.45
COL6A1-201ENST00000361866 BCL2L13Q9BXK5 485 aa17.83■□□□□ 0.44
COL6A1-201ENST00000361866 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
COL6A1-201ENST00000361866 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
COL6A1-201ENST00000361866 RRP7AQ9Y3A4 280 aaKnown RBP17.81■□□□□ 0.44
COL6A1-201ENST00000361866 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
COL6A1-201ENST00000361866 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
COL6A1-201ENST00000361866 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
COL6A1-201ENST00000361866 CFTRP13569 1480 aa17.8■□□□□ 0.44
COL6A1-201ENST00000361866 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
COL6A1-201ENST00000361866 FAM161AQ3B820 660 aa17.79■□□□□ 0.44
COL6A1-201ENST00000361866 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
COL6A1-201ENST00000361866 APAF1O14727 1248 aa17.77■□□□□ 0.44
COL6A1-201ENST00000361866 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
COL6A1-201ENST00000361866 CASKIN1Q8WXD9 1431 aa17.77■□□□□ 0.44
COL6A1-201ENST00000361866 NFKBIBQ15653 356 aa17.77■□□□□ 0.43
COL6A1-201ENST00000361866 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.43
COL6A1-201ENST00000361866 COG6Q9Y2V7 657 aa17.77■□□□□ 0.43
COL6A1-201ENST00000361866 TIAM1Q13009 1591 aa17.77■□□□□ 0.43
COL6A1-201ENST00000361866 CENPQQ7L2Z9 268 aaPredicted RBP17.76■□□□□ 0.43
COL6A1-201ENST00000361866 CUX1P39880 1505 aa17.76■□□□□ 0.43
COL6A1-201ENST00000361866 MS4A1P11836 297 aa17.76■□□□□ 0.43
COL6A1-201ENST00000361866 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
COL6A1-201ENST00000361866 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
COL6A1-201ENST00000361866 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-201ENST00000361866 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL6A1-201ENST00000361866 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
COL6A1-201ENST00000361866 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
COL6A1-201ENST00000361866 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
COL6A1-201ENST00000361866 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-201ENST00000361866 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.43
COL6A1-201ENST00000361866 NAIPQ13075 1403 aa17.71■□□□□ 0.43
COL6A1-201ENST00000361866 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
COL6A1-201ENST00000361866 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
COL6A1-201ENST00000361866 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
COL6A1-201ENST00000361866 ADAMTS8Q9UP79 889 aa17.71■□□□□ 0.43
COL6A1-201ENST00000361866 APBB1O00213 710 aa17.69■□□□□ 0.42
COL6A1-201ENST00000361866 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
COL6A1-201ENST00000361866 RWDD1Q9H446 243 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-201ENST00000361866 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms