RNA–Protein interactions for RNA: ENST00000345239.6

GFM2-202, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 1 (best) BASIC

Gene GFM2, Length 2,856 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-202ENST00000345239 ADGBQ8N7X0 1667 aa14.01□□□□□ -0.17
GFM2-202ENST00000345239 SAMD9LQ8IVG5 1584 aa14.01□□□□□ -0.17
GFM2-202ENST00000345239 TTBK1Q5TCY1 1321 aaPredicted RBP14.01□□□□□ -0.17
GFM2-202ENST00000345239 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
GFM2-202ENST00000345239 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
GFM2-202ENST00000345239 PLEKHH2Q8IVE3 1493 aa14□□□□□ -0.17
GFM2-202ENST00000345239 DIP2BQ9P265 1576 aa14□□□□□ -0.17
GFM2-202ENST00000345239 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
GFM2-202ENST00000345239 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
GFM2-202ENST00000345239 PLCH2O75038 1416 aa14□□□□□ -0.17
GFM2-202ENST00000345239 ABCC1P33527 1531 aa13.98□□□□□ -0.17
GFM2-202ENST00000345239 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
GFM2-202ENST00000345239 ADGRL2O95490 1459 aa13.96□□□□□ -0.17
GFM2-202ENST00000345239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.18
GFM2-202ENST00000345239 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.18
GFM2-202ENST00000345239 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
GFM2-202ENST00000345239 ARHGAP5Q13017 1502 aa13.94□□□□□ -0.18
GFM2-202ENST00000345239 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
GFM2-202ENST00000345239 DAPK1P53355 1430 aa13.94□□□□□ -0.18
GFM2-202ENST00000345239 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
GFM2-202ENST00000345239 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
GFM2-202ENST00000345239 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
GFM2-202ENST00000345239 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
GFM2-202ENST00000345239 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
GFM2-202ENST00000345239 PPRC1Q5VV67 1664 aaKnown RBP13.92□□□□□ -0.18
GFM2-202ENST00000345239 NEO1Q92859 1461 aa13.91□□□□□ -0.18
GFM2-202ENST00000345239 CCDC141Q6ZP82 1450 aa13.9□□□□□ -0.18
GFM2-202ENST00000345239 ABCC5O15440 1437 aa13.9□□□□□ -0.18
GFM2-202ENST00000345239 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
GFM2-202ENST00000345239 SYCP2Q9BX26 1530 aa13.89□□□□□ -0.19
GFM2-202ENST00000345239 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
GFM2-202ENST00000345239 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
GFM2-202ENST00000345239 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
GFM2-202ENST00000345239 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
GFM2-202ENST00000345239 FANCAO15360 1455 aa13.87□□□□□ -0.19
GFM2-202ENST00000345239 KDM5CP41229 1560 aa13.87□□□□□ -0.19
GFM2-202ENST00000345239 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
GFM2-202ENST00000345239 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
GFM2-202ENST00000345239 CD109Q6YHK3 1445 aa13.85□□□□□ -0.19
GFM2-202ENST00000345239 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
GFM2-202ENST00000345239 DNAJC5Q9H3Z4 198 aa13.84□□□□□ -0.19
GFM2-202ENST00000345239 ZFYVE16Q7Z3T8 1539 aa13.83□□□□□ -0.19
GFM2-202ENST00000345239 RTEL1-TNFRSF6BF6WH68 1400 aa13.83□□□□□ -0.2
GFM2-202ENST00000345239 NAIPQ13075 1403 aa13.83□□□□□ -0.2
GFM2-202ENST00000345239 TEX14Q8IWB6 1497 aa13.83□□□□□ -0.2
GFM2-202ENST00000345239 SETD5Q9C0A6 1442 aa13.82□□□□□ -0.2
GFM2-202ENST00000345239 EFCAB2Q5VUJ9 269 aa13.82□□□□□ -0.2
GFM2-202ENST00000345239 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
GFM2-202ENST00000345239 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
GFM2-202ENST00000345239 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
GFM2-202ENST00000345239 ZMYM4Q5VZL5 1548 aa13.82□□□□□ -0.2
GFM2-202ENST00000345239 ADGRL1O94910 1474 aa13.81□□□□□ -0.2
GFM2-202ENST00000345239 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
GFM2-202ENST00000345239 NCOA1Q15788 1441 aa13.8□□□□□ -0.2
GFM2-202ENST00000345239 EIF2AK4Q9P2K8 1649 aaKnown RBP13.8□□□□□ -0.2
GFM2-202ENST00000345239 ZNF518AQ6AHZ1 1483 aa13.79□□□□□ -0.2
GFM2-202ENST00000345239 POGZQ7Z3K3 1410 aa13.79□□□□□ -0.2
GFM2-202ENST00000345239 FRMPD1Q5SYB0 1578 aa13.79□□□□□ -0.2
GFM2-202ENST00000345239 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
GFM2-202ENST00000345239 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
GFM2-202ENST00000345239 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
GFM2-202ENST00000345239 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
GFM2-202ENST00000345239 UNC13BO14795 1591 aa13.78□□□□□ -0.2
GFM2-202ENST00000345239 ATP7AQ04656 1500 aa13.77□□□□□ -0.2
GFM2-202ENST00000345239 DUOX2Q9NRD8 1548 aa13.77□□□□□ -0.2
GFM2-202ENST00000345239 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
GFM2-202ENST00000345239 ANKRD30AQ9BXX3 1397 aa13.76□□□□□ -0.21
GFM2-202ENST00000345239 MLH3Q9UHC1 1453 aa13.76□□□□□ -0.21
GFM2-202ENST00000345239 RAB3GAP2Q9H2M9 1393 aa13.76□□□□□ -0.21
GFM2-202ENST00000345239 TRAPPC8Q9Y2L5 1435 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 KDM6BO15054 1643 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 REREQ9P2R6 1566 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
GFM2-202ENST00000345239 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
GFM2-202ENST00000345239 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
GFM2-202ENST00000345239 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
GFM2-202ENST00000345239 CLSPNQ9HAW4 1339 aa13.72□□□□□ -0.21
GFM2-202ENST00000345239 RNF17Q9BXT8 1623 aaKnown RBP13.71□□□□□ -0.21
GFM2-202ENST00000345239 ABCA6Q8N139 1617 aa13.71□□□□□ -0.22
GFM2-202ENST00000345239 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
GFM2-202ENST00000345239 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
GFM2-202ENST00000345239 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
GFM2-202ENST00000345239 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
GFM2-202ENST00000345239 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
GFM2-202ENST00000345239 KIF15Q9NS87 1388 aa13.69□□□□□ -0.22
GFM2-202ENST00000345239 ANKRD50Q9ULJ7 1429 aa13.68□□□□□ -0.22
GFM2-202ENST00000345239 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.223e-9■■■■■ 30.9
GFM2-202ENST00000345239 TSPY4P0CV99 314 aa13.68□□□□□ -0.22
GFM2-202ENST00000345239 TSPY10P0CW01 314 aa13.68□□□□□ -0.22
GFM2-202ENST00000345239 FAM69CQ0P6D2 419 aa13.67□□□□□ -0.22
GFM2-202ENST00000345239 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
GFM2-202ENST00000345239 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
GFM2-202ENST00000345239 ARHGEF40Q8TER5 1519 aa13.66□□□□□ -0.22
GFM2-202ENST00000345239 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
GFM2-202ENST00000345239 MROH1Q8NDA8 1641 aa13.65□□□□□ -0.22
GFM2-202ENST00000345239 ITGAEP38570 1179 aa13.64□□□□□ -0.23
GFM2-202ENST00000345239 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
GFM2-202ENST00000345239 PZPP20742 1482 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms