RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 CDC42BPBQ9Y5S2 1711 aa22.95■■□□□ 1.27
CCNE1-202ENST00000357943 FANCAO15360 1455 aa22.95■■□□□ 1.26
CCNE1-202ENST00000357943 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
CCNE1-202ENST00000357943 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
CCNE1-202ENST00000357943 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
CCNE1-202ENST00000357943 TEX14Q8IWB6 1497 aa22.92■■□□□ 1.26
CCNE1-202ENST00000357943 ITSN2Q9NZM3 1697 aa22.92■■□□□ 1.26
CCNE1-202ENST00000357943 ZNF644Q9H582 1327 aaPredicted RBP22.9■■□□□ 1.26
CCNE1-202ENST00000357943 FGD6Q6ZV73 1430 aa22.89■■□□□ 1.25
CCNE1-202ENST00000357943 MIA2Q96PC5 1412 aa22.89■■□□□ 1.25
CCNE1-202ENST00000357943 NEO1Q92859 1461 aa22.88■■□□□ 1.25
CCNE1-202ENST00000357943 AKNAQ7Z591 1439 aa22.88■■□□□ 1.25
CCNE1-202ENST00000357943 SAMD9LQ8IVG5 1584 aa22.85■■□□□ 1.25
CCNE1-202ENST00000357943 CFAP74Q9C0B2 1584 aa22.85■■□□□ 1.25
CCNE1-202ENST00000357943 ADGRL1O94910 1474 aa22.83■■□□□ 1.25
CCNE1-202ENST00000357943 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
CCNE1-202ENST00000357943 SCAPERQ9BY12 1400 aa22.81■■□□□ 1.24
CCNE1-202ENST00000357943 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
CCNE1-202ENST00000357943 ABCC1P33527 1531 aa22.8■■□□□ 1.24
CCNE1-202ENST00000357943 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
CCNE1-202ENST00000357943 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCNE1-202ENST00000357943 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
CCNE1-202ENST00000357943 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
CCNE1-202ENST00000357943 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
CCNE1-202ENST00000357943 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
CCNE1-202ENST00000357943 SYCP2Q9BX26 1530 aa22.78■■□□□ 1.24
CCNE1-202ENST00000357943 KIAA1107Q9UPP5 1409 aa22.78■■□□□ 1.24
CCNE1-202ENST00000357943 PLEKHH2Q8IVE3 1493 aa22.77■■□□□ 1.24
CCNE1-202ENST00000357943 RAPGEF3O95398 923 aa22.77■■□□□ 1.24
CCNE1-202ENST00000357943 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
CCNE1-202ENST00000357943 TRAPPC8Q9Y2L5 1435 aa22.75■■□□□ 1.23
CCNE1-202ENST00000357943 DENND4BO75064 1496 aaPredicted RBP22.75■■□□□ 1.23
CCNE1-202ENST00000357943 AFAP1Q8N556 730 aa22.74■■□□□ 1.23
CCNE1-202ENST00000357943 POGZQ7Z3K3 1410 aa22.72■■□□□ 1.23
CCNE1-202ENST00000357943 KDM6BO15054 1643 aa22.72■■□□□ 1.23
CCNE1-202ENST00000357943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.7■■□□□ 1.22
CCNE1-202ENST00000357943 ZNF518AQ6AHZ1 1483 aa22.69■■□□□ 1.22
CCNE1-202ENST00000357943 FRMPD1Q5SYB0 1578 aa22.69■■□□□ 1.22
CCNE1-202ENST00000357943 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
CCNE1-202ENST00000357943 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
CCNE1-202ENST00000357943 RICTORQ6R327 1708 aa22.67■■□□□ 1.22
CCNE1-202ENST00000357943 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
CCNE1-202ENST00000357943 ABCC5O15440 1437 aa22.67■■□□□ 1.22
CCNE1-202ENST00000357943 DAPK1P53355 1430 aa22.65■■□□□ 1.22
CCNE1-202ENST00000357943 ITGAEP38570 1179 aa22.64■■□□□ 1.22
CCNE1-202ENST00000357943 KDM5CP41229 1560 aa22.64■■□□□ 1.21
CCNE1-202ENST00000357943 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.21
CCNE1-202ENST00000357943 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CCNE1-202ENST00000357943 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CCNE1-202ENST00000357943 SPAG9O60271 1321 aaKnown RBP22.62■■□□□ 1.21
CCNE1-202ENST00000357943 PTPRKQ15262 1439 aa22.61■■□□□ 1.21
CCNE1-202ENST00000357943 ZMYM4Q5VZL5 1548 aa22.59■■□□□ 1.21
CCNE1-202ENST00000357943 CHIC2Q9UKJ5 165 aa22.59■■□□□ 1.21
CCNE1-202ENST00000357943 MYT1LQ9UL68 1186 aa22.59■■□□□ 1.21
CCNE1-202ENST00000357943 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
CCNE1-202ENST00000357943 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.2
CCNE1-202ENST00000357943 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
CCNE1-202ENST00000357943 CROCC2H7BZ55 1655 aa22.56■■□□□ 1.2
CCNE1-202ENST00000357943 HECW2Q9P2P5 1572 aa22.56■■□□□ 1.2
CCNE1-202ENST00000357943 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
CCNE1-202ENST00000357943 YEATS2Q9ULM3 1422 aa22.56■■□□□ 1.2
CCNE1-202ENST00000357943 RTEL1-TNFRSF6BF6WH68 1400 aa22.55■■□□□ 1.2
CCNE1-202ENST00000357943 ATP7AQ04656 1500 aa22.55■■□□□ 1.2
CCNE1-202ENST00000357943 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
CCNE1-202ENST00000357943 INO80Q9ULG1 1556 aaPredicted RBP22.54■■□□□ 1.2
CCNE1-202ENST00000357943 KIDINS220Q9ULH0 1771 aa22.54■■□□□ 1.2
CCNE1-202ENST00000357943 MAST1Q9Y2H9 1570 aa22.54■■□□□ 1.2
CCNE1-202ENST00000357943 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
CCNE1-202ENST00000357943 NCOA1Q15788 1441 aa22.49■■□□□ 1.19
CCNE1-202ENST00000357943 RRP7BPQ9NSQ0 103 aa22.49■■□□□ 1.19
CCNE1-202ENST00000357943 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
CCNE1-202ENST00000357943 ABCA6Q8N139 1617 aa22.48■■□□□ 1.19
CCNE1-202ENST00000357943 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
CCNE1-202ENST00000357943 ARHGEF40Q8TER5 1519 aa22.47■■□□□ 1.19
CCNE1-202ENST00000357943 DIP2CQ9Y2E4 1556 aa22.47■■□□□ 1.19
CCNE1-202ENST00000357943 ROCK1Q13464 1354 aa22.46■■□□□ 1.19
CCNE1-202ENST00000357943 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
CCNE1-202ENST00000357943 PLXNC1O60486 1568 aa22.45■■□□□ 1.18
CCNE1-202ENST00000357943 ATP10AO60312 1499 aa22.44■■□□□ 1.18
CCNE1-202ENST00000357943 ADGBQ8N7X0 1667 aa22.44■■□□□ 1.18
CCNE1-202ENST00000357943 A2MP01023 1474 aa22.42■■□□□ 1.18
CCNE1-202ENST00000357943 DHX29Q7Z478 1369 aaKnown RBP22.4■■□□□ 1.18
CCNE1-202ENST00000357943 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
CCNE1-202ENST00000357943 NAIPQ13075 1403 aa22.37■■□□□ 1.17
CCNE1-202ENST00000357943 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
CCNE1-202ENST00000357943 REREQ9P2R6 1566 aa22.36■■□□□ 1.17
CCNE1-202ENST00000357943 SIGLEC1Q9BZZ2 1709 aa22.36■■□□□ 1.17
CCNE1-202ENST00000357943 ANKRD50Q9ULJ7 1429 aa22.35■■□□□ 1.17
CCNE1-202ENST00000357943 PCGF6Q9BYE7 350 aa22.34■■□□□ 1.17
CCNE1-202ENST00000357943 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
CCNE1-202ENST00000357943 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
CCNE1-202ENST00000357943 KIF3BO15066 747 aa22.31■■□□□ 1.16
CCNE1-202ENST00000357943 AGLP35573 1532 aa22.3■■□□□ 1.16
CCNE1-202ENST00000357943 GCC2Q8IWJ2 1684 aa22.29■■□□□ 1.16
CCNE1-202ENST00000357943 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
CCNE1-202ENST00000357943 MLECQ14165 292 aa22.27■■□□□ 1.16
CCNE1-202ENST00000357943 GGT6Q6P531 493 aa22.26■■□□□ 1.15
CCNE1-202ENST00000357943 EIF2AK4Q9P2K8 1649 aaKnown RBP22.25■■□□□ 1.15
CCNE1-202ENST00000357943 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
CCNE1-202ENST00000357943 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms