RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 KIAA0556O60303 1618 aa32.13■■■□□ 2.73
NKX2-3-201ENST00000344586 FOXD1Q16676 465 aa32.12■■■□□ 2.73
NKX2-3-201ENST00000344586 TEX14Q8IWB6 1497 aa32.12■■■□□ 2.73
NKX2-3-201ENST00000344586 ABCC5O15440 1437 aa32.11■■■□□ 2.73
NKX2-3-201ENST00000344586 ANKRD30BQ9BXX2 1392 aa32.11■■■□□ 2.73
NKX2-3-201ENST00000344586 RBM19Q9Y4C8 960 aaKnown RBP32.09■■■□□ 2.73
NKX2-3-201ENST00000344586 DISP1Q96F81 1524 aa32.09■■■□□ 2.73
NKX2-3-201ENST00000344586 CCDC7Q96M83 1385 aa32.08■■■□□ 2.73
NKX2-3-201ENST00000344586 NUP153P49790 1475 aaKnown RBP32.07■■■□□ 2.72
NKX2-3-201ENST00000344586 C11orf95C9JLR9 678 aaPredicted RBP32.06■■■□□ 2.72
NKX2-3-201ENST00000344586 RAPGEF6Q8TEU7 1601 aa32.04■■■□□ 2.72
NKX2-3-201ENST00000344586 KIAA0586Q9BVV6 1533 aa32.04■■■□□ 2.72
NKX2-3-201ENST00000344586 ZNF608Q9ULD9 1512 aaPredicted RBP32.03■■■□□ 2.72
NKX2-3-201ENST00000344586 NBPF8Q3BBV2 869 aa32.01■■■□□ 2.71
NKX2-3-201ENST00000344586 CCDC184Q52MB2 194 aa32.01■■■□□ 2.71
NKX2-3-201ENST00000344586 ZNF644Q9H582 1327 aaPredicted RBP31.99■■■□□ 2.71
NKX2-3-201ENST00000344586 POLR1AO95602 1720 aaPredicted RBP31.99■■■□□ 2.71
NKX2-3-201ENST00000344586 IFT140Q96RY7 1462 aa31.99■■■□□ 2.71
NKX2-3-201ENST00000344586 SPATA31E1Q6ZUB1 1445 aa31.98■■■□□ 2.71
NKX2-3-201ENST00000344586 PRKRIP1Q9H875 184 aaPredicted RBP31.97■■■□□ 2.71
NKX2-3-201ENST00000344586 PZPP20742 1482 aa31.92■■■□□ 2.7
NKX2-3-201ENST00000344586 IRX6P78412 446 aaPredicted RBP31.92■■■□□ 2.7
NKX2-3-201ENST00000344586 SLC4A1APQ9BWU0 796 aaKnown RBP31.91■■■□□ 2.7
NKX2-3-201ENST00000344586 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
NKX2-3-201ENST00000344586 CAMSAP2Q08AD1 1489 aa31.89■■■□□ 2.7
NKX2-3-201ENST00000344586 KIF7Q2M1P5 1343 aa31.89■■■□□ 2.7
NKX2-3-201ENST00000344586 ADGBQ8N7X0 1667 aa31.88■■■□□ 2.69
NKX2-3-201ENST00000344586 ITSN2Q9NZM3 1697 aa31.87■■■□□ 2.69
NKX2-3-201ENST00000344586 TROQ12816 1431 aaPredicted RBP31.86■■■□□ 2.69
NKX2-3-201ENST00000344586 MBD5Q9P267 1494 aa31.86■■■□□ 2.69
NKX2-3-201ENST00000344586 CDK11AQ9UQ88 783 aaPredicted RBP31.85■■■□□ 2.69
NKX2-3-201ENST00000344586 PRG4Q92954 1404 aaPredicted RBP31.84■■■□□ 2.69
NKX2-3-201ENST00000344586 EIF4G3O43432 1585 aaKnown RBP31.84■■■□□ 2.69
NKX2-3-201ENST00000344586 ERICH6BQ5W0A0 696 aa31.84■■■□□ 2.69
NKX2-3-201ENST00000344586 MRS2Q9HD23 443 aa31.84■■■□□ 2.69
NKX2-3-201ENST00000344586 CROCC2H7BZ55 1655 aa31.82■■■□□ 2.69
NKX2-3-201ENST00000344586 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
NKX2-3-201ENST00000344586 ZBED9Q6R2W3 1325 aa31.81■■■□□ 2.68
NKX2-3-201ENST00000344586 FAM9BQ8IZU0 186 aa31.8■■■□□ 2.68
NKX2-3-201ENST00000344586 ADGRL2O95490 1459 aa31.8■■■□□ 2.68
NKX2-3-201ENST00000344586 KIF14Q15058 1648 aa31.79■■■□□ 2.68
NKX2-3-201ENST00000344586 GPATCH8Q9UKJ3 1502 aaKnown RBP31.78■■■□□ 2.68
NKX2-3-201ENST00000344586 KIAA1107Q9UPP5 1409 aa31.76■■■□□ 2.67
NKX2-3-201ENST00000344586 CFDP1Q9UEE9 299 aaPredicted RBP31.74■■■□□ 2.67
NKX2-3-201ENST00000344586 PLB1Q6P1J6 1458 aa31.74■■■□□ 2.67
NKX2-3-201ENST00000344586 PPP4R2Q9NY27 417 aa31.72■■■□□ 2.67
NKX2-3-201ENST00000344586 CEP170Q5SW79 1584 aa31.72■■■□□ 2.67
NKX2-3-201ENST00000344586 BCORL1Q5H9F3 1711 aa31.71■■■□□ 2.67
NKX2-3-201ENST00000344586 DHX29Q7Z478 1369 aaKnown RBP31.7■■■□□ 2.66
NKX2-3-201ENST00000344586 MSH5O43196 834 aa31.68■■■□□ 2.66
NKX2-3-201ENST00000344586 FANCIQ9NVI1 1328 aa31.67■■■□□ 2.66
NKX2-3-201ENST00000344586 USP47Q96K76 1375 aa31.66■■■□□ 2.66
NKX2-3-201ENST00000344586 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
NKX2-3-201ENST00000344586 KDM5CP41229 1560 aa31.66■■■□□ 2.66
NKX2-3-201ENST00000344586 ANKRD30AQ9BXX3 1397 aa31.63■■■□□ 2.65
NKX2-3-201ENST00000344586 SYNJ2O15056 1496 aa31.6■■■□□ 2.65
NKX2-3-201ENST00000344586 PKD2Q13563 968 aa31.6■■■□□ 2.65
NKX2-3-201ENST00000344586 ZNF777Q9ULD5 760 aaPredicted RBP31.6■■■□□ 2.65
NKX2-3-201ENST00000344586 ANKRD50Q9ULJ7 1429 aa31.59■■■□□ 2.65
NKX2-3-201ENST00000344586 CDC42BPAQ5VT25 1732 aa31.58■■■□□ 2.65
NKX2-3-201ENST00000344586 UHRF1BP1Q6BDS2 1440 aa31.57■■■□□ 2.64
NKX2-3-201ENST00000344586 SHANK2Q9UPX8 1470 aa31.56■■■□□ 2.64
NKX2-3-201ENST00000344586 RALGAPBQ86X10 1494 aa31.56■■■□□ 2.64
NKX2-3-201ENST00000344586 SMG6Q86US8 1419 aaKnown RBP31.55■■■□□ 2.64
NKX2-3-201ENST00000344586 ZNF326Q5BKZ1 582 aaKnown RBP31.54■■■□□ 2.64
NKX2-3-201ENST00000344586 ARID4BQ4LE39 1312 aaPredicted RBP31.54■■■□□ 2.64
NKX2-3-201ENST00000344586 CARMIL2Q6F5E8 1435 aa31.53■■■□□ 2.64
NKX2-3-201ENST00000344586 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
NKX2-3-201ENST00000344586 B4GALNT3Q6L9W6 998 aa31.52■■■□□ 2.64
NKX2-3-201ENST00000344586 CHMP7Q8WUX9 453 aaPredicted RBP31.52■■■□□ 2.64
NKX2-3-201ENST00000344586 KDM5DQ9BY66 1539 aa31.51■■■□□ 2.64
NKX2-3-201ENST00000344586 ARHGEF12Q9NZN5 1544 aa31.51■■■□□ 2.64
NKX2-3-201ENST00000344586 NUP160Q12769 1436 aa31.51■■■□□ 2.63
NKX2-3-201ENST00000344586 ABCA8O94911 1581 aa31.5■■■□□ 2.63
NKX2-3-201ENST00000344586 C9orf84Q5VXU9 1444 aa31.49■■■□□ 2.63
NKX2-3-201ENST00000344586 POLR3GLQ9BT43 218 aa31.45■■■□□ 2.63
NKX2-3-201ENST00000344586 NUP155O75694 1391 aa31.45■■■□□ 2.63
NKX2-3-201ENST00000344586 ROCK2O75116 1388 aaKnown RBP31.45■■■□□ 2.62
NKX2-3-201ENST00000344586 JPH4Q96JJ6 628 aa31.43■■■□□ 2.62
NKX2-3-201ENST00000344586 ATP10BO94823 1461 aa31.41■■■□□ 2.62
NKX2-3-201ENST00000344586 CNGB1Q14028 1251 aaPredicted RBP31.4■■■□□ 2.62
NKX2-3-201ENST00000344586 NUDCQ9Y266 331 aa31.4■■■□□ 2.62
NKX2-3-201ENST00000344586 PTPRGP23470 1445 aa31.39■■■□□ 2.62
NKX2-3-201ENST00000344586 RNF123Q5XPI4 1314 aa31.38■■■□□ 2.61
NKX2-3-201ENST00000344586 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
NKX2-3-201ENST00000344586 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
NKX2-3-201ENST00000344586 FBLN2P98095 1184 aa31.37■■■□□ 2.61
NKX2-3-201ENST00000344586 CARD11Q9BXL7 1154 aa31.36■■■□□ 2.61
NKX2-3-201ENST00000344586 ARHGEF5Q12774 1597 aa31.36■■■□□ 2.61
NKX2-3-201ENST00000344586 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
NKX2-3-201ENST00000344586 E9PCH4 1651 aa31.34■■■□□ 2.61
NKX2-3-201ENST00000344586 KIF15Q9NS87 1388 aa31.33■■■□□ 2.61
NKX2-3-201ENST00000344586 ERICH6Q7L0X2 663 aa31.28■■■□□ 2.6
NKX2-3-201ENST00000344586 TSPY4P0CV99 314 aa31.28■■■□□ 2.6
NKX2-3-201ENST00000344586 TSPY10P0CW01 314 aa31.28■■■□□ 2.6
NKX2-3-201ENST00000344586 LRPPRCP42704 1394 aaKnown RBP31.27■■■□□ 2.6
NKX2-3-201ENST00000344586 TMC1Q8TDI8 760 aa31.26■■■□□ 2.6
NKX2-3-201ENST00000344586 ST20-MTHFSA0A0A6YYL1 179 aa31.26■■■□□ 2.59
NKX2-3-201ENST00000344586 KDM2AQ9Y2K7 1162 aa31.24■■■□□ 2.59
NKX2-3-201ENST00000344586 SAMD9LQ8IVG5 1584 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms