RNA–Protein interactions for RNA: ENST00000352591.9

CEACAM1-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 3,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-203ENST00000352591 CARMIL2Q6F5E8 1435 aa9.36□□□□□ -0.91
CEACAM1-203ENST00000352591 ABCA8O94911 1581 aa9.36□□□□□ -0.91
CEACAM1-203ENST00000352591 PRG4Q92954 1404 aaPredicted RBP9.35□□□□□ -0.91
CEACAM1-203ENST00000352591 AKNAQ7Z591 1439 aa9.35□□□□□ -0.91
CEACAM1-203ENST00000352591 DNMT1P26358 1616 aaKnown RBP9.35□□□□□ -0.91
CEACAM1-203ENST00000352591 TROQ12816 1431 aaPredicted RBP9.35□□□□□ -0.91
CEACAM1-203ENST00000352591 IRX6P78412 446 aaPredicted RBP9.33□□□□□ -0.92
CEACAM1-203ENST00000352591 ITSN2Q9NZM3 1697 aa9.33□□□□□ -0.92
CEACAM1-203ENST00000352591 DAPK1P53355 1430 aa9.33□□□□□ -0.92
CEACAM1-203ENST00000352591 DENND4BO75064 1496 aaPredicted RBP9.32□□□□□ -0.92
CEACAM1-203ENST00000352591 SHROOM2Q13796 1616 aa9.31□□□□□ -0.92
CEACAM1-203ENST00000352591 ABCC5O15440 1437 aa9.31□□□□□ -0.92
CEACAM1-203ENST00000352591 SLC24A1O60721 1099 aa9.31□□□□□ -0.92
CEACAM1-203ENST00000352591 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
CEACAM1-203ENST00000352591 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 GPATCH8Q9UKJ3 1502 aaKnown RBP9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 CDC42BPAQ5VT25 1732 aa9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 CROCC2H7BZ55 1655 aa9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 ATP10BO94823 1461 aa9.3□□□□□ -0.92
CEACAM1-203ENST00000352591 ROCK1Q13464 1354 aa9.29□□□□□ -0.92
CEACAM1-203ENST00000352591 KDM5BQ9UGL1 1544 aa9.29□□□□□ -0.92
CEACAM1-203ENST00000352591 TIMELESSQ9UNS1 1208 aa9.28□□□□□ -0.92
CEACAM1-203ENST00000352591 ADGBQ8N7X0 1667 aa9.28□□□□□ -0.92
CEACAM1-203ENST00000352591 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
CEACAM1-203ENST00000352591 ABCC10Q5T3U5 1492 aa9.28□□□□□ -0.92
CEACAM1-203ENST00000352591 FKBP8Q14318 412 aa9.28□□□□□ -0.92
CEACAM1-203ENST00000352591 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
CEACAM1-203ENST00000352591 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
CEACAM1-203ENST00000352591 PTPRGP23470 1445 aa9.26□□□□□ -0.93
CEACAM1-203ENST00000352591 ANP32CO43423 234 aa9.25□□□□□ -0.93
CEACAM1-203ENST00000352591 CFDP1Q9UEE9 299 aaPredicted RBP9.25□□□□□ -0.93
CEACAM1-203ENST00000352591 ADGRL2O95490 1459 aa9.24□□□□□ -0.93
CEACAM1-203ENST00000352591 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
CEACAM1-203ENST00000352591 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
CEACAM1-203ENST00000352591 FAM9BQ8IZU0 186 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 NCOA1Q15788 1441 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 MPHOSPH9Q99550 1183 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 PREX2Q70Z35 1606 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 CDC42BPBQ9Y5S2 1711 aa9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
CEACAM1-203ENST00000352591 HNRNPUQ00839 825 aaKnown RBP eCLIP9.21□□□□□ -0.93
CEACAM1-203ENST00000352591 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
CEACAM1-203ENST00000352591 ABCC2Q92887 1545 aa9.21□□□□□ -0.94
CEACAM1-203ENST00000352591 PZPP20742 1482 aa9.21□□□□□ -0.94
CEACAM1-203ENST00000352591 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.94
CEACAM1-203ENST00000352591 SENP3Q9H4L4 574 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-203ENST00000352591 TTC37Q6PGP7 1564 aa9.2□□□□□ -0.94
CEACAM1-203ENST00000352591 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
CEACAM1-203ENST00000352591 NEFLP07196 543 aa9.2□□□□□ -0.94
CEACAM1-203ENST00000352591 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
CEACAM1-203ENST00000352591 ARHGEF5Q12774 1597 aa9.19□□□□□ -0.94
CEACAM1-203ENST00000352591 ANKRD30BQ9BXX2 1392 aa9.19□□□□□ -0.94
CEACAM1-203ENST00000352591 SLC4A1APQ9BWU0 796 aaKnown RBP9.18□□□□□ -0.94
CEACAM1-203ENST00000352591 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.18□□□□□ -0.94
CEACAM1-203ENST00000352591 C9orf84Q5VXU9 1444 aa9.18□□□□□ -0.94
CEACAM1-203ENST00000352591 RPRD2Q5VT52 1461 aaKnown RBP9.17□□□□□ -0.94
CEACAM1-203ENST00000352591 MBD5Q9P267 1494 aa9.17□□□□□ -0.94
CEACAM1-203ENST00000352591 TEX14Q8IWB6 1497 aa9.17□□□□□ -0.94
CEACAM1-203ENST00000352591 ZCCHC11Q5TAX3 1644 aaKnown RBP9.17□□□□□ -0.94
CEACAM1-203ENST00000352591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.944e-8■□□□□ 11.2
CEACAM1-203ENST00000352591 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
CEACAM1-203ENST00000352591 MYT1LQ9UL68 1186 aa9.16□□□□□ -0.94
CEACAM1-203ENST00000352591 MYO5CQ9NQX4 1742 aa9.16□□□□□ -0.94
CEACAM1-203ENST00000352591 ANKRD50Q9ULJ7 1429 aa9.16□□□□□ -0.94
CEACAM1-203ENST00000352591 HSPA5P11021 654 aaKnown RBP9.15□□□□□ -0.95
CEACAM1-203ENST00000352591 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.95
CEACAM1-203ENST00000352591 UHRF1BP1LA0JNW5 1464 aa9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 HNRNPMP52272 730 aaKnown RBP eCLIP9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 RGL3Q3MIN7 710 aa9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 KDM5DQ9BY66 1539 aa9.14□□□□□ -0.95
CEACAM1-203ENST00000352591 ARHGAP5Q13017 1502 aa9.13□□□□□ -0.95
CEACAM1-203ENST00000352591 KIAA1107Q9UPP5 1409 aa9.13□□□□□ -0.95
CEACAM1-203ENST00000352591 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
CEACAM1-203ENST00000352591 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
CEACAM1-203ENST00000352591 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
CEACAM1-203ENST00000352591 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
CEACAM1-203ENST00000352591 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
CEACAM1-203ENST00000352591 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
CEACAM1-203ENST00000352591 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
CEACAM1-203ENST00000352591 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
CEACAM1-203ENST00000352591 NBPF8Q3BBV2 869 aa9.09□□□□□ -0.95
CEACAM1-203ENST00000352591 EIF4G2P78344 907 aaKnown RBP eCLIP9.09□□□□□ -0.95
CEACAM1-203ENST00000352591 PKD2Q13563 968 aa9.09□□□□□ -0.95
CEACAM1-203ENST00000352591 NUP155O75694 1391 aa9.09□□□□□ -0.95
CEACAM1-203ENST00000352591 UNC13BO14795 1591 aa9.08□□□□□ -0.96
CEACAM1-203ENST00000352591 C11orf95C9JLR9 678 aaPredicted RBP9.08□□□□□ -0.96
CEACAM1-203ENST00000352591 ABCC1P33527 1531 aa9.08□□□□□ -0.96
CEACAM1-203ENST00000352591 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
CEACAM1-203ENST00000352591 PLCH2O75038 1416 aa9.07□□□□□ -0.96
CEACAM1-203ENST00000352591 PLEKHH2Q8IVE3 1493 aa9.07□□□□□ -0.96
CEACAM1-203ENST00000352591 WASHC2AQ641Q2 1341 aa9.07□□□□□ -0.96
CEACAM1-203ENST00000352591 POLR1AO95602 1720 aaPredicted RBP9.06□□□□□ -0.96
CEACAM1-203ENST00000352591 RSPH4AQ5TD94 716 aa9.06□□□□□ -0.96
CEACAM1-203ENST00000352591 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
CEACAM1-203ENST00000352591 TSHZ2Q9NRE2 1034 aa9.04□□□□□ -0.96
CEACAM1-203ENST00000352591 IQGAP3Q86VI3 1631 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms