RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
PDLIM5-203ENST00000359265 ARID3CA6NKF2 412 aa21.12■□□□□ 0.97
PDLIM5-203ENST00000359265 HSPA2P54652 639 aa21.11■□□□□ 0.97
PDLIM5-203ENST00000359265 NCOA2Q15596 1464 aa21.11■□□□□ 0.97
PDLIM5-203ENST00000359265 CD109Q6YHK3 1445 aa21.08■□□□□ 0.97
PDLIM5-203ENST00000359265 PHLDB1Q86UU1 1377 aa21.08■□□□□ 0.96
PDLIM5-203ENST00000359265 TROQ12816 1431 aaPredicted RBP21.06■□□□□ 0.96
PDLIM5-203ENST00000359265 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
PDLIM5-203ENST00000359265 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
PDLIM5-203ENST00000359265 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
PDLIM5-203ENST00000359265 ITSN2Q9NZM3 1697 aa21.04■□□□□ 0.96
PDLIM5-203ENST00000359265 KIF14Q15058 1648 aa21.04■□□□□ 0.96
PDLIM5-203ENST00000359265 KCNH8Q96L42 1107 aa21.03■□□□□ 0.96
PDLIM5-203ENST00000359265 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
PDLIM5-203ENST00000359265 MADDQ8WXG6 1647 aa21■□□□□ 0.95
PDLIM5-203ENST00000359265 SPATA31D1Q6ZQQ2 1576 aa21■□□□□ 0.95
PDLIM5-203ENST00000359265 FGD6Q6ZV73 1430 aa20.99■□□□□ 0.95
PDLIM5-203ENST00000359265 BCORL1Q5H9F3 1711 aa20.98■□□□□ 0.95
PDLIM5-203ENST00000359265 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
PDLIM5-203ENST00000359265 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
PDLIM5-203ENST00000359265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDLIM5-203ENST00000359265 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
PDLIM5-203ENST00000359265 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
PDLIM5-203ENST00000359265 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
PDLIM5-203ENST00000359265 TCOF1Q13428 1488 aaKnown RBP20.91■□□□□ 0.94
PDLIM5-203ENST00000359265 ARID4BQ4LE39 1312 aaPredicted RBP20.9■□□□□ 0.94
PDLIM5-203ENST00000359265 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
PDLIM5-203ENST00000359265 RIMS1Q86UR5 1692 aaKnown RBP20.89■□□□□ 0.94
PDLIM5-203ENST00000359265 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
PDLIM5-203ENST00000359265 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
PDLIM5-203ENST00000359265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.87■□□□□ 0.93
PDLIM5-203ENST00000359265 PREX2Q70Z35 1606 aa20.86■□□□□ 0.93
PDLIM5-203ENST00000359265 TTC37Q6PGP7 1564 aa20.85■□□□□ 0.93
PDLIM5-203ENST00000359265 ABCA9Q8IUA7 1624 aa20.84■□□□□ 0.93
PDLIM5-203ENST00000359265 GPATCH8Q9UKJ3 1502 aaKnown RBP20.83■□□□□ 0.93
PDLIM5-203ENST00000359265 CDC42BPBQ9Y5S2 1711 aa20.82■□□□□ 0.92
PDLIM5-203ENST00000359265 DNMT1P26358 1616 aaKnown RBP20.79■□□□□ 0.92
PDLIM5-203ENST00000359265 CAMSAP2Q08AD1 1489 aa20.78■□□□□ 0.92
PDLIM5-203ENST00000359265 ITGAEP38570 1179 aa20.77■□□□□ 0.92
PDLIM5-203ENST00000359265 CROCC2H7BZ55 1655 aa20.77■□□□□ 0.91
PDLIM5-203ENST00000359265 FRMPD1Q5SYB0 1578 aa20.76■□□□□ 0.91
PDLIM5-203ENST00000359265 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
PDLIM5-203ENST00000359265 ARHGAP5Q13017 1502 aa20.74■□□□□ 0.91
PDLIM5-203ENST00000359265 PLCH2O75038 1416 aa20.74■□□□□ 0.91
PDLIM5-203ENST00000359265 GCC2Q8IWJ2 1684 aa20.73■□□□□ 0.91
PDLIM5-203ENST00000359265 ADGBQ8N7X0 1667 aa20.73■□□□□ 0.91
PDLIM5-203ENST00000359265 STRCQ7RTU9 1775 aa20.71■□□□□ 0.91
PDLIM5-203ENST00000359265 SAMD9LQ8IVG5 1584 aa20.71■□□□□ 0.91
PDLIM5-203ENST00000359265 CFAP74Q9C0B2 1584 aa20.71■□□□□ 0.91
PDLIM5-203ENST00000359265 DAPK1P53355 1430 aa20.7■□□□□ 0.9
PDLIM5-203ENST00000359265 SIGLEC1Q9BZZ2 1709 aa20.69■□□□□ 0.9
PDLIM5-203ENST00000359265 PLEKHH2Q8IVE3 1493 aa20.68■□□□□ 0.9
PDLIM5-203ENST00000359265 ARHGEF5Q12774 1597 aa20.68■□□□□ 0.9
PDLIM5-203ENST00000359265 PTPRKQ15262 1439 aa20.67■□□□□ 0.9
PDLIM5-203ENST00000359265 YEATS2Q9ULM3 1422 aa20.67■□□□□ 0.9
PDLIM5-203ENST00000359265 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
PDLIM5-203ENST00000359265 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
PDLIM5-203ENST00000359265 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
PDLIM5-203ENST00000359265 NEO1Q92859 1461 aa20.65■□□□□ 0.9
PDLIM5-203ENST00000359265 ZNF777Q9ULD5 760 aaPredicted RBP20.65■□□□□ 0.9
PDLIM5-203ENST00000359265 FANCAO15360 1455 aa20.64■□□□□ 0.89
PDLIM5-203ENST00000359265 HFM1A2PYH4 1435 aa20.64■□□□□ 0.89
PDLIM5-203ENST00000359265 ZNF644Q9H582 1327 aaPredicted RBP20.64■□□□□ 0.89
PDLIM5-203ENST00000359265 HRCP23327 699 aa20.64■□□□□ 0.89
PDLIM5-203ENST00000359265 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
PDLIM5-203ENST00000359265 ABCC5O15440 1437 aa20.63■□□□□ 0.89
PDLIM5-203ENST00000359265 MLECQ14165 292 aa20.62■□□□□ 0.89
PDLIM5-203ENST00000359265 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
PDLIM5-203ENST00000359265 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
PDLIM5-203ENST00000359265 RAB3GAP2Q9H2M9 1393 aa20.61■□□□□ 0.89
PDLIM5-203ENST00000359265 CCER1Q8TC90 406 aaPredicted RBP20.61■□□□□ 0.89
PDLIM5-203ENST00000359265 ABCC1P33527 1531 aa20.61■□□□□ 0.89
PDLIM5-203ENST00000359265 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
PDLIM5-203ENST00000359265 SYCP2Q9BX26 1530 aa20.6■□□□□ 0.89
PDLIM5-203ENST00000359265 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
PDLIM5-203ENST00000359265 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
PDLIM5-203ENST00000359265 LTBP4Q8N2S1 1624 aa20.58■□□□□ 0.89
PDLIM5-203ENST00000359265 CCDC141Q6ZP82 1450 aa20.57■□□□□ 0.88
PDLIM5-203ENST00000359265 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
PDLIM5-203ENST00000359265 NAIPQ13075 1403 aa20.57■□□□□ 0.88
PDLIM5-203ENST00000359265 RSPH4AQ5TD94 716 aa20.57■□□□□ 0.88
PDLIM5-203ENST00000359265 POGZQ7Z3K3 1410 aa20.57■□□□□ 0.88
PDLIM5-203ENST00000359265 ADGRL2O95490 1459 aa20.56■□□□□ 0.88
PDLIM5-203ENST00000359265 RICTORQ6R327 1708 aa20.56■□□□□ 0.88
PDLIM5-203ENST00000359265 PREX1Q8TCU6 1659 aa20.56■□□□□ 0.88
PDLIM5-203ENST00000359265 FER1L4A9Z1Z3 1794 aa20.56■□□□□ 0.88
PDLIM5-203ENST00000359265 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
PDLIM5-203ENST00000359265 MAST1Q9Y2H9 1570 aa20.55■□□□□ 0.88
PDLIM5-203ENST00000359265 CHIC2Q9UKJ5 165 aa20.53■□□□□ 0.88
PDLIM5-203ENST00000359265 DENND4BO75064 1496 aaPredicted RBP20.52■□□□□ 0.88
PDLIM5-203ENST00000359265 C9orf84Q5VXU9 1444 aa20.52■□□□□ 0.87
PDLIM5-203ENST00000359265 PTPRTO14522 1441 aa20.51■□□□□ 0.87
PDLIM5-203ENST00000359265 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
PDLIM5-203ENST00000359265 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM5-203ENST00000359265 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
PDLIM5-203ENST00000359265 ARHGEF12Q9NZN5 1544 aa20.49■□□□□ 0.87
PDLIM5-203ENST00000359265 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
PDLIM5-203ENST00000359265 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
PDLIM5-203ENST00000359265 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
PDLIM5-203ENST00000359265 MSH5O43196 834 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms