RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KDM6BO15054 1643 aa15.66■□□□□ 0.1
CAPN9-202ENST00000354537 SPATA31E1Q6ZUB1 1445 aa15.66■□□□□ 0.1
CAPN9-202ENST00000354537 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
CAPN9-202ENST00000354537 TEX14Q8IWB6 1497 aa15.64■□□□□ 0.09
CAPN9-202ENST00000354537 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
CAPN9-202ENST00000354537 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
CAPN9-202ENST00000354537 WDR62O43379 1518 aa15.63■□□□□ 0.09
CAPN9-202ENST00000354537 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
CAPN9-202ENST00000354537 MRS2Q9HD23 443 aa15.61■□□□□ 0.09
CAPN9-202ENST00000354537 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
CAPN9-202ENST00000354537 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
CAPN9-202ENST00000354537 DAPK1P53355 1430 aa15.61■□□□□ 0.09
CAPN9-202ENST00000354537 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
CAPN9-202ENST00000354537 IRX6P78412 446 aaPredicted RBP15.6■□□□□ 0.09
CAPN9-202ENST00000354537 CCDC184Q52MB2 194 aa15.6■□□□□ 0.09
CAPN9-202ENST00000354537 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
CAPN9-202ENST00000354537 ARID4BQ4LE39 1312 aaPredicted RBP15.6■□□□□ 0.09
CAPN9-202ENST00000354537 KIF7Q2M1P5 1343 aa15.58■□□□□ 0.08
CAPN9-202ENST00000354537 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
CAPN9-202ENST00000354537 ABCC5O15440 1437 aa15.57■□□□□ 0.08
CAPN9-202ENST00000354537 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
CAPN9-202ENST00000354537 FAM9BQ8IZU0 186 aa15.56■□□□□ 0.08
CAPN9-202ENST00000354537 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
CAPN9-202ENST00000354537 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
CAPN9-202ENST00000354537 ADAMTS12P58397 1594 aa15.55■□□□□ 0.08
CAPN9-202ENST00000354537 MBD5Q9P267 1494 aa15.54■□□□□ 0.08
CAPN9-202ENST00000354537 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.07
CAPN9-202ENST00000354537 ROCK2O75116 1388 aaKnown RBP15.5■□□□□ 0.07
CAPN9-202ENST00000354537 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
CAPN9-202ENST00000354537 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
CAPN9-202ENST00000354537 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
CAPN9-202ENST00000354537 PZPP20742 1482 aa15.5■□□□□ 0.07
CAPN9-202ENST00000354537 FOXD1Q16676 465 aa15.48■□□□□ 0.07
CAPN9-202ENST00000354537 ADGRL2O95490 1459 aa15.48■□□□□ 0.07
CAPN9-202ENST00000354537 KIF14Q15058 1648 aa15.47■□□□□ 0.07
CAPN9-202ENST00000354537 KIAA1107Q9UPP5 1409 aa15.47■□□□□ 0.07
CAPN9-202ENST00000354537 KTN1Q86UP2 1357 aaKnown RBP15.47■□□□□ 0.07
CAPN9-202ENST00000354537 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
CAPN9-202ENST00000354537 UHRF1BP1Q6BDS2 1440 aa15.46■□□□□ 0.07
CAPN9-202ENST00000354537 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
CAPN9-202ENST00000354537 KIAA0556O60303 1618 aa15.46■□□□□ 0.06
CAPN9-202ENST00000354537 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
CAPN9-202ENST00000354537 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
CAPN9-202ENST00000354537 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
CAPN9-202ENST00000354537 USP47Q96K76 1375 aa15.44■□□□□ 0.06
CAPN9-202ENST00000354537 KDM5CP41229 1560 aa15.44■□□□□ 0.06
CAPN9-202ENST00000354537 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
CAPN9-202ENST00000354537 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
CAPN9-202ENST00000354537 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
CAPN9-202ENST00000354537 BCORL1Q5H9F3 1711 aa15.42■□□□□ 0.06
CAPN9-202ENST00000354537 ARHGEF12Q9NZN5 1544 aa15.41■□□□□ 0.06
CAPN9-202ENST00000354537 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
CAPN9-202ENST00000354537 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
CAPN9-202ENST00000354537 PNISRQ8TF01 805 aaKnown RBP15.41■□□□□ 0.06
CAPN9-202ENST00000354537 ADCY10Q96PN6 1610 aa15.41■□□□□ 0.06
CAPN9-202ENST00000354537 CROCC2H7BZ55 1655 aa15.4■□□□□ 0.06
CAPN9-202ENST00000354537 LRPPRCP42704 1394 aaKnown RBP15.39■□□□□ 0.05
CAPN9-202ENST00000354537 CCDC136Q96JN2 1154 aa15.39■□□□□ 0.05
CAPN9-202ENST00000354537 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
CAPN9-202ENST00000354537 KIF15Q9NS87 1388 aa15.38■□□□□ 0.05
CAPN9-202ENST00000354537 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
CAPN9-202ENST00000354537 ANKRD30AQ9BXX3 1397 aa15.38■□□□□ 0.05
CAPN9-202ENST00000354537 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
CAPN9-202ENST00000354537 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
CAPN9-202ENST00000354537 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
CAPN9-202ENST00000354537 ANP32AP39687 249 aaKnown RBP15.37■□□□□ 0.05
CAPN9-202ENST00000354537 IPO9Q96P70 1041 aaKnown RBP15.37■□□□□ 0.05
CAPN9-202ENST00000354537 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
CAPN9-202ENST00000354537 RALBP1Q15311 655 aa15.36■□□□□ 0.05
CAPN9-202ENST00000354537 KDM5DQ9BY66 1539 aa15.36■□□□□ 0.05
CAPN9-202ENST00000354537 SHANK2Q9UPX8 1470 aa15.35■□□□□ 0.05
CAPN9-202ENST00000354537 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
CAPN9-202ENST00000354537 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
CAPN9-202ENST00000354537 PKD2Q13563 968 aa15.33■□□□□ 0.04
CAPN9-202ENST00000354537 INSRP06213 1382 aa15.32■□□□□ 0.04
CAPN9-202ENST00000354537 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
CAPN9-202ENST00000354537 ANKRD50Q9ULJ7 1429 aa15.32■□□□□ 0.04
CAPN9-202ENST00000354537 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
CAPN9-202ENST00000354537 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
CAPN9-202ENST00000354537 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
CAPN9-202ENST00000354537 E9PCH4 1651 aa15.3■□□□□ 0.04
CAPN9-202ENST00000354537 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
CAPN9-202ENST00000354537 ZMYM4Q5VZL5 1548 aa15.29■□□□□ 0.04
CAPN9-202ENST00000354537 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
CAPN9-202ENST00000354537 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
CAPN9-202ENST00000354537 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
CAPN9-202ENST00000354537 PTPRGP23470 1445 aa15.28■□□□□ 0.04
CAPN9-202ENST00000354537 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
CAPN9-202ENST00000354537 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
CAPN9-202ENST00000354537 RRP1P56182 461 aaKnown RBP15.27■□□□□ 0.03
CAPN9-202ENST00000354537 MS4A1P11836 297 aa15.26■□□□□ 0.03
CAPN9-202ENST00000354537 WASHC2CQ9Y4E1 1318 aa15.25■□□□□ 0.03
CAPN9-202ENST00000354537 NUP155O75694 1391 aa15.24■□□□□ 0.03
CAPN9-202ENST00000354537 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
CAPN9-202ENST00000354537 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
CAPN9-202ENST00000354537 PARD3Q8TEW0 1356 aa15.23■□□□□ 0.03
CAPN9-202ENST00000354537 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
CAPN9-202ENST00000354537 ZNF326Q5BKZ1 582 aaKnown RBP15.23■□□□□ 0.03
CAPN9-202ENST00000354537 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
CAPN9-202ENST00000354537 POLR3GLQ9BT43 218 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms