RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 ARHGAP5Q13017 1502 aa23.55■■□□□ 1.36
TPM2-202ENST00000360958 GPATCH8Q9UKJ3 1502 aaKnown RBP23.55■■□□□ 1.36
TPM2-202ENST00000360958 SUPT6HQ7KZ85 1726 aaKnown RBP23.53■■□□□ 1.36
TPM2-202ENST00000360958 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
TPM2-202ENST00000360958 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
TPM2-202ENST00000360958 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
TPM2-202ENST00000360958 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
TPM2-202ENST00000360958 RICTORQ6R327 1708 aa23.5■■□□□ 1.35
TPM2-202ENST00000360958 NCOA2Q15596 1464 aa23.49■■□□□ 1.35
TPM2-202ENST00000360958 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
TPM2-202ENST00000360958 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
TPM2-202ENST00000360958 APLP2Q06481 763 aa23.47■■□□□ 1.35
TPM2-202ENST00000360958 POGZQ7Z3K3 1410 aa23.47■■□□□ 1.35
TPM2-202ENST00000360958 SCAPERQ9BY12 1400 aa23.47■■□□□ 1.35
TPM2-202ENST00000360958 ABCC1P33527 1531 aa23.46■■□□□ 1.35
TPM2-202ENST00000360958 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
TPM2-202ENST00000360958 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
TPM2-202ENST00000360958 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
TPM2-202ENST00000360958 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
TPM2-202ENST00000360958 PLEKHH2Q8IVE3 1493 aa23.43■■□□□ 1.34
TPM2-202ENST00000360958 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
TPM2-202ENST00000360958 CFDP1Q9UEE9 299 aaPredicted RBP23.42■■□□□ 1.34
TPM2-202ENST00000360958 SAMD9LQ8IVG5 1584 aa23.42■■□□□ 1.34
TPM2-202ENST00000360958 KDM5CP41229 1560 aa23.41■■□□□ 1.34
TPM2-202ENST00000360958 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
TPM2-202ENST00000360958 ARHGEF40Q8TER5 1519 aa23.37■■□□□ 1.33
TPM2-202ENST00000360958 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
TPM2-202ENST00000360958 MYOM3Q5VTT5 1437 aa23.34■■□□□ 1.33
TPM2-202ENST00000360958 SYCP2Q9BX26 1530 aa23.33■■□□□ 1.33
TPM2-202ENST00000360958 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
TPM2-202ENST00000360958 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
TPM2-202ENST00000360958 ZFYVE16Q7Z3T8 1539 aa23.32■■□□□ 1.32
TPM2-202ENST00000360958 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
TPM2-202ENST00000360958 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
TPM2-202ENST00000360958 AFAP1Q8N556 730 aa23.29■■□□□ 1.32
TPM2-202ENST00000360958 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
TPM2-202ENST00000360958 CAMSAP2Q08AD1 1489 aa23.29■■□□□ 1.32
TPM2-202ENST00000360958 YEATS2Q9ULM3 1422 aa23.26■■□□□ 1.31
TPM2-202ENST00000360958 RSPH4AQ5TD94 716 aa23.26■■□□□ 1.31
TPM2-202ENST00000360958 ZNF644Q9H582 1327 aaPredicted RBP23.26■■□□□ 1.31
TPM2-202ENST00000360958 ARHGEF5Q12774 1597 aa23.25■■□□□ 1.31
TPM2-202ENST00000360958 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
TPM2-202ENST00000360958 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.31
TPM2-202ENST00000360958 ATP10AO60312 1499 aa23.24■■□□□ 1.31
TPM2-202ENST00000360958 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
TPM2-202ENST00000360958 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
TPM2-202ENST00000360958 RTEL1-TNFRSF6BF6WH68 1400 aa23.21■■□□□ 1.31
TPM2-202ENST00000360958 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
TPM2-202ENST00000360958 CCDC141Q6ZP82 1450 aa23.21■■□□□ 1.31
TPM2-202ENST00000360958 DIP2CQ9Y2E4 1556 aa23.2■■□□□ 1.3
TPM2-202ENST00000360958 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
TPM2-202ENST00000360958 C9orf84Q5VXU9 1444 aa23.2■■□□□ 1.3
TPM2-202ENST00000360958 SPAG9O60271 1321 aaKnown RBP23.19■■□□□ 1.3
TPM2-202ENST00000360958 ABCA6Q8N139 1617 aa23.19■■□□□ 1.3
TPM2-202ENST00000360958 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
TPM2-202ENST00000360958 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
TPM2-202ENST00000360958 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
TPM2-202ENST00000360958 AGLP35573 1532 aa23.14■■□□□ 1.3
TPM2-202ENST00000360958 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
TPM2-202ENST00000360958 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
TPM2-202ENST00000360958 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
TPM2-202ENST00000360958 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
TPM2-202ENST00000360958 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
TPM2-202ENST00000360958 PLXNC1O60486 1568 aa23.09■■□□□ 1.29
TPM2-202ENST00000360958 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.29
TPM2-202ENST00000360958 ADGBQ8N7X0 1667 aa23.08■■□□□ 1.29
TPM2-202ENST00000360958 DNMT1P26358 1616 aaKnown RBP23.08■■□□□ 1.28
TPM2-202ENST00000360958 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
TPM2-202ENST00000360958 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
TPM2-202ENST00000360958 ARID4BQ4LE39 1312 aaPredicted RBP23.06■■□□□ 1.28
TPM2-202ENST00000360958 A2MP01023 1474 aa23.05■■□□□ 1.28
TPM2-202ENST00000360958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.28
TPM2-202ENST00000360958 CROCC2H7BZ55 1655 aa23.05■■□□□ 1.28
TPM2-202ENST00000360958 ABCC5O15440 1437 aa23.05■■□□□ 1.28
TPM2-202ENST00000360958 DAPK1P53355 1430 aa23.03■■□□□ 1.28
TPM2-202ENST00000360958 DHX29Q7Z478 1369 aaKnown RBP23.01■■□□□ 1.27
TPM2-202ENST00000360958 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
TPM2-202ENST00000360958 RRBP1Q9P2E9 1410 aaKnown RBP22.97■■□□□ 1.27
TPM2-202ENST00000360958 ADGRL2O95490 1459 aa22.95■■□□□ 1.26
TPM2-202ENST00000360958 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
TPM2-202ENST00000360958 PTPRMP28827 1452 aa22.93■■□□□ 1.26
TPM2-202ENST00000360958 FAM50AQ14320 339 aaKnown RBP22.93■■□□□ 1.26
TPM2-202ENST00000360958 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
TPM2-202ENST00000360958 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
TPM2-202ENST00000360958 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
TPM2-202ENST00000360958 FER1L4A9Z1Z3 1794 aa22.92■■□□□ 1.26
TPM2-202ENST00000360958 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
TPM2-202ENST00000360958 FAM135AQ9P2D6 1515 aa22.91■■□□□ 1.26
TPM2-202ENST00000360958 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
TPM2-202ENST00000360958 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
TPM2-202ENST00000360958 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
TPM2-202ENST00000360958 KIF15Q9NS87 1388 aa22.89■■□□□ 1.26
TPM2-202ENST00000360958 RIMS1Q86UR5 1692 aaKnown RBP22.89■■□□□ 1.25
TPM2-202ENST00000360958 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
TPM2-202ENST00000360958 MLECQ14165 292 aa22.87■■□□□ 1.25
TPM2-202ENST00000360958 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
TPM2-202ENST00000360958 RNF17Q9BXT8 1623 aaKnown RBP22.86■■□□□ 1.25
TPM2-202ENST00000360958 MROH2AA6NES4 1674 aa22.84■■□□□ 1.25
TPM2-202ENST00000360958 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
TPM2-202ENST00000360958 KIF3BO15066 747 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms