RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 EFCAB2Q5VUJ9 269 aa29.91■■■□□ 2.38
VPS72-201ENST00000354473 EHBP1L1Q8N3D4 1523 aa29.9■■■□□ 2.38
VPS72-201ENST00000354473 CDC42BPAQ5VT25 1732 aa29.89■■■□□ 2.38
VPS72-201ENST00000354473 TIAM1Q13009 1591 aa29.87■■■□□ 2.37
VPS72-201ENST00000354473 SCAPERQ9BY12 1400 aa29.86■■■□□ 2.37
VPS72-201ENST00000354473 POGZQ7Z3K3 1410 aa29.82■■■□□ 2.36
VPS72-201ENST00000354473 ZMYM4Q5VZL5 1548 aa29.81■■■□□ 2.36
VPS72-201ENST00000354473 AEBP2Q6ZN18 517 aaPredicted RBP29.79■■■□□ 2.36
VPS72-201ENST00000354473 GPATCH8Q9UKJ3 1502 aaKnown RBP29.79■■■□□ 2.36
VPS72-201ENST00000354473 CCNB3Q8WWL7 1395 aa29.78■■■□□ 2.36
VPS72-201ENST00000354473 ARHGEF40Q8TER5 1519 aa29.78■■■□□ 2.36
VPS72-201ENST00000354473 ABCC1P33527 1531 aa29.76■■■□□ 2.35
VPS72-201ENST00000354473 KDM4FA0A1W2PPD8 638 aa29.75■■■□□ 2.35
VPS72-201ENST00000354473 SUPT6HQ7KZ85 1726 aaKnown RBP29.75■■■□□ 2.35
VPS72-201ENST00000354473 MAP3K1Q13233 1512 aa29.73■■■□□ 2.35
VPS72-201ENST00000354473 ZNF518AQ6AHZ1 1483 aa29.73■■■□□ 2.35
VPS72-201ENST00000354473 LRRC9Q6ZRR7 1453 aa29.72■■■□□ 2.35
VPS72-201ENST00000354473 ZFYVE16Q7Z3T8 1539 aa29.72■■■□□ 2.35
VPS72-201ENST00000354473 ITSN2Q9NZM3 1697 aa29.72■■■□□ 2.35
VPS72-201ENST00000354473 SAMD9LQ8IVG5 1584 aa29.71■■■□□ 2.35
VPS72-201ENST00000354473 MAGI2Q86UL8 1455 aa29.7■■■□□ 2.35
VPS72-201ENST00000354473 ZNF777Q9ULD5 760 aaPredicted RBP29.7■■■□□ 2.34
VPS72-201ENST00000354473 NCOA2Q15596 1464 aa29.69■■■□□ 2.34
VPS72-201ENST00000354473 KDM5CP41229 1560 aa29.69■■■□□ 2.34
VPS72-201ENST00000354473 ARHGEF12Q9NZN5 1544 aa29.69■■■□□ 2.34
VPS72-201ENST00000354473 CFDP1Q9UEE9 299 aaPredicted RBP29.69■■■□□ 2.34
VPS72-201ENST00000354473 YEATS2Q9ULM3 1422 aa29.68■■■□□ 2.34
VPS72-201ENST00000354473 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
VPS72-201ENST00000354473 SYCP2Q9BX26 1530 aa29.65■■■□□ 2.34
VPS72-201ENST00000354473 TRAPPC8Q9Y2L5 1435 aa29.64■■■□□ 2.34
VPS72-201ENST00000354473 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
VPS72-201ENST00000354473 HECW2Q9P2P5 1572 aa29.62■■■□□ 2.33
VPS72-201ENST00000354473 APLP2Q06481 763 aa29.61■■■□□ 2.33
VPS72-201ENST00000354473 PLEKHH2Q8IVE3 1493 aa29.6■■■□□ 2.33
VPS72-201ENST00000354473 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.33
VPS72-201ENST00000354473 KIAA1107Q9UPP5 1409 aa29.57■■■□□ 2.32
VPS72-201ENST00000354473 SIGLEC1Q9BZZ2 1709 aa29.56■■■□□ 2.32
VPS72-201ENST00000354473 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
VPS72-201ENST00000354473 HNRNPMP52272 730 aaKnown RBP eCLIP29.55■■■□□ 2.32
VPS72-201ENST00000354473 MYT1LQ9UL68 1186 aa29.55■■■□□ 2.32
VPS72-201ENST00000354473 ATP10AO60312 1499 aa29.55■■■□□ 2.32
VPS72-201ENST00000354473 BCORL1Q5H9F3 1711 aa29.54■■■□□ 2.32
VPS72-201ENST00000354473 ZNF644Q9H582 1327 aaPredicted RBP29.54■■■□□ 2.32
VPS72-201ENST00000354473 DIP2CQ9Y2E4 1556 aa29.52■■■□□ 2.32
VPS72-201ENST00000354473 C9orf84Q5VXU9 1444 aa29.52■■■□□ 2.32
VPS72-201ENST00000354473 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
VPS72-201ENST00000354473 ADAMTSL3P82987 1691 aa29.51■■■□□ 2.31
VPS72-201ENST00000354473 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.31
VPS72-201ENST00000354473 CAMSAP2Q08AD1 1489 aa29.49■■■□□ 2.31
VPS72-201ENST00000354473 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.31
VPS72-201ENST00000354473 MBD5Q9P267 1494 aa29.45■■■□□ 2.31
VPS72-201ENST00000354473 MYOM3Q5VTT5 1437 aa29.45■■■□□ 2.3
VPS72-201ENST00000354473 MADDQ8WXG6 1647 aa29.44■■■□□ 2.3
VPS72-201ENST00000354473 INO80Q9ULG1 1556 aaPredicted RBP29.44■■■□□ 2.3
VPS72-201ENST00000354473 ATP7AQ04656 1500 aa29.44■■■□□ 2.3
VPS72-201ENST00000354473 REREQ9P2R6 1566 aa29.43■■■□□ 2.3
VPS72-201ENST00000354473 CCDC141Q6ZP82 1450 aa29.38■■■□□ 2.29
VPS72-201ENST00000354473 MIA2Q96PC5 1412 aa29.38■■■□□ 2.29
VPS72-201ENST00000354473 RIMS1Q86UR5 1692 aaKnown RBP29.36■■■□□ 2.29
VPS72-201ENST00000354473 MLECQ14165 292 aa29.36■■■□□ 2.29
VPS72-201ENST00000354473 ARHGEF5Q12774 1597 aa29.35■■■□□ 2.29
VPS72-201ENST00000354473 PTPRMP28827 1452 aa29.34■■■□□ 2.29
VPS72-201ENST00000354473 FER1L4A9Z1Z3 1794 aa29.33■■■□□ 2.29
VPS72-201ENST00000354473 AGLP35573 1532 aa29.32■■■□□ 2.28
VPS72-201ENST00000354473 ADGBQ8N7X0 1667 aa29.29■■■□□ 2.28
VPS72-201ENST00000354473 RSPH4AQ5TD94 716 aa29.29■■■□□ 2.28
VPS72-201ENST00000354473 RTEL1-TNFRSF6BF6WH68 1400 aa29.29■■■□□ 2.28
VPS72-201ENST00000354473 PTPN23Q9H3S7 1636 aa29.28■■■□□ 2.28
VPS72-201ENST00000354473 A2MP01023 1474 aa29.27■■■□□ 2.28
VPS72-201ENST00000354473 PLXNC1O60486 1568 aa29.27■■■□□ 2.28
VPS72-201ENST00000354473 FGD6Q6ZV73 1430 aa29.26■■■□□ 2.28
VPS72-201ENST00000354473 TSPY4P0CV99 314 aa29.2■■■□□ 2.27
VPS72-201ENST00000354473 TSPY10P0CW01 314 aa29.2■■■□□ 2.27
VPS72-201ENST00000354473 MAST1Q9Y2H9 1570 aa29.2■■■□□ 2.26
VPS72-201ENST00000354473 TCOF1Q13428 1488 aaKnown RBP29.2■■■□□ 2.26
VPS72-201ENST00000354473 CROCC2H7BZ55 1655 aa29.16■■■□□ 2.26
VPS72-201ENST00000354473 PLPPR3Q6T4P5 718 aa29.15■■■□□ 2.26
VPS72-201ENST00000354473 DNMT1P26358 1616 aaKnown RBP29.14■■■□□ 2.25
VPS72-201ENST00000354473 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
VPS72-201ENST00000354473 ABCC5O15440 1437 aa29.11■■■□□ 2.25
VPS72-201ENST00000354473 PPARGC1BQ86YN6 1023 aaKnown RBP29.11■■■□□ 2.25
VPS72-201ENST00000354473 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
VPS72-201ENST00000354473 DAPK1P53355 1430 aa29.1■■■□□ 2.25
VPS72-201ENST00000354473 ESF1Q9H501 851 aaKnown RBP29.1■■■□□ 2.25
VPS72-201ENST00000354473 CNTLNQ9NXG0 1405 aa29.07■■■□□ 2.24
VPS72-201ENST00000354473 FAM50AQ14320 339 aaKnown RBP29.05■■■□□ 2.24
VPS72-201ENST00000354473 GGT6Q6P531 493 aa29.05■■■□□ 2.24
VPS72-201ENST00000354473 C3P01024 1663 aa29.05■■■□□ 2.24
VPS72-201ENST00000354473 CEBPAP49715 358 aaPredicted RBP29.04■■■□□ 2.24
VPS72-201ENST00000354473 MROH2AA6NES4 1674 aa29.03■■■□□ 2.24
VPS72-201ENST00000354473 CLTCQ00610 1675 aaKnown RBP29.03■■■□□ 2.24
VPS72-201ENST00000354473 KIF3BO15066 747 aa29.01■■■□□ 2.23
VPS72-201ENST00000354473 DUOX2Q9NRD8 1548 aa28.99■■■□□ 2.23
VPS72-201ENST00000354473 KIF15Q9NS87 1388 aa28.98■■■□□ 2.23
VPS72-201ENST00000354473 LMTK3Q96Q04 1460 aa28.98■■■□□ 2.23
VPS72-201ENST00000354473 EIF2AK4Q9P2K8 1649 aaKnown RBP28.98■■■□□ 2.23
VPS72-201ENST00000354473 PPP6R1Q9UPN7 881 aa28.95■■■□□ 2.23
VPS72-201ENST00000354473 PREX1Q8TCU6 1659 aa28.95■■■□□ 2.22
VPS72-201ENST00000354473 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.22
VPS72-201ENST00000354473 RRP7BPQ9NSQ0 103 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms