RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 POGZQ7Z3K3 1410 aa32.17■■■□□ 2.74
CEACAM3-201ENST00000344550 ARHGEF40Q8TER5 1519 aa32.16■■■□□ 2.74
CEACAM3-201ENST00000344550 ARHGAP5Q13017 1502 aa32.15■■■□□ 2.74
CEACAM3-201ENST00000344550 ZNF518AQ6AHZ1 1483 aa32.09■■■□□ 2.73
CEACAM3-201ENST00000344550 ZFYVE16Q7Z3T8 1539 aa32.08■■■□□ 2.73
CEACAM3-201ENST00000344550 PREX2Q70Z35 1606 aa32.08■■■□□ 2.73
CEACAM3-201ENST00000344550 CDC42BPBQ9Y5S2 1711 aa32.05■■■□□ 2.72
CEACAM3-201ENST00000344550 ARID4BQ4LE39 1312 aaPredicted RBP32.03■■■□□ 2.72
CEACAM3-201ENST00000344550 ADAMTSL3P82987 1691 aa32.03■■■□□ 2.72
CEACAM3-201ENST00000344550 MTUS2Q5JR59 1369 aa32.02■■■□□ 2.72
CEACAM3-201ENST00000344550 YEATS2Q9ULM3 1422 aa32■■■□□ 2.71
CEACAM3-201ENST00000344550 KDM5CP41229 1560 aa32■■■□□ 2.71
CEACAM3-201ENST00000344550 BCORL1Q5H9F3 1711 aa32■■■□□ 2.71
CEACAM3-201ENST00000344550 ATP10AO60312 1499 aa31.97■■■□□ 2.71
CEACAM3-201ENST00000344550 GPATCH8Q9UKJ3 1502 aaKnown RBP31.97■■■□□ 2.71
CEACAM3-201ENST00000344550 LOC105371045A0A1W2PR82 267 aa31.97■■■□□ 2.71
CEACAM3-201ENST00000344550 CDC42BPAQ5VT25 1732 aa31.97■■■□□ 2.71
CEACAM3-201ENST00000344550 ABCC1P33527 1531 aa31.95■■■□□ 2.71
CEACAM3-201ENST00000344550 AFAP1Q8N556 730 aa31.95■■■□□ 2.71
CEACAM3-201ENST00000344550 MLH3Q9UHC1 1453 aa31.94■■■□□ 2.7
CEACAM3-201ENST00000344550 C9orf84Q5VXU9 1444 aa31.92■■■□□ 2.7
CEACAM3-201ENST00000344550 PTPRMP28827 1452 aa31.92■■■□□ 2.7
CEACAM3-201ENST00000344550 EHBP1L1Q8N3D4 1523 aa31.92■■■□□ 2.7
CEACAM3-201ENST00000344550 CCNB3Q8WWL7 1395 aa31.92■■■□□ 2.7
CEACAM3-201ENST00000344550 PLEKHH2Q8IVE3 1493 aa31.9■■■□□ 2.7
CEACAM3-201ENST00000344550 VPS8Q8N3P4 1428 aa31.89■■■□□ 2.7
CEACAM3-201ENST00000344550 KIAA1107Q9UPP5 1409 aa31.89■■■□□ 2.7
CEACAM3-201ENST00000344550 HECW2Q9P2P5 1572 aa31.89■■■□□ 2.7
CEACAM3-201ENST00000344550 CFDP1Q9UEE9 299 aaPredicted RBP31.88■■■□□ 2.69
CEACAM3-201ENST00000344550 ARHGEF12Q9NZN5 1544 aa31.87■■■□□ 2.69
CEACAM3-201ENST00000344550 TRAPPC8Q9Y2L5 1435 aa31.86■■■□□ 2.69
CEACAM3-201ENST00000344550 ITSN2Q9NZM3 1697 aa31.86■■■□□ 2.69
CEACAM3-201ENST00000344550 REREQ9P2R6 1566 aa31.85■■■□□ 2.69
CEACAM3-201ENST00000344550 MADDQ8WXG6 1647 aa31.84■■■□□ 2.69
CEACAM3-201ENST00000344550 SAMD9LQ8IVG5 1584 aa31.81■■■□□ 2.68
CEACAM3-201ENST00000344550 MYT1LQ9UL68 1186 aa31.81■■■□□ 2.68
CEACAM3-201ENST00000344550 ZNF777Q9ULD5 760 aaPredicted RBP31.81■■■□□ 2.68
CEACAM3-201ENST00000344550 MAP3K1Q13233 1512 aa31.78■■■□□ 2.68
CEACAM3-201ENST00000344550 SIGLEC1Q9BZZ2 1709 aa31.78■■■□□ 2.68
CEACAM3-201ENST00000344550 DIP2CQ9Y2E4 1556 aa31.77■■■□□ 2.68
CEACAM3-201ENST00000344550 TIAM1Q13009 1591 aa31.77■■■□□ 2.68
CEACAM3-201ENST00000344550 SYCP2Q9BX26 1530 aa31.75■■■□□ 2.67
CEACAM3-201ENST00000344550 AGLP35573 1532 aa31.74■■■□□ 2.67
CEACAM3-201ENST00000344550 HNRNPMP52272 730 aaKnown RBP eCLIP31.72■■■□□ 2.67
CEACAM3-201ENST00000344550 SPAG9O60271 1321 aaKnown RBP31.72■■■□□ 2.67
CEACAM3-201ENST00000344550 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
CEACAM3-201ENST00000344550 RIMS1Q86UR5 1692 aaKnown RBP31.71■■■□□ 2.67
CEACAM3-201ENST00000344550 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
CEACAM3-201ENST00000344550 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
CEACAM3-201ENST00000344550 NCOA2Q15596 1464 aa31.7■■■□□ 2.66
CEACAM3-201ENST00000344550 MLECQ14165 292 aa31.69■■■□□ 2.66
CEACAM3-201ENST00000344550 LRRC9Q6ZRR7 1453 aa31.68■■■□□ 2.66
CEACAM3-201ENST00000344550 RSPH4AQ5TD94 716 aa31.66■■■□□ 2.66
CEACAM3-201ENST00000344550 FER1L4A9Z1Z3 1794 aa31.66■■■□□ 2.66
CEACAM3-201ENST00000344550 MBD5Q9P267 1494 aa31.63■■■□□ 2.65
CEACAM3-201ENST00000344550 ATP7AQ04656 1500 aa31.61■■■□□ 2.65
CEACAM3-201ENST00000344550 INO80Q9ULG1 1556 aaPredicted RBP31.6■■■□□ 2.65
CEACAM3-201ENST00000344550 RTEL1-TNFRSF6BF6WH68 1400 aa31.59■■■□□ 2.65
CEACAM3-201ENST00000344550 ZNF644Q9H582 1327 aaPredicted RBP31.59■■■□□ 2.65
CEACAM3-201ENST00000344550 LMTK3Q96Q04 1460 aa31.54■■■□□ 2.64
CEACAM3-201ENST00000344550 APLP2Q06481 763 aa31.54■■■□□ 2.64
CEACAM3-201ENST00000344550 CNTLNQ9NXG0 1405 aa31.54■■■□□ 2.64
CEACAM3-201ENST00000344550 ESF1Q9H501 851 aaKnown RBP31.53■■■□□ 2.64
CEACAM3-201ENST00000344550 A2MP01023 1474 aa31.52■■■□□ 2.64
CEACAM3-201ENST00000344550 CAMSAP2Q08AD1 1489 aa31.52■■■□□ 2.64
CEACAM3-201ENST00000344550 CCDC141Q6ZP82 1450 aa31.51■■■□□ 2.63
CEACAM3-201ENST00000344550 KANK4Q5T7N3 995 aaPredicted RBP31.5■■■□□ 2.63
CEACAM3-201ENST00000344550 PLXNC1O60486 1568 aa31.5■■■□□ 2.63
CEACAM3-201ENST00000344550 MIA2Q96PC5 1412 aa31.49■■■□□ 2.63
CEACAM3-201ENST00000344550 PPP6R1Q9UPN7 881 aa31.49■■■□□ 2.63
CEACAM3-201ENST00000344550 ADGBQ8N7X0 1667 aa31.47■■■□□ 2.63
CEACAM3-201ENST00000344550 ARHGEF5Q12774 1597 aa31.47■■■□□ 2.63
CEACAM3-201ENST00000344550 SETD1BQ9UPS6 1966 aaKnown RBP31.45■■■□□ 2.62
CEACAM3-201ENST00000344550 MYOM3Q5VTT5 1437 aa31.44■■■□□ 2.62
CEACAM3-201ENST00000344550 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
CEACAM3-201ENST00000344550 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
CEACAM3-201ENST00000344550 DHX29Q7Z478 1369 aaKnown RBP31.42■■■□□ 2.62
CEACAM3-201ENST00000344550 PLPPR3Q6T4P5 718 aa31.41■■■□□ 2.62
CEACAM3-201ENST00000344550 CEBPAP49715 358 aaPredicted RBP31.4■■■□□ 2.62
CEACAM3-201ENST00000344550 MROH2AA6NES4 1674 aa31.37■■■□□ 2.61
CEACAM3-201ENST00000344550 PREX1Q8TCU6 1659 aa31.37■■■□□ 2.61
CEACAM3-201ENST00000344550 C3P01024 1663 aa31.35■■■□□ 2.61
CEACAM3-201ENST00000344550 NPATQ14207 1427 aa31.33■■■□□ 2.61
CEACAM3-201ENST00000344550 UHRF1BP1Q6BDS2 1440 aa31.33■■■□□ 2.61
CEACAM3-201ENST00000344550 ZMYM3Q14202 1370 aa31.31■■■□□ 2.6
CEACAM3-201ENST00000344550 GGT6Q6P531 493 aa31.3■■■□□ 2.6
CEACAM3-201ENST00000344550 MAST1Q9Y2H9 1570 aa31.3■■■□□ 2.6
CEACAM3-201ENST00000344550 FAM135AQ9P2D6 1515 aa31.29■■■□□ 2.6
CEACAM3-201ENST00000344550 HSPA2P54652 639 aa31.28■■■□□ 2.6
CEACAM3-201ENST00000344550 KIF3BO15066 747 aa31.23■■■□□ 2.59
CEACAM3-201ENST00000344550 CLTCQ00610 1675 aaKnown RBP31.19■■■□□ 2.58
CEACAM3-201ENST00000344550 FGD6Q6ZV73 1430 aa31.19■■■□□ 2.58
CEACAM3-201ENST00000344550 DMRT2Q9Y5R5 561 aa31.19■■■□□ 2.58
CEACAM3-201ENST00000344550 TCOF1Q13428 1488 aaKnown RBP31.18■■■□□ 2.58
CEACAM3-201ENST00000344550 SHANK2Q9UPX8 1470 aa31.18■■■□□ 2.58
CEACAM3-201ENST00000344550 PTPN23Q9H3S7 1636 aa31.17■■■□□ 2.58
CEACAM3-201ENST00000344550 PTPRKQ15262 1439 aa31.15■■■□□ 2.58
CEACAM3-201ENST00000344550 KDM5DQ9BY66 1539 aa31.13■■■□□ 2.57
CEACAM3-201ENST00000344550 ABCC5O15440 1437 aa31.12■■■□□ 2.57
CEACAM3-201ENST00000344550 EIF2AK4Q9P2K8 1649 aaKnown RBP31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms