RNA–Protein interactions for RNA: ENST00000360027.4

SH2D1A-201, Transcript of SH2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH2D1A, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1A-201ENST00000360027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
SH2D1A-201ENST00000360027 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
SH2D1A-201ENST00000360027 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
SH2D1A-201ENST00000360027 FANCAO15360 1455 aa16.2■□□□□ 0.18
SH2D1A-201ENST00000360027 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
SH2D1A-201ENST00000360027 DENND4BO75064 1496 aaPredicted RBP16.17■□□□□ 0.18
SH2D1A-201ENST00000360027 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
SH2D1A-201ENST00000360027 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
SH2D1A-201ENST00000360027 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
SH2D1A-201ENST00000360027 TTC37Q6PGP7 1564 aa16.15■□□□□ 0.18
SH2D1A-201ENST00000360027 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
SH2D1A-201ENST00000360027 KIF14Q15058 1648 aa16.14■□□□□ 0.17
SH2D1A-201ENST00000360027 LOC105371045A0A1W2PR82 267 aa16.13■□□□□ 0.17
SH2D1A-201ENST00000360027 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
SH2D1A-201ENST00000360027 SCAPERQ9BY12 1400 aa16.11■□□□□ 0.17
SH2D1A-201ENST00000360027 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
SH2D1A-201ENST00000360027 POGZQ7Z3K3 1410 aa16.09■□□□□ 0.17
SH2D1A-201ENST00000360027 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
SH2D1A-201ENST00000360027 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
SH2D1A-201ENST00000360027 ZMYM4Q5VZL5 1548 aa16.07■□□□□ 0.16
SH2D1A-201ENST00000360027 FRMPD1Q5SYB0 1578 aa16.06■□□□□ 0.16
SH2D1A-201ENST00000360027 ZNF518AQ6AHZ1 1483 aa16.05■□□□□ 0.16
SH2D1A-201ENST00000360027 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
SH2D1A-201ENST00000360027 LRRIQ1Q96JM4 1722 aa16.04■□□□□ 0.16
SH2D1A-201ENST00000360027 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
SH2D1A-201ENST00000360027 KIAA1107Q9UPP5 1409 aa16.02■□□□□ 0.16
SH2D1A-201ENST00000360027 POTEHQ6S545 545 aa16.02■□□□□ 0.16
SH2D1A-201ENST00000360027 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
SH2D1A-201ENST00000360027 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
SH2D1A-201ENST00000360027 ARHGEF40Q8TER5 1519 aa16.01■□□□□ 0.15
SH2D1A-201ENST00000360027 MYO5CQ9NQX4 1742 aa16.01■□□□□ 0.15
SH2D1A-201ENST00000360027 EHBP1L1Q8N3D4 1523 aa16■□□□□ 0.15
SH2D1A-201ENST00000360027 RICTORQ6R327 1708 aa16■□□□□ 0.15
SH2D1A-201ENST00000360027 CFDP1Q9UEE9 299 aaPredicted RBP16■□□□□ 0.15
SH2D1A-201ENST00000360027 PLEKHH2Q8IVE3 1493 aa15.99■□□□□ 0.15
SH2D1A-201ENST00000360027 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
SH2D1A-201ENST00000360027 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
SH2D1A-201ENST00000360027 ZFYVE16Q7Z3T8 1539 aa15.99■□□□□ 0.15
SH2D1A-201ENST00000360027 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
SH2D1A-201ENST00000360027 KDM5CP41229 1560 aa15.98■□□□□ 0.15
SH2D1A-201ENST00000360027 ATP10AO60312 1499 aa15.97■□□□□ 0.15
SH2D1A-201ENST00000360027 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
SH2D1A-201ENST00000360027 ABCC1P33527 1531 aa15.96■□□□□ 0.15
SH2D1A-201ENST00000360027 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
SH2D1A-201ENST00000360027 C9orf84Q5VXU9 1444 aa15.94■□□□□ 0.14
SH2D1A-201ENST00000360027 TRAPPC8Q9Y2L5 1435 aa15.94■□□□□ 0.14
SH2D1A-201ENST00000360027 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
SH2D1A-201ENST00000360027 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
SH2D1A-201ENST00000360027 CDC42BPBQ9Y5S2 1711 aa15.93■□□□□ 0.14
SH2D1A-201ENST00000360027 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
SH2D1A-201ENST00000360027 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
SH2D1A-201ENST00000360027 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
SH2D1A-201ENST00000360027 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
SH2D1A-201ENST00000360027 REREQ9P2R6 1566 aa15.9■□□□□ 0.14
SH2D1A-201ENST00000360027 ADAMTSL3P82987 1691 aa15.89■□□□□ 0.13
SH2D1A-201ENST00000360027 HNRNPMP52272 730 aaKnown RBP eCLIP15.89■□□□□ 0.13
SH2D1A-201ENST00000360027 APLP2Q06481 763 aa15.89■□□□□ 0.13
SH2D1A-201ENST00000360027 SPAG9O60271 1321 aaKnown RBP15.89■□□□□ 0.13
SH2D1A-201ENST00000360027 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
SH2D1A-201ENST00000360027 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
SH2D1A-201ENST00000360027 PTPRMP28827 1452 aa15.88■□□□□ 0.13
SH2D1A-201ENST00000360027 SAMD9LQ8IVG5 1584 aa15.87■□□□□ 0.13
SH2D1A-201ENST00000360027 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
SH2D1A-201ENST00000360027 MBD5Q9P267 1494 aa15.87■□□□□ 0.13
SH2D1A-201ENST00000360027 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
SH2D1A-201ENST00000360027 AGLP35573 1532 aa15.87■□□□□ 0.13
SH2D1A-201ENST00000360027 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
SH2D1A-201ENST00000360027 BCORL1Q5H9F3 1711 aa15.86■□□□□ 0.13
SH2D1A-201ENST00000360027 KANK4Q5T7N3 995 aaPredicted RBP15.86■□□□□ 0.13
SH2D1A-201ENST00000360027 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
SH2D1A-201ENST00000360027 MIA2Q96PC5 1412 aa15.85■□□□□ 0.13
SH2D1A-201ENST00000360027 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
SH2D1A-201ENST00000360027 ITSN2Q9NZM3 1697 aa15.84■□□□□ 0.13
SH2D1A-201ENST00000360027 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
SH2D1A-201ENST00000360027 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
SH2D1A-201ENST00000360027 DIP2CQ9Y2E4 1556 aa15.83■□□□□ 0.13
SH2D1A-201ENST00000360027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
SH2D1A-201ENST00000360027 MYOM3Q5VTT5 1437 aa15.8■□□□□ 0.12
SH2D1A-201ENST00000360027 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
SH2D1A-201ENST00000360027 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
SH2D1A-201ENST00000360027 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
SH2D1A-201ENST00000360027 MLECQ14165 292 aa15.78■□□□□ 0.12
SH2D1A-201ENST00000360027 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
SH2D1A-201ENST00000360027 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
SH2D1A-201ENST00000360027 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
SH2D1A-201ENST00000360027 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.12
SH2D1A-201ENST00000360027 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.12
SH2D1A-201ENST00000360027 MADDQ8WXG6 1647 aa15.77■□□□□ 0.12
SH2D1A-201ENST00000360027 A2MP01023 1474 aa15.77■□□□□ 0.11
SH2D1A-201ENST00000360027 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
SH2D1A-201ENST00000360027 INO80Q9ULG1 1556 aaPredicted RBP15.76■□□□□ 0.11
SH2D1A-201ENST00000360027 SIGLEC1Q9BZZ2 1709 aa15.75■□□□□ 0.11
SH2D1A-201ENST00000360027 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
SH2D1A-201ENST00000360027 ESF1Q9H501 851 aaKnown RBP15.74■□□□□ 0.11
SH2D1A-201ENST00000360027 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
SH2D1A-201ENST00000360027 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
SH2D1A-201ENST00000360027 TCOF1Q13428 1488 aaKnown RBP15.68■□□□□ 0.1
SH2D1A-201ENST00000360027 LMTK3Q96Q04 1460 aa15.68■□□□□ 0.1
SH2D1A-201ENST00000360027 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
SH2D1A-201ENST00000360027 MAST1Q9Y2H9 1570 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms