RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MADDQ8WXG6 1647 aa21.33■■□□□ 1.01
NECTIN1-203ENST00000341398 CLIP1P30622 1438 aa21.33■■□□□ 1.01
NECTIN1-203ENST00000341398 ZFYVE16Q7Z3T8 1539 aa21.33■■□□□ 1
NECTIN1-203ENST00000341398 KIF14Q15058 1648 aa21.3■■□□□ 1
NECTIN1-203ENST00000341398 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
NECTIN1-203ENST00000341398 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
NECTIN1-203ENST00000341398 YEATS2Q9ULM3 1422 aa21.27■■□□□ 1
NECTIN1-203ENST00000341398 MLECQ14165 292 aa21.24■□□□□ 0.99
NECTIN1-203ENST00000341398 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
NECTIN1-203ENST00000341398 ARHGAP5Q13017 1502 aa21.24■□□□□ 0.99
NECTIN1-203ENST00000341398 ATP10AO60312 1499 aa21.24■□□□□ 0.99
NECTIN1-203ENST00000341398 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
NECTIN1-203ENST00000341398 CCDC18Q5T9S5 1454 aa21.22■□□□□ 0.99
NECTIN1-203ENST00000341398 CASKIN1Q8WXD9 1431 aa21.22■□□□□ 0.99
NECTIN1-203ENST00000341398 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
NECTIN1-203ENST00000341398 LRRIQ1Q96JM4 1722 aa21.22■□□□□ 0.99
NECTIN1-203ENST00000341398 ZNF518AQ6AHZ1 1483 aa21.22■□□□□ 0.99
NECTIN1-203ENST00000341398 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
NECTIN1-203ENST00000341398 FER1L4A9Z1Z3 1794 aa21.19■□□□□ 0.98
NECTIN1-203ENST00000341398 AFAP1Q8N556 730 aa21.18■□□□□ 0.98
NECTIN1-203ENST00000341398 LMTK3Q96Q04 1460 aa21.17■□□□□ 0.98
NECTIN1-203ENST00000341398 SIGLEC1Q9BZZ2 1709 aa21.16■□□□□ 0.98
NECTIN1-203ENST00000341398 CDC42BPBQ9Y5S2 1711 aa21.16■□□□□ 0.98
NECTIN1-203ENST00000341398 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
NECTIN1-203ENST00000341398 KDM5CP41229 1560 aa21.12■□□□□ 0.97
NECTIN1-203ENST00000341398 PREX2Q70Z35 1606 aa21.11■□□□□ 0.97
NECTIN1-203ENST00000341398 HSPA2P54652 639 aa21.1■□□□□ 0.97
NECTIN1-203ENST00000341398 ARHGEF12Q9NZN5 1544 aa21.1■□□□□ 0.97
NECTIN1-203ENST00000341398 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
NECTIN1-203ENST00000341398 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
NECTIN1-203ENST00000341398 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
NECTIN1-203ENST00000341398 CDC42BPAQ5VT25 1732 aa21.07■□□□□ 0.96
NECTIN1-203ENST00000341398 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
NECTIN1-203ENST00000341398 ABCC1P33527 1531 aa21.06■□□□□ 0.96
NECTIN1-203ENST00000341398 REREQ9P2R6 1566 aa21.05■□□□□ 0.96
NECTIN1-203ENST00000341398 DIP2CQ9Y2E4 1556 aa21.05■□□□□ 0.96
NECTIN1-203ENST00000341398 ITSN2Q9NZM3 1697 aa21.05■□□□□ 0.96
NECTIN1-203ENST00000341398 TRAPPC8Q9Y2L5 1435 aa21.04■□□□□ 0.96
NECTIN1-203ENST00000341398 CEBPAP49715 358 aaPredicted RBP21.04■□□□□ 0.96
NECTIN1-203ENST00000341398 PREX1Q8TCU6 1659 aa21.02■□□□□ 0.96
NECTIN1-203ENST00000341398 ABCA6Q8N139 1617 aa21.01■□□□□ 0.95
NECTIN1-203ENST00000341398 AGLP35573 1532 aa20.99■□□□□ 0.95
NECTIN1-203ENST00000341398 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
NECTIN1-203ENST00000341398 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
NECTIN1-203ENST00000341398 CCNB3Q8WWL7 1395 aa20.98■□□□□ 0.95
NECTIN1-203ENST00000341398 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
NECTIN1-203ENST00000341398 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
NECTIN1-203ENST00000341398 KIDINS220Q9ULH0 1771 aa20.97■□□□□ 0.95
NECTIN1-203ENST00000341398 SPAG9O60271 1321 aaKnown RBP20.97■□□□□ 0.95
NECTIN1-203ENST00000341398 HNRNPMP52272 730 aaKnown RBP eCLIP20.97■□□□□ 0.95
NECTIN1-203ENST00000341398 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
NECTIN1-203ENST00000341398 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
NECTIN1-203ENST00000341398 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
NECTIN1-203ENST00000341398 CNTLNQ9NXG0 1405 aa20.93■□□□□ 0.94
NECTIN1-203ENST00000341398 KIAA1107Q9UPP5 1409 aa20.93■□□□□ 0.94
NECTIN1-203ENST00000341398 SYCP2Q9BX26 1530 aa20.92■□□□□ 0.94
NECTIN1-203ENST00000341398 C3P01024 1663 aa20.91■□□□□ 0.94
NECTIN1-203ENST00000341398 ILDR2Q71H61 639 aa20.91■□□□□ 0.94
NECTIN1-203ENST00000341398 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
NECTIN1-203ENST00000341398 SOCS7O14512 581 aa20.87■□□□□ 0.93
NECTIN1-203ENST00000341398 SUPT6HQ7KZ85 1726 aaKnown RBP20.87■□□□□ 0.93
NECTIN1-203ENST00000341398 ATP7AQ04656 1500 aa20.86■□□□□ 0.93
NECTIN1-203ENST00000341398 DISP3Q9P2K9 1392 aa20.86■□□□□ 0.93
NECTIN1-203ENST00000341398 CEP162Q5TB80 1403 aa20.85■□□□□ 0.93
NECTIN1-203ENST00000341398 EHBP1L1Q8N3D4 1523 aa20.85■□□□□ 0.93
NECTIN1-203ENST00000341398 STRCQ7RTU9 1775 aa20.83■□□□□ 0.93
NECTIN1-203ENST00000341398 MROH2AA6NES4 1674 aa20.83■□□□□ 0.92
NECTIN1-203ENST00000341398 A2MP01023 1474 aa20.82■□□□□ 0.92
NECTIN1-203ENST00000341398 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
NECTIN1-203ENST00000341398 ZMYM3Q14202 1370 aa20.82■□□□□ 0.92
NECTIN1-203ENST00000341398 GGT6Q6P531 493 aa20.81■□□□□ 0.92
NECTIN1-203ENST00000341398 INO80Q9ULG1 1556 aaPredicted RBP20.81■□□□□ 0.92
NECTIN1-203ENST00000341398 NPATQ14207 1427 aa20.8■□□□□ 0.92
NECTIN1-203ENST00000341398 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
NECTIN1-203ENST00000341398 TIAM1Q13009 1591 aa20.79■□□□□ 0.92
NECTIN1-203ENST00000341398 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
NECTIN1-203ENST00000341398 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
NECTIN1-203ENST00000341398 PTPRTO14522 1441 aa20.77■□□□□ 0.92
NECTIN1-203ENST00000341398 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
NECTIN1-203ENST00000341398 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
NECTIN1-203ENST00000341398 CLTCQ00610 1675 aaKnown RBP20.76■□□□□ 0.91
NECTIN1-203ENST00000341398 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
NECTIN1-203ENST00000341398 DHX29Q7Z478 1369 aaKnown RBP20.71■□□□□ 0.91
NECTIN1-203ENST00000341398 NCOA2Q15596 1464 aa20.71■□□□□ 0.91
NECTIN1-203ENST00000341398 NCOA1Q15788 1441 aa20.7■□□□□ 0.9
NECTIN1-203ENST00000341398 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
NECTIN1-203ENST00000341398 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
NECTIN1-203ENST00000341398 SPATA31D1Q6ZQQ2 1576 aa20.7■□□□□ 0.9
NECTIN1-203ENST00000341398 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
NECTIN1-203ENST00000341398 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
NECTIN1-203ENST00000341398 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
NECTIN1-203ENST00000341398 KIF3BO15066 747 aa20.67■□□□□ 0.9
NECTIN1-203ENST00000341398 PTPRKQ15262 1439 aa20.67■□□□□ 0.9
NECTIN1-203ENST00000341398 CAMSAP2Q08AD1 1489 aa20.66■□□□□ 0.9
NECTIN1-203ENST00000341398 PKD2Q13563 968 aa20.66■□□□□ 0.9
NECTIN1-203ENST00000341398 VPS8Q8N3P4 1428 aa20.65■□□□□ 0.9
NECTIN1-203ENST00000341398 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
NECTIN1-203ENST00000341398 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
NECTIN1-203ENST00000341398 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
NECTIN1-203ENST00000341398 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms