RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.16
SYDE2-202ENST00000341460 POGKQ9P215 609 aa22.32■■□□□ 1.16
SYDE2-202ENST00000341460 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
SYDE2-202ENST00000341460 CCER2I3L3R5 266 aa22.3■■□□□ 1.16
SYDE2-202ENST00000341460 NEUROD2Q15784 382 aa22.3■■□□□ 1.16
SYDE2-202ENST00000341460 APPP05067 770 aa22.29■■□□□ 1.16
SYDE2-202ENST00000341460 SYAP1Q96A49 352 aaPredicted RBP22.28■■□□□ 1.16
SYDE2-202ENST00000341460 ERCC6Q03468 1493 aa22.25■■□□□ 1.15
SYDE2-202ENST00000341460 CHMP4BQ9H444 224 aaKnown RBP22.25■■□□□ 1.15
SYDE2-202ENST00000341460 MS4A1P11836 297 aa22.24■■□□□ 1.15
SYDE2-202ENST00000341460 FANCIQ9NVI1 1328 aa22.24■■□□□ 1.15
SYDE2-202ENST00000341460 FRAT1Q92837 279 aaPredicted RBP22.23■■□□□ 1.15
SYDE2-202ENST00000341460 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
SYDE2-202ENST00000341460 CCNB3Q8WWL7 1395 aa22.23■■□□□ 1.15
SYDE2-202ENST00000341460 NOC3LQ8WTT2 800 aaKnown RBP22.21■■□□□ 1.15
SYDE2-202ENST00000341460 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
SYDE2-202ENST00000341460 FAM13BQ9NYF5 915 aa22.2■■□□□ 1.15
SYDE2-202ENST00000341460 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
SYDE2-202ENST00000341460 FGD1P98174 961 aa22.2■■□□□ 1.14
SYDE2-202ENST00000341460 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
SYDE2-202ENST00000341460 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
SYDE2-202ENST00000341460 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
SYDE2-202ENST00000341460 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
SYDE2-202ENST00000341460 TMF1P82094 1093 aa22.16■■□□□ 1.14
SYDE2-202ENST00000341460 MCCP23508 829 aa22.16■■□□□ 1.14
SYDE2-202ENST00000341460 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
SYDE2-202ENST00000341460 KANK1Q14678 1352 aa22.15■■□□□ 1.14
SYDE2-202ENST00000341460 NAP1L2Q9ULW6 460 aaPredicted RBP22.15■■□□□ 1.14
SYDE2-202ENST00000341460 KCNJ4P48050 445 aa22.13■■□□□ 1.13
SYDE2-202ENST00000341460 MAP7D2Q96T17 732 aa22.13■■□□□ 1.13
SYDE2-202ENST00000341460 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
SYDE2-202ENST00000341460 DDX11L8A8MPP1 907 aa22.11■■□□□ 1.13
SYDE2-202ENST00000341460 HTATSF1O43719 755 aaKnown RBP22.11■■□□□ 1.13
SYDE2-202ENST00000341460 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
SYDE2-202ENST00000341460 OS9Q13438 667 aaPredicted RBP22.1■■□□□ 1.13
SYDE2-202ENST00000341460 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.1■■□□□ 1.13
SYDE2-202ENST00000341460 MTERF4Q7Z6M4 381 aaKnown RBP22.08■■□□□ 1.13
SYDE2-202ENST00000341460 NPHP1O15259 732 aa22.07■■□□□ 1.12
SYDE2-202ENST00000341460 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
SYDE2-202ENST00000341460 FAM43AQ8N2R8 423 aa22.06■■□□□ 1.12
SYDE2-202ENST00000341460 CSPP1Q1MSJ5 1256 aa22.05■■□□□ 1.12
SYDE2-202ENST00000341460 TEX35Q5T0J7 233 aa22.05■■□□□ 1.12
SYDE2-202ENST00000341460 EIF4G1Q04637 1599 aaKnown RBP22.05■■□□□ 1.12
SYDE2-202ENST00000341460 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
SYDE2-202ENST00000341460 GPS2Q13227 327 aa22.04■■□□□ 1.12
SYDE2-202ENST00000341460 PHF14O94880 888 aa22.03■■□□□ 1.12
SYDE2-202ENST00000341460 TPM4P67936 248 aa22.03■■□□□ 1.12
SYDE2-202ENST00000341460 SRPK2P78362 688 aaKnown RBP22.02■■□□□ 1.12
SYDE2-202ENST00000341460 NOM1Q5C9Z4 860 aaKnown RBP22.01■■□□□ 1.11
SYDE2-202ENST00000341460 CUX2O14529 1486 aa22.01■■□□□ 1.11
SYDE2-202ENST00000341460 SKOR2Q2VWA4 1001 aaPredicted RBP22■■□□□ 1.11
SYDE2-202ENST00000341460 MORC1Q86VD1 984 aa22■■□□□ 1.11
SYDE2-202ENST00000341460 SOGA1O94964 1423 aa21.99■■□□□ 1.11
SYDE2-202ENST00000341460 RCAN3Q9UKA8 241 aa21.98■■□□□ 1.11
SYDE2-202ENST00000341460 CCDC66A2RUB6 948 aa21.96■■□□□ 1.11
SYDE2-202ENST00000341460 TPM2P07951 284 aa21.96■■□□□ 1.11
SYDE2-202ENST00000341460 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
SYDE2-202ENST00000341460 GOLGA2Q08379 1002 aa21.96■■□□□ 1.11
SYDE2-202ENST00000341460 MLECQ14165 292 aa21.95■■□□□ 1.1
SYDE2-202ENST00000341460 SETD5Q9C0A6 1442 aa21.93■■□□□ 1.1
SYDE2-202ENST00000341460 CLSTN1O94985 981 aa21.93■■□□□ 1.1
SYDE2-202ENST00000341460 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
SYDE2-202ENST00000341460 RWDD1Q9H446 243 aaPredicted RBP21.92■■□□□ 1.1
SYDE2-202ENST00000341460 ARHGAP35Q9NRY4 1499 aa21.92■■□□□ 1.1
SYDE2-202ENST00000341460 SOX12O15370 315 aa21.91■■□□□ 1.1
SYDE2-202ENST00000341460 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
SYDE2-202ENST00000341460 PDE4AP27815 886 aa21.9■■□□□ 1.1
SYDE2-202ENST00000341460 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
SYDE2-202ENST00000341460 RTF1Q92541 710 aaKnown RBP21.9■■□□□ 1.1
SYDE2-202ENST00000341460 HSPA5P11021 654 aaKnown RBP21.89■■□□□ 1.1
SYDE2-202ENST00000341460 PKD2Q13563 968 aa21.89■■□□□ 1.09
SYDE2-202ENST00000341460 GGT6Q6P531 493 aa21.88■■□□□ 1.09
SYDE2-202ENST00000341460 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
SYDE2-202ENST00000341460 IL27Q8NEV9 243 aa21.88■■□□□ 1.09
SYDE2-202ENST00000341460 TRHP20396 242 aaPredicted RBP21.87■■□□□ 1.09
SYDE2-202ENST00000341460 SLC4A3P48751 1232 aa21.87■■□□□ 1.09
SYDE2-202ENST00000341460 KTN1Q86UP2 1357 aaKnown RBP21.87■■□□□ 1.09
SYDE2-202ENST00000341460 GNL2Q13823 731 aaKnown RBP21.86■■□□□ 1.09
SYDE2-202ENST00000341460 TPM3P06753 285 aa21.86■■□□□ 1.09
SYDE2-202ENST00000341460 CARMIL2Q6F5E8 1435 aa21.85■■□□□ 1.09
SYDE2-202ENST00000341460 RRP9O43818 475 aaKnown RBP21.85■■□□□ 1.09
SYDE2-202ENST00000341460 PMFBP1Q8TBY8 1022 aa21.84■■□□□ 1.09
SYDE2-202ENST00000341460 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
SYDE2-202ENST00000341460 STK26Q9P289 416 aa21.83■■□□□ 1.09
SYDE2-202ENST00000341460 VPS8Q8N3P4 1428 aa21.83■■□□□ 1.08
SYDE2-202ENST00000341460 R3HCC1Q9Y3T6 440 aaKnown RBP21.83■■□□□ 1.08
SYDE2-202ENST00000341460 FOXD4L1Q9NU39 408 aa21.82■■□□□ 1.08
SYDE2-202ENST00000341460 CWC15Q9P013 229 aaKnown RBP21.82■■□□□ 1.08
SYDE2-202ENST00000341460 KIAA1211Q6ZU35 1233 aa21.81■■□□□ 1.08
SYDE2-202ENST00000341460 CCAR2Q8N163 923 aaKnown RBP21.81■■□□□ 1.08
SYDE2-202ENST00000341460 PATL2C9JE40 543 aaKnown RBP21.81■■□□□ 1.08
SYDE2-202ENST00000341460 ZNF592Q92610 1267 aa21.8■■□□□ 1.08
SYDE2-202ENST00000341460 FAM161AQ3B820 660 aa21.8■■□□□ 1.08
SYDE2-202ENST00000341460 BRPF3Q9ULD4 1205 aa21.8■■□□□ 1.08
SYDE2-202ENST00000341460 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
SYDE2-202ENST00000341460 UBE2Q2Q8WVN8 375 aa21.79■■□□□ 1.08
SYDE2-202ENST00000341460 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
SYDE2-202ENST00000341460 SMARCA2P51531 1590 aa21.77■■□□□ 1.08
SYDE2-202ENST00000341460 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
SYDE2-202ENST00000341460 RALBP1Q15311 655 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms