RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
TRAF3-201ENST00000347662 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
TRAF3-201ENST00000347662 SOGA1O94964 1423 aa15.09■□□□□ 0.01
TRAF3-201ENST00000347662 CYB5RLQ6IPT4 315 aa15.08■□□□□ 0
TRAF3-201ENST00000347662 DCAF11Q8TEB1 546 aa15.08■□□□□ 0
TRAF3-201ENST00000347662 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
TRAF3-201ENST00000347662 CDCA8Q53HL2 280 aa15.07■□□□□ 0
TRAF3-201ENST00000347662 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
TRAF3-201ENST00000347662 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
TRAF3-201ENST00000347662 CREBRFQ8IUR6 639 aa15.06■□□□□ 0
TRAF3-201ENST00000347662 KANK1Q14678 1352 aa15.06■□□□□ 0
TRAF3-201ENST00000347662 CEP89Q96ST8 783 aa15.05■□□□□ 0
TRAF3-201ENST00000347662 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ 0
TRAF3-201ENST00000347662 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
TRAF3-201ENST00000347662 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
TRAF3-201ENST00000347662 GOLGA6L1Q8N7Z2 621 aa15.04■□□□□ -0
TRAF3-201ENST00000347662 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
TRAF3-201ENST00000347662 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
TRAF3-201ENST00000347662 ABCC8Q09428 1581 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 G3V3G9 751 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
TRAF3-201ENST00000347662 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
TRAF3-201ENST00000347662 VPS53Q5VIR6 699 aa15.02■□□□□ -0
TRAF3-201ENST00000347662 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
TRAF3-201ENST00000347662 CALRP27797 417 aaKnown RBP15.02■□□□□ -0
TRAF3-201ENST00000347662 RGS3P49796 1198 aa15.02■□□□□ -0
TRAF3-201ENST00000347662 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
TRAF3-201ENST00000347662 ZNF330Q9Y3S2 320 aaPredicted RBP15.01□□□□□ -0.01
TRAF3-201ENST00000347662 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
TRAF3-201ENST00000347662 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
TRAF3-201ENST00000347662 FOXD1Q16676 465 aa15.01□□□□□ -0.01
TRAF3-201ENST00000347662 SMARCA2P51531 1590 aa15□□□□□ -0.01
TRAF3-201ENST00000347662 MIER1Q8N108 512 aa15□□□□□ -0.01
TRAF3-201ENST00000347662 MCCP23508 829 aa14.98□□□□□ -0.01
TRAF3-201ENST00000347662 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
TRAF3-201ENST00000347662 NUTM2DQ5VT03 806 aaPredicted RBP14.97□□□□□ -0.01
TRAF3-201ENST00000347662 NUDCQ9Y266 331 aa14.97□□□□□ -0.01
TRAF3-201ENST00000347662 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.01
TRAF3-201ENST00000347662 RASSF8Q8NHQ8 419 aa14.96□□□□□ -0.01
TRAF3-201ENST00000347662 KIF3BO15066 747 aa14.95□□□□□ -0.02
TRAF3-201ENST00000347662 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
TRAF3-201ENST00000347662 CCDC9Q9Y3X0 531 aaKnown RBP14.95□□□□□ -0.02
TRAF3-201ENST00000347662 WIZO95785 1651 aa14.94□□□□□ -0.02
TRAF3-201ENST00000347662 HNRNPMP52272 730 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■■■□ 21.4
TRAF3-201ENST00000347662 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
TRAF3-201ENST00000347662 NUTM2FA1L443 756 aa14.92□□□□□ -0.02
TRAF3-201ENST00000347662 PKD2Q13563 968 aa14.92□□□□□ -0.02
TRAF3-201ENST00000347662 TPM4P67936 248 aa14.91□□□□□ -0.02
TRAF3-201ENST00000347662 SETQ01105 290 aaPredicted RBP14.91□□□□□ -0.02
TRAF3-201ENST00000347662 APBB1O00213 710 aa14.91□□□□□ -0.02
TRAF3-201ENST00000347662 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
TRAF3-201ENST00000347662 MARCH6O60337 910 aa14.9□□□□□ -0.02
TRAF3-201ENST00000347662 TMF1P82094 1093 aa14.89□□□□□ -0.03
TRAF3-201ENST00000347662 KIAA1211Q6ZU35 1233 aa14.89□□□□□ -0.03
TRAF3-201ENST00000347662 AEBP2Q6ZN18 517 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-201ENST00000347662 PES1O00541 588 aaKnown RBP14.88□□□□□ -0.03
TRAF3-201ENST00000347662 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
TRAF3-201ENST00000347662 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
TRAF3-201ENST00000347662 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
TRAF3-201ENST00000347662 WASHC2CQ9Y4E1 1318 aa14.87□□□□□ -0.03
TRAF3-201ENST00000347662 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
TRAF3-201ENST00000347662 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
TRAF3-201ENST00000347662 GORABQ5T7V8 394 aa14.85□□□□□ -0.03
TRAF3-201ENST00000347662 EID1Q9Y6B2 187 aa14.85□□□□□ -0.03
TRAF3-201ENST00000347662 MORC1Q86VD1 984 aa14.84□□□□□ -0.03
TRAF3-201ENST00000347662 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
TRAF3-201ENST00000347662 NUP155O75694 1391 aa14.84□□□□□ -0.03
TRAF3-201ENST00000347662 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.03
TRAF3-201ENST00000347662 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.03
TRAF3-201ENST00000347662 USP35Q9P2H5 1018 aa14.83□□□□□ -0.04
TRAF3-201ENST00000347662 TPM3P06753 285 aa14.82□□□□□ -0.04
TRAF3-201ENST00000347662 RRP12Q5JTH9 1297 aaKnown RBP14.82□□□□□ -0.04
TRAF3-201ENST00000347662 TCEAL9Q9UHQ7 104 aa14.82□□□□□ -0.04
TRAF3-201ENST00000347662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.81□□□□□ -0.047e-7■■■■■ 73
TRAF3-201ENST00000347662 RTF1Q92541 710 aaKnown RBP14.81□□□□□ -0.04
TRAF3-201ENST00000347662 HDGFL2Q7Z4V5 671 aaPredicted RBP14.8□□□□□ -0.04
TRAF3-201ENST00000347662 CCDC34Q96HJ3 373 aa14.8□□□□□ -0.04
TRAF3-201ENST00000347662 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
TRAF3-201ENST00000347662 FRAT2O75474 233 aaPredicted RBP14.8□□□□□ -0.04
TRAF3-201ENST00000347662 GZF1Q9H116 711 aaPredicted RBP14.79□□□□□ -0.04
TRAF3-201ENST00000347662 FHOD3Q2V2M9 1422 aa14.79□□□□□ -0.04
TRAF3-201ENST00000347662 NGDNQ8NEJ9 315 aaKnown RBP14.78□□□□□ -0.04
TRAF3-201ENST00000347662 TPD52L1Q16890 204 aaPredicted RBP14.78□□□□□ -0.04
TRAF3-201ENST00000347662 SUPT16HQ9Y5B9 1047 aaKnown RBP14.78□□□□□ -0.04
TRAF3-201ENST00000347662 RAD21O60216 631 aa14.77□□□□□ -0.04
TRAF3-201ENST00000347662 MS4A1P11836 297 aa14.77□□□□□ -0.04
TRAF3-201ENST00000347662 TOMM22Q9NS69 142 aa14.77□□□□□ -0.04
TRAF3-201ENST00000347662 PTMSP20962 102 aa14.77□□□□□ -0.05
TRAF3-201ENST00000347662 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.05
TRAF3-201ENST00000347662 NOP58Q9Y2X3 529 aaKnown RBP14.77□□□□□ -0.05
TRAF3-201ENST00000347662 FMN1Q68DA7 1419 aa14.77□□□□□ -0.05
TRAF3-201ENST00000347662 CCAR2Q8N163 923 aaKnown RBP14.77□□□□□ -0.05
TRAF3-201ENST00000347662 LTV1Q96GA3 475 aaPredicted RBP14.76□□□□□ -0.05
TRAF3-201ENST00000347662 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
TRAF3-201ENST00000347662 FANCD2Q9BXW9 1451 aa14.75□□□□□ -0.05
TRAF3-201ENST00000347662 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
TRAF3-201ENST00000347662 MPHOSPH9Q99550 1183 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms