RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
TRAPPC4-201ENST00000359005 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-201ENST00000359005 SCAPERQ9BY12 1400 aa16.24■□□□□ 0.19
TRAPPC4-201ENST00000359005 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
TRAPPC4-201ENST00000359005 YEATS2Q9ULM3 1422 aa16.22■□□□□ 0.19
TRAPPC4-201ENST00000359005 KIF14Q15058 1648 aa16.21■□□□□ 0.19
TRAPPC4-201ENST00000359005 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-201ENST00000359005 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-201ENST00000359005 MTUS2Q5JR59 1369 aa16.18■□□□□ 0.18
TRAPPC4-201ENST00000359005 HRCP23327 699 aa16.18■□□□□ 0.18
TRAPPC4-201ENST00000359005 LRRIQ1Q96JM4 1722 aa16.18■□□□□ 0.18
TRAPPC4-201ENST00000359005 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
TRAPPC4-201ENST00000359005 EHBP1L1Q8N3D4 1523 aa16.16■□□□□ 0.18
TRAPPC4-201ENST00000359005 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-201ENST00000359005 MLECQ14165 292 aa16.14■□□□□ 0.17
TRAPPC4-201ENST00000359005 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.17
TRAPPC4-201ENST00000359005 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
TRAPPC4-201ENST00000359005 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
TRAPPC4-201ENST00000359005 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
TRAPPC4-201ENST00000359005 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-201ENST00000359005 PTPRMP28827 1452 aa16.11■□□□□ 0.17
TRAPPC4-201ENST00000359005 ARHGAP5Q13017 1502 aa16.11■□□□□ 0.17
TRAPPC4-201ENST00000359005 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-201ENST00000359005 ZMYM4Q5VZL5 1548 aa16.1■□□□□ 0.17
TRAPPC4-201ENST00000359005 ARHGEF40Q8TER5 1519 aa16.1■□□□□ 0.17
TRAPPC4-201ENST00000359005 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
TRAPPC4-201ENST00000359005 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-201ENST00000359005 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
TRAPPC4-201ENST00000359005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.173e-6■■■■□ 26.4
TRAPPC4-201ENST00000359005 ZFYVE16Q7Z3T8 1539 aa16.09■□□□□ 0.17
TRAPPC4-201ENST00000359005 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.17
TRAPPC4-201ENST00000359005 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
TRAPPC4-201ENST00000359005 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-201ENST00000359005 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.16
TRAPPC4-201ENST00000359005 ATP10AO60312 1499 aa16.07■□□□□ 0.16
TRAPPC4-201ENST00000359005 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
TRAPPC4-201ENST00000359005 HECW2Q9P2P5 1572 aa16.05■□□□□ 0.16
TRAPPC4-201ENST00000359005 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-201ENST00000359005 MYT1LQ9UL68 1186 aa16.05■□□□□ 0.16
TRAPPC4-201ENST00000359005 ZNF518AQ6AHZ1 1483 aa16.03■□□□□ 0.16
TRAPPC4-201ENST00000359005 BCORL1Q5H9F3 1711 aa16.03■□□□□ 0.16
TRAPPC4-201ENST00000359005 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-201ENST00000359005 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-201ENST00000359005 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.16
TRAPPC4-201ENST00000359005 MADDQ8WXG6 1647 aa16.02■□□□□ 0.16
TRAPPC4-201ENST00000359005 NCOA2Q15596 1464 aa16.02■□□□□ 0.15
TRAPPC4-201ENST00000359005 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
TRAPPC4-201ENST00000359005 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
TRAPPC4-201ENST00000359005 ABCC1P33527 1531 aa16.01■□□□□ 0.15
TRAPPC4-201ENST00000359005 MLH3Q9UHC1 1453 aa16.01■□□□□ 0.15
TRAPPC4-201ENST00000359005 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
TRAPPC4-201ENST00000359005 KDM5CP41229 1560 aa16■□□□□ 0.15
TRAPPC4-201ENST00000359005 HSPA2P54652 639 aa15.99■□□□□ 0.15
TRAPPC4-201ENST00000359005 FGD6Q6ZV73 1430 aa15.99■□□□□ 0.15
TRAPPC4-201ENST00000359005 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
TRAPPC4-201ENST00000359005 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
TRAPPC4-201ENST00000359005 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
TRAPPC4-201ENST00000359005 SPAG9O60271 1321 aaKnown RBP15.96■□□□□ 0.15
TRAPPC4-201ENST00000359005 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
TRAPPC4-201ENST00000359005 KIAA1107Q9UPP5 1409 aa15.96■□□□□ 0.15
TRAPPC4-201ENST00000359005 ACIN1Q9UKV3 1341 aaKnown RBP15.95■□□□□ 0.14
TRAPPC4-201ENST00000359005 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
TRAPPC4-201ENST00000359005 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
TRAPPC4-201ENST00000359005 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
TRAPPC4-201ENST00000359005 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
TRAPPC4-201ENST00000359005 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
TRAPPC4-201ENST00000359005 RIMS1Q86UR5 1692 aaKnown RBP15.92■□□□□ 0.14
TRAPPC4-201ENST00000359005 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
TRAPPC4-201ENST00000359005 ILDR1Q86SU0 546 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC4-201ENST00000359005 CLSPNQ9HAW4 1339 aa15.92■□□□□ 0.14
TRAPPC4-201ENST00000359005 ABCA6Q8N139 1617 aa15.91■□□□□ 0.14
TRAPPC4-201ENST00000359005 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
TRAPPC4-201ENST00000359005 KIDINS220Q9ULH0 1771 aa15.89■□□□□ 0.13
TRAPPC4-201ENST00000359005 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
TRAPPC4-201ENST00000359005 ITGAEP38570 1179 aa15.88■□□□□ 0.13
TRAPPC4-201ENST00000359005 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
TRAPPC4-201ENST00000359005 AGLP35573 1532 aa15.87■□□□□ 0.13
TRAPPC4-201ENST00000359005 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
TRAPPC4-201ENST00000359005 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
TRAPPC4-201ENST00000359005 GGT6Q6P531 493 aa15.84■□□□□ 0.13
TRAPPC4-201ENST00000359005 A2MP01023 1474 aa15.83■□□□□ 0.12
TRAPPC4-201ENST00000359005 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
TRAPPC4-201ENST00000359005 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
TRAPPC4-201ENST00000359005 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
TRAPPC4-201ENST00000359005 CAMSAP2Q08AD1 1489 aa15.8■□□□□ 0.12
TRAPPC4-201ENST00000359005 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
TRAPPC4-201ENST00000359005 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
TRAPPC4-201ENST00000359005 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
TRAPPC4-201ENST00000359005 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC4-201ENST00000359005 RSPH4AQ5TD94 716 aa15.78■□□□□ 0.12
TRAPPC4-201ENST00000359005 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
TRAPPC4-201ENST00000359005 RAB3GAP2Q9H2M9 1393 aa15.77■□□□□ 0.12
TRAPPC4-201ENST00000359005 KIF3BO15066 747 aa15.77■□□□□ 0.12
TRAPPC4-201ENST00000359005 PLXNC1O60486 1568 aa15.77■□□□□ 0.11
TRAPPC4-201ENST00000359005 CCDC141Q6ZP82 1450 aa15.76■□□□□ 0.11
TRAPPC4-201ENST00000359005 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
TRAPPC4-201ENST00000359005 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
TRAPPC4-201ENST00000359005 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
TRAPPC4-201ENST00000359005 DNMT1P26358 1616 aaKnown RBP15.75■□□□□ 0.11
TRAPPC4-201ENST00000359005 ROCK1Q13464 1354 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms