RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 BCL11BQ9C0K0 894 aaPredicted RBP9.99□□□□□ -0.81
VANGL1-202ENST00000355485 PDE4AP27815 886 aa9.99□□□□□ -0.81
VANGL1-202ENST00000355485 CARD11Q9BXL7 1154 aa9.99□□□□□ -0.81
VANGL1-202ENST00000355485 RCAN3Q9UKA8 241 aa9.98□□□□□ -0.81
VANGL1-202ENST00000355485 GBP4Q96PP9 640 aa9.97□□□□□ -0.81
VANGL1-202ENST00000355485 RBM10P98175 930 aaKnown RBP9.96□□□□□ -0.81
VANGL1-202ENST00000355485 GOLGA3Q08378 1498 aa9.96□□□□□ -0.81
VANGL1-202ENST00000355485 PAK3O75914 559 aaPredicted RBP9.96□□□□□ -0.82
VANGL1-202ENST00000355485 NAP1L2Q9ULW6 460 aaPredicted RBP9.96□□□□□ -0.82
VANGL1-202ENST00000355485 APBB1O00213 710 aa9.96□□□□□ -0.82
VANGL1-202ENST00000355485 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
VANGL1-202ENST00000355485 PLIN1O60240 522 aa9.95□□□□□ -0.82
VANGL1-202ENST00000355485 EXOC6Q8TAG9 804 aa9.95□□□□□ -0.82
VANGL1-202ENST00000355485 NOL8Q76FK4 1167 aaKnown RBP9.94□□□□□ -0.82
VANGL1-202ENST00000355485 NOC3LQ8WTT2 800 aaKnown RBP9.94□□□□□ -0.82
VANGL1-202ENST00000355485 NUDCQ9Y266 331 aa9.94□□□□□ -0.82
VANGL1-202ENST00000355485 KNSTRNQ9Y448 316 aa9.94□□□□□ -0.82
VANGL1-202ENST00000355485 AEBP2Q6ZN18 517 aaPredicted RBP9.93□□□□□ -0.82
VANGL1-202ENST00000355485 USP35Q9P2H5 1018 aa9.93□□□□□ -0.82
VANGL1-202ENST00000355485 GOLGA6L4A6NEF3 574 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 PTMSP20962 102 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 G3V3G9 751 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 MTUS2Q5JR59 1369 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
VANGL1-202ENST00000355485 MSH5O43196 834 aa9.91□□□□□ -0.82
VANGL1-202ENST00000355485 R3HCC1Q9Y3T6 440 aaKnown RBP9.91□□□□□ -0.82
VANGL1-202ENST00000355485 FGD1P98174 961 aa9.91□□□□□ -0.82
VANGL1-202ENST00000355485 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
VANGL1-202ENST00000355485 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.82
VANGL1-202ENST00000355485 FOXD4L6Q3SYB3 417 aaPredicted RBP9.9□□□□□ -0.83
VANGL1-202ENST00000355485 FOXD4L3Q6VB84 417 aaPredicted RBP9.9□□□□□ -0.83
VANGL1-202ENST00000355485 MAPK8IP2Q13387 824 aaPredicted RBP9.89□□□□□ -0.83
VANGL1-202ENST00000355485 LMOD2Q6P5Q4 547 aa9.89□□□□□ -0.83
VANGL1-202ENST00000355485 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
VANGL1-202ENST00000355485 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
VANGL1-202ENST00000355485 RB1CC1Q8TDY2 1594 aa9.88□□□□□ -0.83
VANGL1-202ENST00000355485 U2SURPO15042 1029 aaKnown RBP9.88□□□□□ -0.83
VANGL1-202ENST00000355485 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
VANGL1-202ENST00000355485 CCDC146Q8IYE0 955 aa9.86□□□□□ -0.83
VANGL1-202ENST00000355485 CFAP53Q96M91 514 aa9.86□□□□□ -0.83
VANGL1-202ENST00000355485 KCNJ4P48050 445 aa9.86□□□□□ -0.83
VANGL1-202ENST00000355485 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
VANGL1-202ENST00000355485 MAPK8IP3Q9UPT6 1336 aa9.85□□□□□ -0.83
VANGL1-202ENST00000355485 CEP89Q96ST8 783 aa9.85□□□□□ -0.83
VANGL1-202ENST00000355485 ITPRIPQ8IWB1 547 aa9.85□□□□□ -0.83
VANGL1-202ENST00000355485 FAM43AQ8N2R8 423 aa9.85□□□□□ -0.83
VANGL1-202ENST00000355485 CLUAP1Q96AJ1 413 aa9.85□□□□□ -0.83
VANGL1-202ENST00000355485 DDX49Q9Y6V7 483 aaKnown RBP9.85□□□□□ -0.83
VANGL1-202ENST00000355485 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
VANGL1-202ENST00000355485 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
VANGL1-202ENST00000355485 CWC22Q9HCG8 908 aaKnown RBP9.84□□□□□ -0.83
VANGL1-202ENST00000355485 OS9Q13438 667 aaPredicted RBP9.84□□□□□ -0.83
VANGL1-202ENST00000355485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.84□□□□□ -0.83
VANGL1-202ENST00000355485 NACADO15069 1562 aa9.83□□□□□ -0.84
VANGL1-202ENST00000355485 DDX11L8A8MPP1 907 aa9.83□□□□□ -0.84
VANGL1-202ENST00000355485 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
VANGL1-202ENST00000355485 GNL2Q13823 731 aaKnown RBP9.82□□□□□ -0.84
VANGL1-202ENST00000355485 PRDM10Q9NQV6 1147 aa9.82□□□□□ -0.84
VANGL1-202ENST00000355485 RWDD1Q9H446 243 aaPredicted RBP9.81□□□□□ -0.84
VANGL1-202ENST00000355485 TSPY4P0CV99 314 aa9.81□□□□□ -0.84
VANGL1-202ENST00000355485 TSPY10P0CW01 314 aa9.81□□□□□ -0.84
VANGL1-202ENST00000355485 MCCP23508 829 aa9.81□□□□□ -0.84
VANGL1-202ENST00000355485 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
VANGL1-202ENST00000355485 CHMP4BQ9H444 224 aaKnown RBP9.81□□□□□ -0.84
VANGL1-202ENST00000355485 PATL2C9JE40 543 aaKnown RBP9.81□□□□□ -0.84
VANGL1-202ENST00000355485 RRP1P56182 461 aaKnown RBP9.81□□□□□ -0.84
VANGL1-202ENST00000355485 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
VANGL1-202ENST00000355485 HSP90B1P14625 803 aaKnown RBP9.8□□□□□ -0.84
VANGL1-202ENST00000355485 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 SYAP1Q96A49 352 aaPredicted RBP9.79□□□□□ -0.84
VANGL1-202ENST00000355485 CCDC34Q96HJ3 373 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 TCEAL9Q9UHQ7 104 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 CCNB3Q8WWL7 1395 aa9.79□□□□□ -0.84
VANGL1-202ENST00000355485 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
VANGL1-202ENST00000355485 CCAR2Q8N163 923 aaKnown RBP9.78□□□□□ -0.84
VANGL1-202ENST00000355485 GOLGA6L1Q8N7Z2 621 aa9.78□□□□□ -0.84
VANGL1-202ENST00000355485 APPP05067 770 aa9.78□□□□□ -0.84
VANGL1-202ENST00000355485 MS4A1P11836 297 aa9.78□□□□□ -0.84
VANGL1-202ENST00000355485 PDE4CQ08493 712 aa9.78□□□□□ -0.84
VANGL1-202ENST00000355485 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.84
VANGL1-202ENST00000355485 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.84
VANGL1-202ENST00000355485 CCDC9Q9Y3X0 531 aaKnown RBP9.77□□□□□ -0.85
VANGL1-202ENST00000355485 CTDP1Q9Y5B0 961 aaPredicted RBP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 WRNQ14191 1432 aaPredicted RBP eCLIP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 KTN1Q86UP2 1357 aaKnown RBP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 CENPQQ7L2Z9 268 aaPredicted RBP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
VANGL1-202ENST00000355485 PHF23Q9BUL5 403 aaPredicted RBP9.76□□□□□ -0.85
VANGL1-202ENST00000355485 SETQ01105 290 aaPredicted RBP9.75□□□□□ -0.85
VANGL1-202ENST00000355485 MCTP1Q6DN14 999 aa9.75□□□□□ -0.85
VANGL1-202ENST00000355485 CHMP7Q8WUX9 453 aaPredicted RBP9.75□□□□□ -0.85
VANGL1-202ENST00000355485 MPNDQ8N594 471 aa9.75□□□□□ -0.85
VANGL1-202ENST00000355485 BCL2L13Q9BXK5 485 aa9.75□□□□□ -0.85
VANGL1-202ENST00000355485 TPM2P07951 284 aa9.75□□□□□ -0.85
VANGL1-202ENST00000355485 TMF1P82094 1093 aa9.75□□□□□ -0.85
VANGL1-202ENST00000355485 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms