RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 GOLGA3Q08378 1498 aa13.01□□□□□ -0.33
ECM2-201ENST00000344604 ITGAEP38570 1179 aa13□□□□□ -0.33
ECM2-201ENST00000344604 NAP1L5Q96NT1 182 aaPredicted RBP12.98□□□□□ -0.33
ECM2-201ENST00000344604 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
ECM2-201ENST00000344604 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
ECM2-201ENST00000344604 PLEKHD1A6NEE1 506 aa12.98□□□□□ -0.33
ECM2-201ENST00000344604 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
ECM2-201ENST00000344604 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
ECM2-201ENST00000344604 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
ECM2-201ENST00000344604 NAP1L2Q9ULW6 460 aaPredicted RBP12.94□□□□□ -0.34
ECM2-201ENST00000344604 NOP58Q9Y2X3 529 aaKnown RBP12.94□□□□□ -0.34
ECM2-201ENST00000344604 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
ECM2-201ENST00000344604 CLIP1P30622 1438 aa12.94□□□□□ -0.34
ECM2-201ENST00000344604 RSPH4AQ5TD94 716 aa12.92□□□□□ -0.34
ECM2-201ENST00000344604 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
ECM2-201ENST00000344604 C11orf95C9JLR9 678 aaPredicted RBP12.9□□□□□ -0.34
ECM2-201ENST00000344604 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
ECM2-201ENST00000344604 ASXL2Q76L83 1435 aa12.9□□□□□ -0.35
ECM2-201ENST00000344604 CHMP4BQ9H444 224 aaKnown RBP12.88□□□□□ -0.35
ECM2-201ENST00000344604 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
ECM2-201ENST00000344604 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
ECM2-201ENST00000344604 SHROOM2Q13796 1616 aa12.87□□□□□ -0.35
ECM2-201ENST00000344604 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
ECM2-201ENST00000344604 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
ECM2-201ENST00000344604 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
ECM2-201ENST00000344604 UGGT2Q9NYU1 1516 aa12.86□□□□□ -0.35
ECM2-201ENST00000344604 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
ECM2-201ENST00000344604 RAPGEF3O95398 923 aa12.85□□□□□ -0.35
ECM2-201ENST00000344604 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
ECM2-201ENST00000344604 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
ECM2-201ENST00000344604 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
ECM2-201ENST00000344604 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
ECM2-201ENST00000344604 ABCC2Q92887 1545 aa12.83□□□□□ -0.35
ECM2-201ENST00000344604 KIF21BO75037 1637 aa12.83□□□□□ -0.36
ECM2-201ENST00000344604 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
ECM2-201ENST00000344604 RRP9O43818 475 aaKnown RBP12.82□□□□□ -0.36
ECM2-201ENST00000344604 MLECQ14165 292 aa12.81□□□□□ -0.36
ECM2-201ENST00000344604 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
ECM2-201ENST00000344604 ATP10BO94823 1461 aa12.81□□□□□ -0.36
ECM2-201ENST00000344604 CDK13Q14004 1512 aaKnown RBP12.8□□□□□ -0.36
ECM2-201ENST00000344604 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
ECM2-201ENST00000344604 FMN1Q68DA7 1419 aa12.78□□□□□ -0.36
ECM2-201ENST00000344604 NEFMP07197 916 aa12.78□□□□□ -0.36
ECM2-201ENST00000344604 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
ECM2-201ENST00000344604 CD109Q6YHK3 1445 aa12.77□□□□□ -0.37
ECM2-201ENST00000344604 KANK4Q5T7N3 995 aaPredicted RBP12.77□□□□□ -0.37
ECM2-201ENST00000344604 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
ECM2-201ENST00000344604 IPO4Q8TEX9 1081 aaKnown RBP12.75□□□□□ -0.37
ECM2-201ENST00000344604 ABCC10Q5T3U5 1492 aa12.75□□□□□ -0.37
ECM2-201ENST00000344604 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
ECM2-201ENST00000344604 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
ECM2-201ENST00000344604 IRX6P78412 446 aaPredicted RBP12.74□□□□□ -0.37
ECM2-201ENST00000344604 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
ECM2-201ENST00000344604 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
ECM2-201ENST00000344604 WDR7Q9Y4E6 1490 aa12.73□□□□□ -0.37
ECM2-201ENST00000344604 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
ECM2-201ENST00000344604 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
ECM2-201ENST00000344604 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
ECM2-201ENST00000344604 WASHC2AQ641Q2 1341 aa12.72□□□□□ -0.37
ECM2-201ENST00000344604 RGS3P49796 1198 aa12.72□□□□□ -0.37
ECM2-201ENST00000344604 KDM5BQ9UGL1 1544 aa12.72□□□□□ -0.37
ECM2-201ENST00000344604 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
ECM2-201ENST00000344604 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
ECM2-201ENST00000344604 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.38
ECM2-201ENST00000344604 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
ECM2-201ENST00000344604 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
ECM2-201ENST00000344604 EPRSP07814 1512 aaKnown RBP12.69□□□□□ -0.38
ECM2-201ENST00000344604 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
ECM2-201ENST00000344604 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
ECM2-201ENST00000344604 ABCA8O94911 1581 aa12.68□□□□□ -0.38
ECM2-201ENST00000344604 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
ECM2-201ENST00000344604 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
ECM2-201ENST00000344604 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
ECM2-201ENST00000344604 PRDM4Q9UKN5 801 aa12.67□□□□□ -0.38
ECM2-201ENST00000344604 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
ECM2-201ENST00000344604 EFCAB5A4FU69 1503 aa12.66□□□□□ -0.38
ECM2-201ENST00000344604 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
ECM2-201ENST00000344604 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
ECM2-201ENST00000344604 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
ECM2-201ENST00000344604 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
ECM2-201ENST00000344604 MAPKBP1O60336 1514 aa12.64□□□□□ -0.39
ECM2-201ENST00000344604 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
ECM2-201ENST00000344604 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
ECM2-201ENST00000344604 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
ECM2-201ENST00000344604 PCF11O94913 1555 aaKnown RBP12.62□□□□□ -0.39
ECM2-201ENST00000344604 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
ECM2-201ENST00000344604 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
ECM2-201ENST00000344604 FTSJ3Q8IY81 847 aaKnown RBP12.61□□□□□ -0.39
ECM2-201ENST00000344604 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
ECM2-201ENST00000344604 KIF13AQ9H1H9 1805 aa12.6□□□□□ -0.39
ECM2-201ENST00000344604 VPS8Q8N3P4 1428 aa12.6□□□□□ -0.39
ECM2-201ENST00000344604 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
ECM2-201ENST00000344604 GGT6Q6P531 493 aa12.59□□□□□ -0.39
ECM2-201ENST00000344604 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
ECM2-201ENST00000344604 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
ECM2-201ENST00000344604 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
ECM2-201ENST00000344604 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
ECM2-201ENST00000344604 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.4
ECM2-201ENST00000344604 FANCAO15360 1455 aa12.58□□□□□ -0.4
ECM2-201ENST00000344604 GSE1Q14687 1217 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms