RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 KIF12Q96FN5 646 aa5.91□□□□□ -1.46
SMC1B-201ENST00000357450 URB2Q14146 1524 aaKnown RBP5.89□□□□□ -1.47
SMC1B-201ENST00000357450 SUPT6HQ7KZ85 1726 aaKnown RBP5.89□□□□□ -1.47
SMC1B-201ENST00000357450 CUL7Q14999 1698 aa5.89□□□□□ -1.47
SMC1B-201ENST00000357450 BCORL1Q5H9F3 1711 aa5.88□□□□□ -1.47
SMC1B-201ENST00000357450 LHX8Q68G74 356 aa5.88□□□□□ -1.47
SMC1B-201ENST00000357450 FANCD2Q9BXW9 1451 aa5.88□□□□□ -1.47
SMC1B-201ENST00000357450 HECW1Q76N89 1606 aa5.87□□□□□ -1.47
SMC1B-201ENST00000357450 DNMBPQ6XZF7 1577 aa5.87□□□□□ -1.47
SMC1B-201ENST00000357450 GOLGA3Q08378 1498 aa5.86□□□□□ -1.47
SMC1B-201ENST00000357450 STAG3Q9UJ98 1225 aa5.86□□□□□ -1.47
SMC1B-201ENST00000357450 PTPRKQ15262 1439 aa5.86□□□□□ -1.47
SMC1B-201ENST00000357450 ABCA10Q8WWZ4 1543 aa5.86□□□□□ -1.47
SMC1B-201ENST00000357450 CHRM1P11229 460 aaPredicted RBP5.86□□□□□ -1.47
SMC1B-201ENST00000357450 SGIP1Q9BQI5 828 aa5.85□□□□□ -1.47
SMC1B-201ENST00000357450 SHROOM2Q13796 1616 aa5.85□□□□□ -1.47
SMC1B-201ENST00000357450 IFT172Q9UG01 1749 aa5.85□□□□□ -1.47
SMC1B-201ENST00000357450 SPDYE4A6NLX3 237 aa5.85□□□□□ -1.47
SMC1B-201ENST00000357450 IRX5P78411 483 aaPredicted RBP5.85□□□□□ -1.47
SMC1B-201ENST00000357450 JPH4Q96JJ6 628 aa5.85□□□□□ -1.47
SMC1B-201ENST00000357450 GRIN2BQ13224 1484 aa5.84□□□□□ -1.47
SMC1B-201ENST00000357450 ITGAEP38570 1179 aa5.84□□□□□ -1.47
SMC1B-201ENST00000357450 AQRO60306 1485 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMC1B-201ENST00000357450 MYO5CQ9NQX4 1742 aa5.84□□□□□ -1.47
SMC1B-201ENST00000357450 CEP152O94986 1710 aa5.84□□□□□ -1.48
SMC1B-201ENST00000357450 CDC42BPBQ9Y5S2 1711 aa5.83□□□□□ -1.48
SMC1B-201ENST00000357450 RASEFQ8IZ41 740 aa5.83□□□□□ -1.48
SMC1B-201ENST00000357450 ADAMTS12P58397 1594 aa5.83□□□□□ -1.48
SMC1B-201ENST00000357450 PLEKHG5O94827 1062 aa5.83□□□□□ -1.48
SMC1B-201ENST00000357450 TMEM121BQ9BXQ6 578 aaPredicted RBP5.82□□□□□ -1.48
SMC1B-201ENST00000357450 CDK11AQ9UQ88 783 aaPredicted RBP5.82□□□□□ -1.48
SMC1B-201ENST00000357450 EEA1Q15075 1411 aa5.82□□□□□ -1.48
SMC1B-201ENST00000357450 C14orf37Q86TY3 774 aa5.82□□□□□ -1.48
SMC1B-201ENST00000357450 VPS8Q8N3P4 1428 aa5.82□□□□□ -1.48
SMC1B-201ENST00000357450 MBD5Q9P267 1494 aa5.82□□□□□ -1.48
SMC1B-201ENST00000357450 MRC2Q9UBG0 1479 aa5.82□□□□□ -1.48
SMC1B-201ENST00000357450 MYOM1P52179 1685 aa5.81□□□□□ -1.48
SMC1B-201ENST00000357450 PLEKHD1A6NEE1 506 aa5.81□□□□□ -1.48
SMC1B-201ENST00000357450 IQGAP2Q13576 1575 aa5.8□□□□□ -1.48
SMC1B-201ENST00000357450 CHGAP10645 457 aaKnown RBP5.8□□□□□ -1.48
SMC1B-201ENST00000357450 KDM4FA0A1W2PPD8 638 aa5.8□□□□□ -1.48
SMC1B-201ENST00000357450 BMP2KQ9NSY1 1161 aaPredicted RBP5.8□□□□□ -1.48
SMC1B-201ENST00000357450 PTPN23Q9H3S7 1636 aa5.79□□□□□ -1.48
SMC1B-201ENST00000357450 UGGT2Q9NYU1 1516 aa5.79□□□□□ -1.48
SMC1B-201ENST00000357450 ZC3H13Q5T200 1668 aaKnown RBP5.79□□□□□ -1.48
SMC1B-201ENST00000357450 PDCD7Q8N8D1 485 aaKnown RBP5.79□□□□□ -1.48
SMC1B-201ENST00000357450 POLA1P09884 1462 aaPredicted RBP5.79□□□□□ -1.48
SMC1B-201ENST00000357450 WDR62O43379 1518 aa5.79□□□□□ -1.48
SMC1B-201ENST00000357450 SIGLEC1Q9BZZ2 1709 aa5.78□□□□□ -1.48
SMC1B-201ENST00000357450 TCOF1Q13428 1488 aaKnown RBP5.78□□□□□ -1.48
SMC1B-201ENST00000357450 CD44P16070 742 aaKnown RBP5.78□□□□□ -1.48
SMC1B-201ENST00000357450 TOPBP1Q92547 1522 aa5.78□□□□□ -1.48
SMC1B-201ENST00000357450 ATN1P54259 1190 aaPredicted RBP5.78□□□□□ -1.48
SMC1B-201ENST00000357450 CEP170Q5SW79 1584 aa5.77□□□□□ -1.49
SMC1B-201ENST00000357450 ADGBQ8N7X0 1667 aa5.77□□□□□ -1.49
SMC1B-201ENST00000357450 RNF17Q9BXT8 1623 aaKnown RBP5.77□□□□□ -1.49
SMC1B-201ENST00000357450 DHX57Q6P158 1386 aaKnown RBP5.76□□□□□ -1.49
SMC1B-201ENST00000357450 DISP1Q96F81 1524 aa5.76□□□□□ -1.49
SMC1B-201ENST00000357450 IGF1RP08069 1367 aa5.76□□□□□ -1.49
SMC1B-201ENST00000357450 FGD5Q6ZNL6 1462 aa5.76□□□□□ -1.49
SMC1B-201ENST00000357450 VIRMAQ69YN4 1812 aaKnown RBP5.76□□□□□ -1.49
SMC1B-201ENST00000357450 COLQQ9Y215 455 aaPredicted RBP5.75□□□□□ -1.49
SMC1B-201ENST00000357450 ABCA8O94911 1581 aa5.75□□□□□ -1.49
SMC1B-201ENST00000357450 POTEB3A0JP26 581 aa5.75□□□□□ -1.49
SMC1B-201ENST00000357450 POTEBQ6S5H4 581 aa5.75□□□□□ -1.49
SMC1B-201ENST00000357450 RAD54L2Q9Y4B4 1467 aa5.75□□□□□ -1.49
SMC1B-201ENST00000357450 PHF12Q96QT6 1004 aa5.75□□□□□ -1.49
SMC1B-201ENST00000357450 MS4A3Q96HJ5 214 aa5.74□□□□□ -1.49
SMC1B-201ENST00000357450 DEPDC5O75140 1603 aa5.74□□□□□ -1.49
SMC1B-201ENST00000357450 SLC24A1O60721 1099 aa5.74□□□□□ -1.49
SMC1B-201ENST00000357450 DNMT1P26358 1616 aaKnown RBP5.73□□□□□ -1.49
SMC1B-201ENST00000357450 A0A0G2JS52 829 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 MYT1Q01538 1121 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 GGT6Q6P531 493 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 CARMIL2Q6F5E8 1435 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 PRR29P0C7W0 189 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 KIF14Q15058 1648 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 EIF4G3O43432 1585 aaKnown RBP5.73□□□□□ -1.49
SMC1B-201ENST00000357450 LRRC9Q6ZRR7 1453 aa5.73□□□□□ -1.49
SMC1B-201ENST00000357450 PTPRGP23470 1445 aa5.72□□□□□ -1.49
SMC1B-201ENST00000357450 HAX1O00165 279 aa5.72□□□□□ -1.49
SMC1B-201ENST00000357450 PIP4K2BP78356 416 aa5.72□□□□□ -1.49
SMC1B-201ENST00000357450 TRIM26Q12899 539 aaPredicted RBP5.72□□□□□ -1.49
SMC1B-201ENST00000357450 MROH1Q8NDA8 1641 aa5.72□□□□□ -1.49
SMC1B-201ENST00000357450 FAM50AQ14320 339 aaKnown RBP5.72□□□□□ -1.49
SMC1B-201ENST00000357450 PPP1R15AO75807 674 aaPredicted RBP5.72□□□□□ -1.49
SMC1B-201ENST00000357450 PPRC1Q5VV67 1664 aaKnown RBP5.71□□□□□ -1.49
SMC1B-201ENST00000357450 EFCAB5A4FU69 1503 aa5.71□□□□□ -1.5
SMC1B-201ENST00000357450 PCGF6Q9BYE7 350 aa5.71□□□□□ -1.5
SMC1B-201ENST00000357450 TUBGCP6Q96RT7 1819 aa5.71□□□□□ -1.5
SMC1B-201ENST00000357450 SPATA31E1Q6ZUB1 1445 aa5.71□□□□□ -1.5
SMC1B-201ENST00000357450 ARHGEF12Q9NZN5 1544 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 KIAA0556O60303 1618 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 SETD1AO15047 1707 aaKnown RBP5.7□□□□□ -1.5
SMC1B-201ENST00000357450 KDM5DQ9BY66 1539 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 TEX14Q8IWB6 1497 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 KDM5CP41229 1560 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 HAP1P54257 671 aaPredicted RBP5.7□□□□□ -1.5
SMC1B-201ENST00000357450 NCOA2Q15596 1464 aa5.7□□□□□ -1.5
SMC1B-201ENST00000357450 IFT140Q96RY7 1462 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms