RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 ARHGAP5Q13017 1502 aa32.89■■■□□ 2.86
SDHC-201ENST00000342751 EFCAB2Q5VUJ9 269 aa32.88■■■□□ 2.85
SDHC-201ENST00000342751 ZMYM4Q5VZL5 1548 aa32.87■■■□□ 2.85
SDHC-201ENST00000342751 ZFYVE16Q7Z3T8 1539 aa32.87■■■□□ 2.85
SDHC-201ENST00000342751 FYCO1Q9BQS8 1478 aa32.86■■■□□ 2.85
SDHC-201ENST00000342751 POGZQ7Z3K3 1410 aa32.86■■■□□ 2.85
SDHC-201ENST00000342751 YEATS2Q9ULM3 1422 aa32.85■■■□□ 2.85
SDHC-201ENST00000342751 PTPRMP28827 1452 aa32.85■■■□□ 2.85
SDHC-201ENST00000342751 MADDQ8WXG6 1647 aa32.83■■■□□ 2.85
SDHC-201ENST00000342751 MAGI2Q86UL8 1455 aa32.76■■■□□ 2.84
SDHC-201ENST00000342751 CDC42BPBQ9Y5S2 1711 aa32.74■■■□□ 2.83
SDHC-201ENST00000342751 SIGLEC1Q9BZZ2 1709 aa32.74■■■□□ 2.83
SDHC-201ENST00000342751 MYT1LQ9UL68 1186 aa32.73■■■□□ 2.83
SDHC-201ENST00000342751 PREX2Q70Z35 1606 aa32.73■■■□□ 2.83
SDHC-201ENST00000342751 RIMS1Q86UR5 1692 aaKnown RBP32.72■■■□□ 2.83
SDHC-201ENST00000342751 MLECQ14165 292 aa32.71■■■□□ 2.83
SDHC-201ENST00000342751 PLPPR3Q6T4P5 718 aa32.71■■■□□ 2.83
SDHC-201ENST00000342751 ZNF518AQ6AHZ1 1483 aa32.69■■■□□ 2.82
SDHC-201ENST00000342751 CEP162Q5TB80 1403 aa32.68■■■□□ 2.82
SDHC-201ENST00000342751 AFAP1Q8N556 730 aa32.67■■■□□ 2.82
SDHC-201ENST00000342751 CDC42BPAQ5VT25 1732 aa32.65■■■□□ 2.82
SDHC-201ENST00000342751 ATP10AO60312 1499 aa32.63■■■□□ 2.81
SDHC-201ENST00000342751 ABCC1P33527 1531 aa32.62■■■□□ 2.81
SDHC-201ENST00000342751 C9orf84Q5VXU9 1444 aa32.62■■■□□ 2.81
SDHC-201ENST00000342751 ZNF777Q9ULD5 760 aaPredicted RBP32.62■■■□□ 2.81
SDHC-201ENST00000342751 KDM5CP41229 1560 aa32.62■■■□□ 2.81
SDHC-201ENST00000342751 ILDR1Q86SU0 546 aaPredicted RBP32.61■■■□□ 2.81
SDHC-201ENST00000342751 ITSN2Q9NZM3 1697 aa32.59■■■□□ 2.81
SDHC-201ENST00000342751 ARHGEF12Q9NZN5 1544 aa32.59■■■□□ 2.81
SDHC-201ENST00000342751 TRAPPC8Q9Y2L5 1435 aa32.58■■■□□ 2.81
SDHC-201ENST00000342751 MTUS2Q5JR59 1369 aa32.58■■■□□ 2.81
SDHC-201ENST00000342751 FER1L4A9Z1Z3 1794 aa32.56■■■□□ 2.8
SDHC-201ENST00000342751 DIP2CQ9Y2E4 1556 aa32.53■■■□□ 2.8
SDHC-201ENST00000342751 LMTK3Q96Q04 1460 aa32.53■■■□□ 2.8
SDHC-201ENST00000342751 GPATCH8Q9UKJ3 1502 aaKnown RBP32.52■■■□□ 2.8
SDHC-201ENST00000342751 ABCA6Q8N139 1617 aa32.52■■■□□ 2.8
SDHC-201ENST00000342751 LOC105371045A0A1W2PR82 267 aa32.52■■■□□ 2.8
SDHC-201ENST00000342751 SAMD9LQ8IVG5 1584 aa32.51■■■□□ 2.79
SDHC-201ENST00000342751 CCNB3Q8WWL7 1395 aa32.5■■■□□ 2.79
SDHC-201ENST00000342751 SYCP2Q9BX26 1530 aa32.49■■■□□ 2.79
SDHC-201ENST00000342751 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
SDHC-201ENST00000342751 CFDP1Q9UEE9 299 aaPredicted RBP32.46■■■□□ 2.79
SDHC-201ENST00000342751 EHBP1L1Q8N3D4 1523 aa32.46■■■□□ 2.79
SDHC-201ENST00000342751 HNRNPMP52272 730 aaKnown RBP eCLIP32.43■■■□□ 2.78
SDHC-201ENST00000342751 KIDINS220Q9ULH0 1771 aa32.41■■■□□ 2.78
SDHC-201ENST00000342751 TIAM1Q13009 1591 aa32.39■■■□□ 2.78
SDHC-201ENST00000342751 REREQ9P2R6 1566 aa32.38■■■□□ 2.77
SDHC-201ENST00000342751 SPAG9O60271 1321 aaKnown RBP32.36■■■□□ 2.77
SDHC-201ENST00000342751 CEBPAP49715 358 aaPredicted RBP32.35■■■□□ 2.77
SDHC-201ENST00000342751 HSPA2P54652 639 aa32.35■■■□□ 2.77
SDHC-201ENST00000342751 PLEKHH2Q8IVE3 1493 aa32.35■■■□□ 2.77
SDHC-201ENST00000342751 ZNF644Q9H582 1327 aaPredicted RBP32.3■■■□□ 2.76
SDHC-201ENST00000342751 KIAA1107Q9UPP5 1409 aa32.3■■■□□ 2.76
SDHC-201ENST00000342751 AGLP35573 1532 aa32.29■■■□□ 2.76
SDHC-201ENST00000342751 ATP7AQ04656 1500 aa32.29■■■□□ 2.76
SDHC-201ENST00000342751 VPS8Q8N3P4 1428 aa32.28■■■□□ 2.76
SDHC-201ENST00000342751 ESF1Q9H501 851 aaKnown RBP32.28■■■□□ 2.76
SDHC-201ENST00000342751 SUPT6HQ7KZ85 1726 aaKnown RBP32.27■■■□□ 2.76
SDHC-201ENST00000342751 PREX1Q8TCU6 1659 aa32.27■■■□□ 2.76
SDHC-201ENST00000342751 NCOA2Q15596 1464 aa32.26■■■□□ 2.75
SDHC-201ENST00000342751 INO80Q9ULG1 1556 aaPredicted RBP32.24■■■□□ 2.75
SDHC-201ENST00000342751 C3P01024 1663 aa32.18■■■□□ 2.74
SDHC-201ENST00000342751 A2MP01023 1474 aa32.16■■■□□ 2.74
SDHC-201ENST00000342751 FBXO41Q8TF61 875 aa32.16■■■□□ 2.74
SDHC-201ENST00000342751 CAMSAP2Q08AD1 1489 aa32.15■■■□□ 2.74
SDHC-201ENST00000342751 MBD5Q9P267 1494 aa32.15■■■□□ 2.74
SDHC-201ENST00000342751 LRRC9Q6ZRR7 1453 aa32.14■■■□□ 2.74
SDHC-201ENST00000342751 SETD1BQ9UPS6 1966 aaKnown RBP32.12■■■□□ 2.73
SDHC-201ENST00000342751 UHRF1BP1Q6BDS2 1440 aa32.12■■■□□ 2.73
SDHC-201ENST00000342751 PLXNC1O60486 1568 aa32.11■■■□□ 2.73
SDHC-201ENST00000342751 CNTLNQ9NXG0 1405 aa32.09■■■□□ 2.73
SDHC-201ENST00000342751 ADGBQ8N7X0 1667 aa32.09■■■□□ 2.73
SDHC-201ENST00000342751 CCDC141Q6ZP82 1450 aa32.08■■■□□ 2.73
SDHC-201ENST00000342751 KANK4Q5T7N3 995 aaPredicted RBP32.07■■■□□ 2.72
SDHC-201ENST00000342751 GGT6Q6P531 493 aa32.07■■■□□ 2.72
SDHC-201ENST00000342751 CLTCQ00610 1675 aaKnown RBP32.04■■■□□ 2.72
SDHC-201ENST00000342751 MROH2AA6NES4 1674 aa32.02■■■□□ 2.72
SDHC-201ENST00000342751 STRCQ7RTU9 1775 aa32.01■■■□□ 2.71
SDHC-201ENST00000342751 RTEL1-TNFRSF6BF6WH68 1400 aa32■■■□□ 2.71
SDHC-201ENST00000342751 ZMYM3Q14202 1370 aa31.98■■■□□ 2.71
SDHC-201ENST00000342751 MAP3K1Q13233 1512 aa31.98■■■□□ 2.71
SDHC-201ENST00000342751 APLP2Q06481 763 aa31.95■■■□□ 2.71
SDHC-201ENST00000342751 ARHGEF5Q12774 1597 aa31.94■■■□□ 2.7
SDHC-201ENST00000342751 DHX29Q7Z478 1369 aaKnown RBP31.94■■■□□ 2.7
SDHC-201ENST00000342751 RSPH4AQ5TD94 716 aa31.92■■■□□ 2.7
SDHC-201ENST00000342751 TSPY4P0CV99 314 aa31.91■■■□□ 2.7
SDHC-201ENST00000342751 TSPY10P0CW01 314 aa31.91■■■□□ 2.7
SDHC-201ENST00000342751 DMRT2Q9Y5R5 561 aa31.91■■■□□ 2.7
SDHC-201ENST00000342751 NPATQ14207 1427 aa31.91■■■□□ 2.7
SDHC-201ENST00000342751 MYOM3Q5VTT5 1437 aa31.91■■■□□ 2.7
SDHC-201ENST00000342751 KIF3BO15066 747 aa31.9■■■□□ 2.7
SDHC-201ENST00000342751 CERKQ8TCT0 537 aa31.9■■■□□ 2.7
SDHC-201ENST00000342751 PTPRKQ15262 1439 aa31.83■■■□□ 2.69
SDHC-201ENST00000342751 MIA2Q96PC5 1412 aa31.83■■■□□ 2.69
SDHC-201ENST00000342751 MYO3AQ8NEV4 1616 aa31.82■■■□□ 2.69
SDHC-201ENST00000342751 PPP6R1Q9UPN7 881 aa31.81■■■□□ 2.68
SDHC-201ENST00000342751 PTPRTO14522 1441 aa31.81■■■□□ 2.68
SDHC-201ENST00000342751 NCOA1Q15788 1441 aa31.79■■■□□ 2.68
SDHC-201ENST00000342751 CAMSAP1Q5T5Y3 1602 aa31.78■■■□□ 2.68
SDHC-201ENST00000342751 MAST1Q9Y2H9 1570 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms