RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 EIF4G2P78344 907 aaKnown RBP eCLIP19.97■□□□□ 0.79
TOP3B-201ENST00000357179 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
TOP3B-201ENST00000357179 UBE2Q2Q8WVN8 375 aa19.95■□□□□ 0.78
TOP3B-201ENST00000357179 RRP7BPQ9NSQ0 103 aa19.93■□□□□ 0.78
TOP3B-201ENST00000357179 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
TOP3B-201ENST00000357179 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
TOP3B-201ENST00000357179 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
TOP3B-201ENST00000357179 KDM6BO15054 1643 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
TOP3B-201ENST00000357179 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
TOP3B-201ENST00000357179 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
TOP3B-201ENST00000357179 IQGAP2Q13576 1575 aa19.89■□□□□ 0.78
TOP3B-201ENST00000357179 ROCK1Q13464 1354 aa19.89■□□□□ 0.77
TOP3B-201ENST00000357179 CCDC7Q96M83 1385 aa19.88■□□□□ 0.77
TOP3B-201ENST00000357179 RTN4Q9NQC3 1192 aaKnown RBP19.88■□□□□ 0.77
TOP3B-201ENST00000357179 WDR62O43379 1518 aa19.87■□□□□ 0.77
TOP3B-201ENST00000357179 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
TOP3B-201ENST00000357179 RPRD2Q5VT52 1461 aaKnown RBP19.87■□□□□ 0.77
TOP3B-201ENST00000357179 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
TOP3B-201ENST00000357179 L3MBTL2Q969R5 705 aa19.85■□□□□ 0.77
TOP3B-201ENST00000357179 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
TOP3B-201ENST00000357179 POLR1AO95602 1720 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 C11orf95C9JLR9 678 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
TOP3B-201ENST00000357179 ANKRD30BQ9BXX2 1392 aa19.84■□□□□ 0.77
TOP3B-201ENST00000357179 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.83■□□□□ 0.77
TOP3B-201ENST00000357179 TEX14Q8IWB6 1497 aa19.83■□□□□ 0.76
TOP3B-201ENST00000357179 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
TOP3B-201ENST00000357179 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
TOP3B-201ENST00000357179 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
TOP3B-201ENST00000357179 DAPK1P53355 1430 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
TOP3B-201ENST00000357179 SPATA31E1Q6ZUB1 1445 aa19.8■□□□□ 0.76
TOP3B-201ENST00000357179 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
TOP3B-201ENST00000357179 RNF123Q5XPI4 1314 aa19.77■□□□□ 0.75
TOP3B-201ENST00000357179 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
TOP3B-201ENST00000357179 ABCC5O15440 1437 aa19.76■□□□□ 0.75
TOP3B-201ENST00000357179 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
TOP3B-201ENST00000357179 NBPF8Q3BBV2 869 aa19.74■□□□□ 0.75
TOP3B-201ENST00000357179 KIF7Q2M1P5 1343 aa19.72■□□□□ 0.75
TOP3B-201ENST00000357179 NEFMP07197 916 aa19.72■□□□□ 0.75
TOP3B-201ENST00000357179 FOXD1Q16676 465 aa19.7■□□□□ 0.74
TOP3B-201ENST00000357179 KIAA0556O60303 1618 aa19.68■□□□□ 0.74
TOP3B-201ENST00000357179 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
TOP3B-201ENST00000357179 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
TOP3B-201ENST00000357179 NUDCQ9Y266 331 aa19.66■□□□□ 0.74
TOP3B-201ENST00000357179 PZPP20742 1482 aa19.66■□□□□ 0.74
TOP3B-201ENST00000357179 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
TOP3B-201ENST00000357179 KIAA0586Q9BVV6 1533 aa19.65■□□□□ 0.74
TOP3B-201ENST00000357179 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
TOP3B-201ENST00000357179 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
TOP3B-201ENST00000357179 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
TOP3B-201ENST00000357179 DISP1Q96F81 1524 aa19.64■□□□□ 0.74
TOP3B-201ENST00000357179 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.74
TOP3B-201ENST00000357179 ADGBQ8N7X0 1667 aa19.64■□□□□ 0.73
TOP3B-201ENST00000357179 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
TOP3B-201ENST00000357179 ADGRL2O95490 1459 aa19.62■□□□□ 0.73
TOP3B-201ENST00000357179 ITSN2Q9NZM3 1697 aa19.61■□□□□ 0.73
TOP3B-201ENST00000357179 MRC2Q9UBG0 1479 aa19.61■□□□□ 0.73
TOP3B-201ENST00000357179 KIF14Q15058 1648 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 BRPF3Q9ULD4 1205 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
TOP3B-201ENST00000357179 NPM2Q86SE8 214 aaKnown RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
TOP3B-201ENST00000357179 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
TOP3B-201ENST00000357179 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
TOP3B-201ENST00000357179 CROCC2H7BZ55 1655 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 IFT140Q96RY7 1462 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
TOP3B-201ENST00000357179 KDM5CP41229 1560 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 USP47Q96K76 1375 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 GSE1Q14687 1217 aa19.56■□□□□ 0.72
TOP3B-201ENST00000357179 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
TOP3B-201ENST00000357179 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
TOP3B-201ENST00000357179 PDE4AP27815 886 aa19.54■□□□□ 0.72
TOP3B-201ENST00000357179 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
TOP3B-201ENST00000357179 BACH2Q9BYV9 841 aa19.53■□□□□ 0.72
TOP3B-201ENST00000357179 EIF5BO60841 1220 aaKnown RBP19.53■□□□□ 0.72
TOP3B-201ENST00000357179 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
TOP3B-201ENST00000357179 RALGAPBQ86X10 1494 aa19.51■□□□□ 0.71
TOP3B-201ENST00000357179 MS4A1P11836 297 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 CFDP1Q9UEE9 299 aaPredicted RBP19.5■□□□□ 0.71
TOP3B-201ENST00000357179 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
TOP3B-201ENST00000357179 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
TOP3B-201ENST00000357179 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
TOP3B-201ENST00000357179 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
TOP3B-201ENST00000357179 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 SHANK2Q9UPX8 1470 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 PKD2Q13563 968 aa19.46■□□□□ 0.71
TOP3B-201ENST00000357179 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
TOP3B-201ENST00000357179 KDM5DQ9BY66 1539 aa19.45■□□□□ 0.7
TOP3B-201ENST00000357179 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
TOP3B-201ENST00000357179 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms