RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
TRIM9-203ENST00000360392 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.28
TRIM9-203ENST00000360392 NEFMP07197 916 aa13.27□□□□□ -0.29
TRIM9-203ENST00000360392 GRIN2BQ13224 1484 aa13.27□□□□□ -0.29
TRIM9-203ENST00000360392 B4GALNT3Q6L9W6 998 aa13.27□□□□□ -0.29
TRIM9-203ENST00000360392 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.29
TRIM9-203ENST00000360392 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
TRIM9-203ENST00000360392 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
TRIM9-203ENST00000360392 SAMD9Q5K651 1589 aa13.25□□□□□ -0.29
TRIM9-203ENST00000360392 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
TRIM9-203ENST00000360392 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
TRIM9-203ENST00000360392 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
TRIM9-203ENST00000360392 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
TRIM9-203ENST00000360392 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM9-203ENST00000360392 IQGAP2Q13576 1575 aa13.21□□□□□ -0.29
TRIM9-203ENST00000360392 NAIPQ13075 1403 aa13.21□□□□□ -0.29
TRIM9-203ENST00000360392 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.3
TRIM9-203ENST00000360392 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
TRIM9-203ENST00000360392 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
TRIM9-203ENST00000360392 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
TRIM9-203ENST00000360392 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
TRIM9-203ENST00000360392 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
TRIM9-203ENST00000360392 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
TRIM9-203ENST00000360392 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
TRIM9-203ENST00000360392 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
TRIM9-203ENST00000360392 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
TRIM9-203ENST00000360392 PPP4R2Q9NY27 417 aa13.18□□□□□ -0.3
TRIM9-203ENST00000360392 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
TRIM9-203ENST00000360392 SUPT6HQ7KZ85 1726 aaKnown RBP13.17□□□□□ -0.3
TRIM9-203ENST00000360392 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
TRIM9-203ENST00000360392 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM9-203ENST00000360392 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
TRIM9-203ENST00000360392 UACAQ9BZF9 1416 aa13.16□□□□□ -0.3
TRIM9-203ENST00000360392 PODXL2Q9NZ53 605 aa13.16□□□□□ -0.3
TRIM9-203ENST00000360392 UGGT2Q9NYU1 1516 aa13.15□□□□□ -0.3
TRIM9-203ENST00000360392 IFT140Q96RY7 1462 aa13.15□□□□□ -0.31
TRIM9-203ENST00000360392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM9-203ENST00000360392 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
TRIM9-203ENST00000360392 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
TRIM9-203ENST00000360392 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
TRIM9-203ENST00000360392 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM9-203ENST00000360392 KDM6BO15054 1643 aa13.11□□□□□ -0.31
TRIM9-203ENST00000360392 IPO9Q96P70 1041 aaKnown RBP13.11□□□□□ -0.31
TRIM9-203ENST00000360392 ARXQ96QS3 562 aa13.11□□□□□ -0.31
TRIM9-203ENST00000360392 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
TRIM9-203ENST00000360392 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
TRIM9-203ENST00000360392 WDR62O43379 1518 aa13.1□□□□□ -0.31
TRIM9-203ENST00000360392 BRPF3Q9ULD4 1205 aa13.1□□□□□ -0.31
TRIM9-203ENST00000360392 DISP1Q96F81 1524 aa13.1□□□□□ -0.31
TRIM9-203ENST00000360392 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
TRIM9-203ENST00000360392 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
TRIM9-203ENST00000360392 PKD2Q13563 968 aa13.09□□□□□ -0.31
TRIM9-203ENST00000360392 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
TRIM9-203ENST00000360392 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
TRIM9-203ENST00000360392 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
TRIM9-203ENST00000360392 NBPF8Q3BBV2 869 aa13.08□□□□□ -0.32
TRIM9-203ENST00000360392 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
TRIM9-203ENST00000360392 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
TRIM9-203ENST00000360392 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
TRIM9-203ENST00000360392 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
TRIM9-203ENST00000360392 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
TRIM9-203ENST00000360392 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
TRIM9-203ENST00000360392 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
TRIM9-203ENST00000360392 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
TRIM9-203ENST00000360392 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
TRIM9-203ENST00000360392 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
TRIM9-203ENST00000360392 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
TRIM9-203ENST00000360392 DAPK1P53355 1430 aa13.03□□□□□ -0.32
TRIM9-203ENST00000360392 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
TRIM9-203ENST00000360392 ABCC5O15440 1437 aa13.02□□□□□ -0.32
TRIM9-203ENST00000360392 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.32
TRIM9-203ENST00000360392 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.32
TRIM9-203ENST00000360392 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
TRIM9-203ENST00000360392 CEP170Q5SW79 1584 aa13.01□□□□□ -0.33
TRIM9-203ENST00000360392 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
TRIM9-203ENST00000360392 ARID4BQ4LE39 1312 aaPredicted RBP13□□□□□ -0.33
TRIM9-203ENST00000360392 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
TRIM9-203ENST00000360392 NUP155O75694 1391 aa13□□□□□ -0.33
TRIM9-203ENST00000360392 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
TRIM9-203ENST00000360392 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
TRIM9-203ENST00000360392 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
TRIM9-203ENST00000360392 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
TRIM9-203ENST00000360392 TROQ12816 1431 aaPredicted RBP12.97□□□□□ -0.33
TRIM9-203ENST00000360392 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
TRIM9-203ENST00000360392 KDM5BQ9UGL1 1544 aa12.96□□□□□ -0.33
TRIM9-203ENST00000360392 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
TRIM9-203ENST00000360392 KIF14Q15058 1648 aa12.96□□□□□ -0.34
TRIM9-203ENST00000360392 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.34
TRIM9-203ENST00000360392 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
TRIM9-203ENST00000360392 GSE1Q14687 1217 aa12.95□□□□□ -0.34
TRIM9-203ENST00000360392 SENP3Q9H4L4 574 aaPredicted RBP12.95□□□□□ -0.34
TRIM9-203ENST00000360392 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
TRIM9-203ENST00000360392 PTPRGP23470 1445 aa12.94□□□□□ -0.34
TRIM9-203ENST00000360392 GPATCH8Q9UKJ3 1502 aaKnown RBP12.93□□□□□ -0.34
TRIM9-203ENST00000360392 GCC2Q8IWJ2 1684 aa12.93□□□□□ -0.34
TRIM9-203ENST00000360392 ANKRD30BQ9BXX2 1392 aa12.93□□□□□ -0.34
TRIM9-203ENST00000360392 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
TRIM9-203ENST00000360392 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
TRIM9-203ENST00000360392 ANKRD30AQ9BXX3 1397 aa12.92□□□□□ -0.34
TRIM9-203ENST00000360392 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms