RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.594e-9■■□□□ 11.7
CD46-205ENST00000358170 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
CD46-205ENST00000358170 IQGAP2Q13576 1575 aa11.38□□□□□ -0.59
CD46-205ENST00000358170 KDM6BO15054 1643 aa11.38□□□□□ -0.59
CD46-205ENST00000358170 PLEKHD1A6NEE1 506 aa11.37□□□□□ -0.59
CD46-205ENST00000358170 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
CD46-205ENST00000358170 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
CD46-205ENST00000358170 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
CD46-205ENST00000358170 HNRNPMP52272 730 aaKnown RBP eCLIP11.36□□□□□ -0.599e-8■■■■■ 28.4
CD46-205ENST00000358170 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
CD46-205ENST00000358170 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
CD46-205ENST00000358170 TSPY4P0CV99 314 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 TSPY10P0CW01 314 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 PLB1Q6P1J6 1458 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
CD46-205ENST00000358170 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 ABCC5O15440 1437 aa11.34□□□□□ -0.59
CD46-205ENST00000358170 DAPK1P53355 1430 aa11.33□□□□□ -0.6
CD46-205ENST00000358170 HECW1Q76N89 1606 aa11.33□□□□□ -0.6
CD46-205ENST00000358170 CCDC7Q96M83 1385 aa11.33□□□□□ -0.6
CD46-205ENST00000358170 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
CD46-205ENST00000358170 ANKRD30BQ9BXX2 1392 aa11.32□□□□□ -0.6
CD46-205ENST00000358170 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
CD46-205ENST00000358170 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
CD46-205ENST00000358170 NUP155O75694 1391 aa11.31□□□□□ -0.6
CD46-205ENST00000358170 MIA2Q96PC5 1412 aa11.31□□□□□ -0.6
CD46-205ENST00000358170 MYT1Q01538 1121 aa11.31□□□□□ -0.6
CD46-205ENST00000358170 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
CD46-205ENST00000358170 KIAA0586Q9BVV6 1533 aa11.29□□□□□ -0.6
CD46-205ENST00000358170 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
CD46-205ENST00000358170 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
CD46-205ENST00000358170 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
CD46-205ENST00000358170 TCOF1Q13428 1488 aaKnown RBP11.28□□□□□ -0.6
CD46-205ENST00000358170 WDR62O43379 1518 aa11.28□□□□□ -0.6
CD46-205ENST00000358170 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
CD46-205ENST00000358170 DISP1Q96F81 1524 aa11.27□□□□□ -0.6
CD46-205ENST00000358170 KDM5BQ9UGL1 1544 aa11.27□□□□□ -0.61
CD46-205ENST00000358170 PBRM1Q86U86 1689 aa11.27□□□□□ -0.61
CD46-205ENST00000358170 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
CD46-205ENST00000358170 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
CD46-205ENST00000358170 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
CD46-205ENST00000358170 ARHGEF11O15085 1522 aa11.26□□□□□ -0.61
CD46-205ENST00000358170 ANKRD30AQ9BXX3 1397 aa11.26□□□□□ -0.61
CD46-205ENST00000358170 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
CD46-205ENST00000358170 USP47Q96K76 1375 aa11.25□□□□□ -0.61
CD46-205ENST00000358170 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
CD46-205ENST00000358170 TROQ12816 1431 aaPredicted RBP11.25□□□□□ -0.61
CD46-205ENST00000358170 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
CD46-205ENST00000358170 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
CD46-205ENST00000358170 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
CD46-205ENST00000358170 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
CD46-205ENST00000358170 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
CD46-205ENST00000358170 CAMSAP2Q08AD1 1489 aa11.22□□□□□ -0.61
CD46-205ENST00000358170 ROCK1Q13464 1354 aa11.22□□□□□ -0.61
CD46-205ENST00000358170 PPP4R2Q9NY27 417 aa11.22□□□□□ -0.61
CD46-205ENST00000358170 GPATCH8Q9UKJ3 1502 aaKnown RBP11.22□□□□□ -0.61
CD46-205ENST00000358170 KIAA0556O60303 1618 aa11.21□□□□□ -0.61
CD46-205ENST00000358170 CC2D1BQ5T0F9 858 aaKnown RBP11.2□□□□□ -0.62
CD46-205ENST00000358170 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
CD46-205ENST00000358170 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
CD46-205ENST00000358170 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
CD46-205ENST00000358170 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
CD46-205ENST00000358170 PZPP20742 1482 aa11.18□□□□□ -0.62
CD46-205ENST00000358170 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
CD46-205ENST00000358170 KIF15Q9NS87 1388 aa11.18□□□□□ -0.62
CD46-205ENST00000358170 PTPRGP23470 1445 aa11.17□□□□□ -0.62
CD46-205ENST00000358170 TEX14Q8IWB6 1497 aa11.17□□□□□ -0.62
CD46-205ENST00000358170 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
CD46-205ENST00000358170 KIF14Q15058 1648 aa11.17□□□□□ -0.62
CD46-205ENST00000358170 EIF4G3O43432 1585 aaKnown RBP11.17□□□□□ -0.62
CD46-205ENST00000358170 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
CD46-205ENST00000358170 MSH5O43196 834 aa11.16□□□□□ -0.62
CD46-205ENST00000358170 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
CD46-205ENST00000358170 SYNJ2O15056 1496 aa11.15□□□□□ -0.62
CD46-205ENST00000358170 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
CD46-205ENST00000358170 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
CD46-205ENST00000358170 ATP10BO94823 1461 aa11.14□□□□□ -0.63
CD46-205ENST00000358170 SPATA31E1Q6ZUB1 1445 aa11.14□□□□□ -0.63
CD46-205ENST00000358170 CEP170Q5SW79 1584 aa11.13□□□□□ -0.63
CD46-205ENST00000358170 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
CD46-205ENST00000358170 NUDCQ9Y266 331 aa11.13□□□□□ -0.63
CD46-205ENST00000358170 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
CD46-205ENST00000358170 DHX29Q7Z478 1369 aaKnown RBP11.11□□□□□ -0.63
CD46-205ENST00000358170 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
CD46-205ENST00000358170 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
CD46-205ENST00000358170 PANK3Q9H999 370 aa11.08□□□□□ -0.64
CD46-205ENST00000358170 CCDC144AA2RUR9 1427 aa11.08□□□□□ -0.64
CD46-205ENST00000358170 PLIN1O60240 522 aa11.08□□□□□ -0.64
CD46-205ENST00000358170 NBR1Q14596 966 aa11.08□□□□□ -0.64
CD46-205ENST00000358170 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
CD46-205ENST00000358170 CHGAP10645 457 aaKnown RBP11.06□□□□□ -0.64
CD46-205ENST00000358170 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
CD46-205ENST00000358170 EXOC6Q8TAG9 804 aa11.06□□□□□ -0.64
CD46-205ENST00000358170 NUP160Q12769 1436 aa11.05□□□□□ -0.64
CD46-205ENST00000358170 RALBP1Q15311 655 aa11.04□□□□□ -0.64
CD46-205ENST00000358170 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
CD46-205ENST00000358170 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
CD46-205ENST00000358170 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
CD46-205ENST00000358170 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms