RNA–Protein interactions for RNA: ENST00000346403.10

SNRPN-201, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-201ENST00000346403 ZMYM4Q5VZL5 1548 aa25.33■■□□□ 1.64
SNRPN-201ENST00000346403 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
SNRPN-201ENST00000346403 MAGI2Q86UL8 1455 aa25.32■■□□□ 1.64
SNRPN-201ENST00000346403 ARHGEF40Q8TER5 1519 aa25.32■■□□□ 1.64
SNRPN-201ENST00000346403 ZFYVE16Q7Z3T8 1539 aa25.29■■□□□ 1.64
SNRPN-201ENST00000346403 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
SNRPN-201ENST00000346403 ZNF518AQ6AHZ1 1483 aa25.24■■□□□ 1.63
SNRPN-201ENST00000346403 YEATS2Q9ULM3 1422 aa25.24■■□□□ 1.63
SNRPN-201ENST00000346403 MTUS2Q5JR59 1369 aa25.24■■□□□ 1.63
SNRPN-201ENST00000346403 PREX2Q70Z35 1606 aa25.24■■□□□ 1.63
SNRPN-201ENST00000346403 CDC42BPBQ9Y5S2 1711 aa25.22■■□□□ 1.63
SNRPN-201ENST00000346403 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.62
SNRPN-201ENST00000346403 AFAP1Q8N556 730 aa25.19■■□□□ 1.62
SNRPN-201ENST00000346403 BCORL1Q5H9F3 1711 aa25.19■■□□□ 1.62
SNRPN-201ENST00000346403 MYT1LQ9UL68 1186 aa25.17■■□□□ 1.62
SNRPN-201ENST00000346403 CCNB3Q8WWL7 1395 aa25.16■■□□□ 1.62
SNRPN-201ENST00000346403 ATP10AO60312 1499 aa25.16■■□□□ 1.62
SNRPN-201ENST00000346403 ABCC1P33527 1531 aa25.16■■□□□ 1.62
SNRPN-201ENST00000346403 GPATCH8Q9UKJ3 1502 aaKnown RBP25.16■■□□□ 1.62
SNRPN-201ENST00000346403 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
SNRPN-201ENST00000346403 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
SNRPN-201ENST00000346403 KDM5CP41229 1560 aa25.15■■□□□ 1.62
SNRPN-201ENST00000346403 PTPRMP28827 1452 aa25.14■■□□□ 1.62
SNRPN-201ENST00000346403 EHBP1L1Q8N3D4 1523 aa25.13■■□□□ 1.61
SNRPN-201ENST00000346403 C9orf84Q5VXU9 1444 aa25.13■■□□□ 1.61
SNRPN-201ENST00000346403 CFDP1Q9UEE9 299 aaPredicted RBP25.12■■□□□ 1.61
SNRPN-201ENST00000346403 TRAPPC8Q9Y2L5 1435 aa25.11■■□□□ 1.61
SNRPN-201ENST00000346403 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
SNRPN-201ENST00000346403 ARHGEF12Q9NZN5 1544 aa25.11■■□□□ 1.61
SNRPN-201ENST00000346403 HECW2Q9P2P5 1572 aa25.11■■□□□ 1.61
SNRPN-201ENST00000346403 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
SNRPN-201ENST00000346403 MLH3Q9UHC1 1453 aa25.1■■□□□ 1.61
SNRPN-201ENST00000346403 ITSN2Q9NZM3 1697 aa25.08■■□□□ 1.61
SNRPN-201ENST00000346403 PLEKHH2Q8IVE3 1493 aa25.08■■□□□ 1.61
SNRPN-201ENST00000346403 MLECQ14165 292 aa25.08■■□□□ 1.6
SNRPN-201ENST00000346403 SAMD9LQ8IVG5 1584 aa25.06■■□□□ 1.6
SNRPN-201ENST00000346403 SIGLEC1Q9BZZ2 1709 aa25.05■■□□□ 1.6
SNRPN-201ENST00000346403 KIAA1107Q9UPP5 1409 aa25.05■■□□□ 1.6
SNRPN-201ENST00000346403 SYCP2Q9BX26 1530 aa25.03■■□□□ 1.6
SNRPN-201ENST00000346403 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
SNRPN-201ENST00000346403 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.66e-7■□□□□ 9.7
SNRPN-201ENST00000346403 RIMS1Q86UR5 1692 aaKnown RBP25.01■■□□□ 1.59
SNRPN-201ENST00000346403 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
SNRPN-201ENST00000346403 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
SNRPN-201ENST00000346403 REREQ9P2R6 1566 aa25■■□□□ 1.59
SNRPN-201ENST00000346403 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
SNRPN-201ENST00000346403 SUPT6HQ7KZ85 1726 aaKnown RBP24.97■■□□□ 1.59
SNRPN-201ENST00000346403 NCOA2Q15596 1464 aa24.97■■□□□ 1.59
SNRPN-201ENST00000346403 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
SNRPN-201ENST00000346403 PLPPR3Q6T4P5 718 aa24.94■■□□□ 1.58
SNRPN-201ENST00000346403 FER1L4A9Z1Z3 1794 aa24.94■■□□□ 1.58
SNRPN-201ENST00000346403 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
SNRPN-201ENST00000346403 ZNF644Q9H582 1327 aaPredicted RBP24.94■■□□□ 1.58
SNRPN-201ENST00000346403 AGLP35573 1532 aa24.93■■□□□ 1.58
SNRPN-201ENST00000346403 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
SNRPN-201ENST00000346403 ATP7AQ04656 1500 aa24.9■■□□□ 1.58
SNRPN-201ENST00000346403 ESF1Q9H501 851 aaKnown RBP24.89■■□□□ 1.58
SNRPN-201ENST00000346403 APLP2Q06481 763 aa24.88■■□□□ 1.57
SNRPN-201ENST00000346403 MBD5Q9P267 1494 aa24.88■■□□□ 1.57
SNRPN-201ENST00000346403 INO80Q9ULG1 1556 aaPredicted RBP24.86■■□□□ 1.57
SNRPN-201ENST00000346403 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
SNRPN-201ENST00000346403 KANK4Q5T7N3 995 aaPredicted RBP24.85■■□□□ 1.57
SNRPN-201ENST00000346403 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
SNRPN-201ENST00000346403 LMTK3Q96Q04 1460 aa24.85■■□□□ 1.57
SNRPN-201ENST00000346403 A2MP01023 1474 aa24.82■■□□□ 1.56
SNRPN-201ENST00000346403 RTEL1-TNFRSF6BF6WH68 1400 aa24.81■■□□□ 1.56
SNRPN-201ENST00000346403 CCDC141Q6ZP82 1450 aa24.81■■□□□ 1.56
SNRPN-201ENST00000346403 CEBPAP49715 358 aaPredicted RBP24.81■■□□□ 1.56
SNRPN-201ENST00000346403 CNTLNQ9NXG0 1405 aa24.8■■□□□ 1.56
SNRPN-201ENST00000346403 PLXNC1O60486 1568 aa24.77■■□□□ 1.56
SNRPN-201ENST00000346403 MYOM3Q5VTT5 1437 aa24.75■■□□□ 1.55
SNRPN-201ENST00000346403 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
SNRPN-201ENST00000346403 TSPY4P0CV99 314 aa24.75■■□□□ 1.55
SNRPN-201ENST00000346403 TSPY10P0CW01 314 aa24.75■■□□□ 1.55
SNRPN-201ENST00000346403 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
SNRPN-201ENST00000346403 ARHGEF5Q12774 1597 aa24.73■■□□□ 1.55
SNRPN-201ENST00000346403 HSPA2P54652 639 aa24.73■■□□□ 1.55
SNRPN-201ENST00000346403 GGT6Q6P531 493 aa24.71■■□□□ 1.55
SNRPN-201ENST00000346403 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
SNRPN-201ENST00000346403 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
SNRPN-201ENST00000346403 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
SNRPN-201ENST00000346403 UHRF1BP1Q6BDS2 1440 aa24.68■■□□□ 1.54
SNRPN-201ENST00000346403 C3P01024 1663 aa24.68■■□□□ 1.54
SNRPN-201ENST00000346403 ZMYM3Q14202 1370 aa24.65■■□□□ 1.54
SNRPN-201ENST00000346403 SETD1BQ9UPS6 1966 aaKnown RBP24.65■■□□□ 1.54
SNRPN-201ENST00000346403 MROH2AA6NES4 1674 aa24.65■■□□□ 1.54
SNRPN-201ENST00000346403 KIF3BO15066 747 aa24.62■■□□□ 1.53
SNRPN-201ENST00000346403 NPATQ14207 1427 aa24.62■■□□□ 1.53
SNRPN-201ENST00000346403 MAST1Q9Y2H9 1570 aa24.59■■□□□ 1.53
SNRPN-201ENST00000346403 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
SNRPN-201ENST00000346403 FGD6Q6ZV73 1430 aa24.56■■□□□ 1.52
SNRPN-201ENST00000346403 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
SNRPN-201ENST00000346403 FAM135AQ9P2D6 1515 aa24.54■■□□□ 1.52
SNRPN-201ENST00000346403 PTPRKQ15262 1439 aa24.53■■□□□ 1.52
SNRPN-201ENST00000346403 WASHC2CQ9Y4E1 1318 aa24.53■■□□□ 1.52
SNRPN-201ENST00000346403 DMRT2Q9Y5R5 561 aa24.53■■□□□ 1.52
SNRPN-201ENST00000346403 TCOF1Q13428 1488 aaKnown RBP24.51■■□□□ 1.51
SNRPN-201ENST00000346403 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
SNRPN-201ENST00000346403 ILDR1Q86SU0 546 aaPredicted RBP24.51■■□□□ 1.51
SNRPN-201ENST00000346403 KDM5DQ9BY66 1539 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms